ENST00000445346.1

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

ENST00000445346.1

Source

Gencode19

Same with

lnc-AL713998.1-1:1,NONHSAT113402

Classification

intergenic

Length

674 nt

Genomic location

chr6-:68936864..69039791

Exon number

4

Exons

68936864..68937184,68976392..68976507,69036837..69036964,69039683..69039791

Genome context

Sequence
000001 TCACAAGGGA AAGCATATGT AGATTGAAGC TATGCAGAAT GAAGTCTCAA CAGCTGAAGC TTACTGGGGA ACCAATGGTG 000080
000081 CCCTAAATTA AGATAATTTA TGAAATGTTG GTCTCCCTCT GTTGCTGCCC AGGCTCCAGG CTGAAGTGCA GAGGCATGAT 000160
000161 CTTGGCTCAC TGCCGCCTCC TCTTCCCAGG CTCAAGCGAT CCTCCCACAT TTGCCTCCTG AGTAGCTGAG ACTACAGTCT 000240
000241 TGCCTTGTCA CCCAGGCTGG AGTGCAATGG CACAATCTCG GCTCACTGCA ATCTCTGCCT CCCAGGTTCA AGTGATTCTT 000320
000321 CTGCCTCAGC CTCCCAAGCA ACTGGGACTA CAGCCCCTGA AAAGTAGCAG CAATGTGCCC TGCAACAGAA TCTGCACACT 000400
000401 ACAGAGATAC TACAAAAGCT ACCATGAAGA AGCTACATAG ATGATCACTG GGTTGTACCT CTCAAGTACT TTCTCAGAAG 000480
000481 CCACATCCAT GTTATTGCTG AGAGTACATG CTTTGCTATA AACCCTAACT GGGTTGAATC CTGGCTGTGC CACTTAGTAG 000560
000561 CTAAGAGATT TTGACCAAAT CACTGGCAGA GACCTTTGTC CCCTTGTCTA TGAAATAAAA TAAAAATAGC TACCGCTCTG 000640
000641 AGATTTTTCA ATAAAACCTG TTAAATTTTA CAAG
[back to top]

Predicted Small Protein

Name ENST00000445346.1_smProtein_266:439
Length 58
Molecular weight 6387.3283
Aromaticity 0.0526315789474
Instability index 81.4403508772
Isoelectric point 9.50970458984
Runs 7
Runs residual 0.0311403508772
Runs probability 0.0307997072704
Amino acid sequence MAQSRLTAISASQVQVILLPQPPKQLGLQPLKSSSNVPCNRICTLQRYYKSYHEEAT
Secondary structure LLLLLLEEELLLLLEEEELLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHLLL
PRMN -
PiMo -