Difference between revisions of "ENST00000501715.2"

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sequence = <dnaseq>ACAGGTACGTGGGCGGGCGGATCGTGGTGGCTGCGCTTGCGAGGACCCTGAGGTAGATTGGGTGGTTTCAACAGGAACGCATCCACTGTCTGAGAGTTTAAACTTGATTTTGTGAGGGGACGAACAGCGTGACAATTAAAAGAAGATCTGGGAATCAAAAGCTTCCTGAGGCCTTCACCAGAAGCAGATGCTGGTGCCGTGCTTCTACAGCCTGCAGAACTAAGAGAAGACATGGAGAAGAGGAGGGAGTAGTTGTGACCGTGGAGGCAGAGAATGGAGTAATGTGATCATAAATCAAGGAATGCTGACAGCCACTAAAGCTGGAGAAGGCCAAGGACAGATATTCAATCCTCCCGTAGAAGTACAGCCCTGCTAATGCATTGATTTTGGACTTCTGGCCTCAGAACTATTTATATATCAGCTTTTTATCAGTTGAAATAAACCACCCTGGGCCGGGTGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGTCTGGAAAGCATGGAAATTTGTATCTTCATTCACTTTTGTTTTCATGGACTCTTTTCATGTTTGAACTTTTCATGATCCAATGTGATAATTTATGTGAAATCTTTCTGCAAACTATACAGTATGATAAAAATATAAGGTAGTTTCACTGGAAACAACAGAAGACTAGAAGCTGATGTGACGTGGCAATATCAACCAGGAATACCCATCTCGAGTTCTGGATATGTGCTCTGAGAAGGTGCCCATGTCACCGACCACACTGGAGGCCAATGCAGATACTGGGGGAAGGTTCCATGGTAGCTAAGTGTGGACAAGCTAATCACTGAAGTTCCCTGATGCAGAGTTGATAATCTCTCTAGAGTTGGATGAAAGACTGTGCTGCCTTGAAGCTCTGAGAGATGCCATGCCAATTCAAGGCAGGGTCTTTATTGTTGAAACTCTTGCGTAATGACATCTTTATTCAGGTGAAAATACAGGATGAATTTCAACTATATGATATTGTTTATGTTCCTCAGACATGTTATTTGTCTTTACAAAGATTGGTTTCAATAAACTGTGTGACTGATATTAAATAAACATGGAATTTTACACATTCATAATA</dnaseq>|
 
sequence = <dnaseq>ACAGGTACGTGGGCGGGCGGATCGTGGTGGCTGCGCTTGCGAGGACCCTGAGGTAGATTGGGTGGTTTCAACAGGAACGCATCCACTGTCTGAGAGTTTAAACTTGATTTTGTGAGGGGACGAACAGCGTGACAATTAAAAGAAGATCTGGGAATCAAAAGCTTCCTGAGGCCTTCACCAGAAGCAGATGCTGGTGCCGTGCTTCTACAGCCTGCAGAACTAAGAGAAGACATGGAGAAGAGGAGGGAGTAGTTGTGACCGTGGAGGCAGAGAATGGAGTAATGTGATCATAAATCAAGGAATGCTGACAGCCACTAAAGCTGGAGAAGGCCAAGGACAGATATTCAATCCTCCCGTAGAAGTACAGCCCTGCTAATGCATTGATTTTGGACTTCTGGCCTCAGAACTATTTATATATCAGCTTTTTATCAGTTGAAATAAACCACCCTGGGCCGGGTGCAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGTCTGGAAAGCATGGAAATTTGTATCTTCATTCACTTTTGTTTTCATGGACTCTTTTCATGTTTGAACTTTTCATGATCCAATGTGATAATTTATGTGAAATCTTTCTGCAAACTATACAGTATGATAAAAATATAAGGTAGTTTCACTGGAAACAACAGAAGACTAGAAGCTGATGTGACGTGGCAATATCAACCAGGAATACCCATCTCGAGTTCTGGATATGTGCTCTGAGAAGGTGCCCATGTCACCGACCACACTGGAGGCCAATGCAGATACTGGGGGAAGGTTCCATGGTAGCTAAGTGTGGACAAGCTAATCACTGAAGTTCCCTGATGCAGAGTTGATAATCTCTCTAGAGTTGGATGAAAGACTGTGCTGCCTTGAAGCTCTGAGAGATGCCATGCCAATTCAAGGCAGGGTCTTTATTGTTGAAACTCTTGCGTAATGACATCTTTATTCAGGTGAAAATACAGGATGAATTTCAACTATATGATATTGTTTATGTTCCTCAGACATGTTATTTGTCTTTACAAAGATTGGTTTCAATAAACTGTGTGACTGATATTAAATAAACATGGAATTTTACACATTCATAATA</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:lnc-RASA1-3]][[Category:NONHSAG040958]]
+
[[Category:Intergenic]][[Category:lnc-RASA1-3]][[Category:NONHSAG040958]][[Category:ENSG00000247828.3]]

