ENST00000445346.1
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000445346.1 |
Source |
Gencode19 |
Same with |
lnc-AL713998.1-1:1,NONHSAT113402 |
Classification |
intergenic |
Length |
674 nt |
Genomic location |
chr6-:68936864..69039791 |
Exon number |
4 |
Exons |
68936864..68937184,68976392..68976507,69036837..69036964,69039683..69039791 |
Genome context |
|
Sequence |
000001 TCACAAGGGA AAGCATATGT AGATTGAAGC TATGCAGAAT GAAGTCTCAA CAGCTGAAGC TTACTGGGGA ACCAATGGTG 000080
000081 CCCTAAATTA AGATAATTTA TGAAATGTTG GTCTCCCTCT GTTGCTGCCC AGGCTCCAGG CTGAAGTGCA GAGGCATGAT 000160 000161 CTTGGCTCAC TGCCGCCTCC TCTTCCCAGG CTCAAGCGAT CCTCCCACAT TTGCCTCCTG AGTAGCTGAG ACTACAGTCT 000240 000241 TGCCTTGTCA CCCAGGCTGG AGTGCAATGG CACAATCTCG GCTCACTGCA ATCTCTGCCT CCCAGGTTCA AGTGATTCTT 000320 000321 CTGCCTCAGC CTCCCAAGCA ACTGGGACTA CAGCCCCTGA AAAGTAGCAG CAATGTGCCC TGCAACAGAA TCTGCACACT 000400 000401 ACAGAGATAC TACAAAAGCT ACCATGAAGA AGCTACATAG ATGATCACTG GGTTGTACCT CTCAAGTACT TTCTCAGAAG 000480 000481 CCACATCCAT GTTATTGCTG AGAGTACATG CTTTGCTATA AACCCTAACT GGGTTGAATC CTGGCTGTGC CACTTAGTAG 000560 000561 CTAAGAGATT TTGACCAAAT CACTGGCAGA GACCTTTGTC CCCTTGTCTA TGAAATAAAA TAAAAATAGC TACCGCTCTG 000640 000641 AGATTTTTCA ATAAAACCTG TTAAATTTTA CAAG |
Predicted Small Protein
Name | ENST00000445346.1_smProtein_266:439 |
Length | 58 |
Molecular weight | 6387.3283 |
Aromaticity | 0.0526315789474 |
Instability index | 81.4403508772 |
Isoelectric point | 9.50970458984 |
Runs | 7 |
Runs residual | 0.0311403508772 |
Runs probability | 0.0307997072704 |
Amino acid sequence | MAQSRLTAISASQVQVILLPQPPKQLGLQPLKSSSNVPCNRICTLQRYYKSYHEEAT |
Secondary structure | LLLLLLEEELLLLLEEEELLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHLLL |
PRMN | - |
PiMo | - |