Revision as of 18:43, 15 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000501715.2

Source

Gencode19

Same with

lnc-RASA1-3:5,NONHSAT102616

Classification

intergenic

Length

1101 nt

Genomic location

chr5+:87564841..87732491

Exon number

8

Exons

87564841..87564936,87566343..87566402,87577859..87577923,87583253..87583439,87587201..87587293,87588385..87588460,87705890..87706011,87732090..87732491

Genome context

Sequence
000001 ACAGGTACGT GGGCGGGCGG ATCGTGGTGG CTGCGCTTGC GAGGACCCTG AGGTAGATTG GGTGGTTTCA ACAGGAACGC 000080
000081 ATCCACTGTC TGAGAGTTTA AACTTGATTT TGTGAGGGGA CGAACAGCGT GACAATTAAA AGAAGATCTG GGAATCAAAA 000160
000161 GCTTCCTGAG GCCTTCACCA GAAGCAGATG CTGGTGCCGT GCTTCTACAG CCTGCAGAAC TAAGAGAAGA CATGGAGAAG 000240
000241 AGGAGGGAGT AGTTGTGACC GTGGAGGCAG AGAATGGAGT AATGTGATCA TAAATCAAGG AATGCTGACA GCCACTAAAG 000320
000321 CTGGAGAAGG CCAAGGACAG ATATTCAATC CTCCCGTAGA AGTACAGCCC TGCTAATGCA TTGATTTTGG ACTTCTGGCC 000400
000401 TCAGAACTAT TTATATATCA GCTTTTTATC AGTTGAAATA AACCACCCTG GGCCGGGTGC AGTGGCTCAC ACCTGTAATC 000480
000481 CCAGCACTTT GGGAGGCCGA GGTCTGGAAA GCATGGAAAT TTGTATCTTC ATTCACTTTT GTTTTCATGG ACTCTTTTCA 000560
000561 TGTTTGAACT TTTCATGATC CAATGTGATA ATTTATGTGA AATCTTTCTG CAAACTATAC AGTATGATAA AAATATAAGG 000640
000641 TAGTTTCACT GGAAACAACA GAAGACTAGA AGCTGATGTG ACGTGGCAAT ATCAACCAGG AATACCCATC TCGAGTTCTG 000720
000721 GATATGTGCT CTGAGAAGGT GCCCATGTCA CCGACCACAC TGGAGGCCAA TGCAGATACT GGGGGAAGGT TCCATGGTAG 000800
000801 CTAAGTGTGG ACAAGCTAAT CACTGAAGTT CCCTGATGCA GAGTTGATAA TCTCTCTAGA GTTGGATGAA AGACTGTGCT 000880
000881 GCCTTGAAGC TCTGAGAGAT GCCATGCCAA TTCAAGGCAG GGTCTTTATT GTTGAAACTC TTGCGTAATG ACATCTTTAT 000960
000961 TCAGGTGAAA ATACAGGATG AATTTCAACT ATATGATATT GTTTATGTTC CTCAGACATG TTATTTGTCT TTACAAAGAT 001040
001041 TGGTTTCAAT AAACTGTGTG ACTGATATTA AATAAACATG GAATTTTACA CATTCATAAT A
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