Difference between revisions of "ENST00000501818.1"
| Line 42: | Line 42: | ||
sequence = <dnaseq>ACAGCAGTGTGTTTCCCAGTAAAGAAAATAGGATGCGGCCGTGCGCAGTGACTTACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACCTGAGCTTCACGGAGCTACCTGAGTCAGCGCCTGCATCTCCACCACCATCATCATCGTCACTGTCTTCATCGCCTCTGGGCTGGACCAGCCCCTGCCTGTGAGCTCCCTGGAGCCAGAGGTGCAAAGTCTGCAATGACACAAAAAGCCAGCACGCTGGGAGGGGCTCTGGAGACCATCTCATTGTTCATTCATTTGTCTATTCAATCCATTTTATTGACTGCTCACTGTGTGCCAGACACATGGGCCCTGGAGATACAGAAGAAACACGTGAGGTCCCTGCCCTCCAGGAATTAAGAAGATAAAGTCAAAAGTGCTGTAAAGAACAACAGGATGATGGGCCAGTATTTGAAGAGGTCGTTTTCAGATGGGGTGGGCAGGGAAGGCATGTCTGAGAAAGGAATCTTTGTGGACACCTTAATGCTTAGGACATGGGGCTGAGAAAAGCAGGCAGAGGAATTTCAGATAACGCCTCAGTTGGTAAAAAGCTAGGGGGATGGTGCAGGCAAGGAATAGAAGGAAGGACAGTGTGGTGGGAGTTTGGTGGTGAGTGAAAGAGGGGCCTGGGGACCGTGCACACTTGAAGGCTGTAGCCGGGCATCTGGCTTGGATTTTGAGGACTGAGGGGACCATTACAGGGCTTTAGGCATGGGGATGGCACGATCCAATTTACATTTTTCATGTCATTCCATCTGCTTCCTGGAGAACACATGATAGGAAGAAGGAACGTGGAAGCAGGGAGACCAGTGAGGTGGTAACTCCAGAAACAAAGAGGTGGCGGCTGATGGGGCGAGTGGGAGGAGCCTGACCCTGGTGGATTTTGGAGGCACAGAAGGCAAACCTGCTGGGGGATTGTCTGTGGGGGACAGGGAGAGCAAAGACTGGGTGCCTTCCTCTTCCTGCCTTCCTCTTCCCGCTTTGCACCCCTTCTGGCCTGAATCATCTCCCTCAGGTAACTAAGAGGAGGGGGCAAAGGACTCCAGACTATGTAGCCAGATATAGCCCCAGGTCCCCAGGGCTATATCTTGGGTCTGTGCAGAAACTAGGGACGTGGGGGCCAGAGGTATTTTTAGCCTTCTAGCTCTCTCCTTCTGTCTTCTGCAATCCCTCTCCCTACCCCCTTCCCCCTTCTTCTCTCCTTCTCCCTTCCCTCTCCAGCTCCTTCCCCCACCTCCTGCTCCTCTTTCTCTCTCTCTCACACACACATACACACACACACACACATACACACACACACACACACACACACACACACACGAAGCAGCCTTATCAGGAGGAAGCCTCCAGCAGAGACAAGCGGTCTCCAGGGACAGAGCAGAGGAGCTGACAGGAGTTTCCGGAGCAGGGGGAGGCTGACTTCCCTGCCTTCCCCATTCCTTCCAGCTCCCACTGCCTCTCGCTTCCTGCAGCATTTCTCTCCAGACGCGCGCTTCTCAACTGGAGGCCACTTTGTCTTCCTGGGACATTTGGCAATATCTGGAAACATTGTTGGTTGTCATAACTGAGGAGGGGGCAGGGTTGGCATGGAGTGGGTAGAGACCAGAGATGCACAGGACAGCCCCCATAACAAAGAATGATCGGCGCCAACAGTGCTGAGAGCCCTCCCTAGGCTCTGCCGGCAGAGCTGGAAGGGACTGTCCTCTTCCTTGTGGTCCCACTATCACCACACTGGCCACACTGTCCCTGCATTATCTCTATTGGTCTTCTCAGCCACACTGTGAGGTACATAGTATTATTCACCCAAGGTCATGCAGGCAGTAAGAGGCAGAGCTGGGATTAAGACTGTGAAGCCTGTGGTTTAACTGGTCTCTCTCTACTGAAGGGGTTGTCACAGCCTGTGTCATTGTTATTAGCAATGGGACACGCTGTCTCAAGTGAAGTCTTATTCAGAAGTCCAATGTAAGTCCACTGTGTAAGACAGAGAGCGTAGAACTGCCTAGGGTGAAGCAGTGTGGGAGGTTATGAACCCCCTGGGCCCACCCCTCTTCCCACCTTATGGAGCCTCCAAAAGCCATCTGTCTAGCCGGGCAGGGCCCCTGTGGAGGGCTGCACAGGTTGTGCACTGCAAAACTCTAGGAGAGGCCACTCCCATGGGCTTCTTCGTGGGGCCTGTTGAGGTAAGGCAGAGCTCCTTTAGGGAAGGGTGGCAAATGGGATTTCTCCCATTGCAGACATGTGTTGCTTAGCAGACAAGGTGTCACGGTAGCCTAATAAGGTCTGGAGTAGGAAAGCGGGATGAGAGTGGCTGAGTGGCCAGCATCTGCCTTCCTGGTCCTAAAATATGGAGAATAGAAAATAGAATTGGAGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGTCGAGGTGGGCAGATCACCAGGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGAAACCCCGTCTGTACTAAAAATACAAAACAATTAGCCGGGCGTGGCGGCATGTGCCTGTTGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTGGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGTAACAGAGCAAGACTCCATCTC</dnaseq>| | sequence = <dnaseq>ACAGCAGTGTGTTTCCCAGTAAAGAAAATAGGATGCGGCCGTGCGCAGTGACTTACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGTGGATCACCTGAGCTTCACGGAGCTACCTGAGTCAGCGCCTGCATCTCCACCACCATCATCATCGTCACTGTCTTCATCGCCTCTGGGCTGGACCAGCCCCTGCCTGTGAGCTCCCTGGAGCCAGAGGTGCAAAGTCTGCAATGACACAAAAAGCCAGCACGCTGGGAGGGGCTCTGGAGACCATCTCATTGTTCATTCATTTGTCTATTCAATCCATTTTATTGACTGCTCACTGTGTGCCAGACACATGGGCCCTGGAGATACAGAAGAAACACGTGAGGTCCCTGCCCTCCAGGAATTAAGAAGATAAAGTCAAAAGTGCTGTAAAGAACAACAGGATGATGGGCCAGTATTTGAAGAGGTCGTTTTCAGATGGGGTGGGCAGGGAAGGCATGTCTGAGAAAGGAATCTTTGTGGACACCTTAATGCTTAGGACATGGGGCTGAGAAAAGCAGGCAGAGGAATTTCAGATAACGCCTCAGTTGGTAAAAAGCTAGGGGGATGGTGCAGGCAAGGAATAGAAGGAAGGACAGTGTGGTGGGAGTTTGGTGGTGAGTGAAAGAGGGGCCTGGGGACCGTGCACACTTGAAGGCTGTAGCCGGGCATCTGGCTTGGATTTTGAGGACTGAGGGGACCATTACAGGGCTTTAGGCATGGGGATGGCACGATCCAATTTACATTTTTCATGTCATTCCATCTGCTTCCTGGAGAACACATGATAGGAAGAAGGAACGTGGAAGCAGGGAGACCAGTGAGGTGGTAACTCCAGAAACAAAGAGGTGGCGGCTGATGGGGCGAGTGGGAGGAGCCTGACCCTGGTGGATTTTGGAGGCACAGAAGGCAAACCTGCTGGGGGATTGTCTGTGGGGGACAGGGAGAGCAAAGACTGGGTGCCTTCCTCTTCCTGCCTTCCTCTTCCCGCTTTGCACCCCTTCTGGCCTGAATCATCTCCCTCAGGTAACTAAGAGGAGGGGGCAAAGGACTCCAGACTATGTAGCCAGATATAGCCCCAGGTCCCCAGGGCTATATCTTGGGTCTGTGCAGAAACTAGGGACGTGGGGGCCAGAGGTATTTTTAGCCTTCTAGCTCTCTCCTTCTGTCTTCTGCAATCCCTCTCCCTACCCCCTTCCCCCTTCTTCTCTCCTTCTCCCTTCCCTCTCCAGCTCCTTCCCCCACCTCCTGCTCCTCTTTCTCTCTCTCTCACACACACATACACACACACACACACATACACACACACACACACACACACACACACACACGAAGCAGCCTTATCAGGAGGAAGCCTCCAGCAGAGACAAGCGGTCTCCAGGGACAGAGCAGAGGAGCTGACAGGAGTTTCCGGAGCAGGGGGAGGCTGACTTCCCTGCCTTCCCCATTCCTTCCAGCTCCCACTGCCTCTCGCTTCCTGCAGCATTTCTCTCCAGACGCGCGCTTCTCAACTGGAGGCCACTTTGTCTTCCTGGGACATTTGGCAATATCTGGAAACATTGTTGGTTGTCATAACTGAGGAGGGGGCAGGGTTGGCATGGAGTGGGTAGAGACCAGAGATGCACAGGACAGCCCCCATAACAAAGAATGATCGGCGCCAACAGTGCTGAGAGCCCTCCCTAGGCTCTGCCGGCAGAGCTGGAAGGGACTGTCCTCTTCCTTGTGGTCCCACTATCACCACACTGGCCACACTGTCCCTGCATTATCTCTATTGGTCTTCTCAGCCACACTGTGAGGTACATAGTATTATTCACCCAAGGTCATGCAGGCAGTAAGAGGCAGAGCTGGGATTAAGACTGTGAAGCCTGTGGTTTAACTGGTCTCTCTCTACTGAAGGGGTTGTCACAGCCTGTGTCATTGTTATTAGCAATGGGACACGCTGTCTCAAGTGAAGTCTTATTCAGAAGTCCAATGTAAGTCCACTGTGTAAGACAGAGAGCGTAGAACTGCCTAGGGTGAAGCAGTGTGGGAGGTTATGAACCCCCTGGGCCCACCCCTCTTCCCACCTTATGGAGCCTCCAAAAGCCATCTGTCTAGCCGGGCAGGGCCCCTGTGGAGGGCTGCACAGGTTGTGCACTGCAAAACTCTAGGAGAGGCCACTCCCATGGGCTTCTTCGTGGGGCCTGTTGAGGTAAGGCAGAGCTCCTTTAGGGAAGGGTGGCAAATGGGATTTCTCCCATTGCAGACATGTGTTGCTTAGCAGACAAGGTGTCACGGTAGCCTAATAAGGTCTGGAGTAGGAAAGCGGGATGAGAGTGGCTGAGTGGCCAGCATCTGCCTTCCTGGTCCTAAAATATGGAGAATAGAAAATAGAATTGGAGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGTCGAGGTGGGCAGATCACCAGGTCAGGAGATCAAGACCATCCTGGCTAACACGGTGAAACCCCGTCTGTACTAAAAATACAAAACAATTAGCCGGGCGTGGCGGCATGTGCCTGTTGTCCCAGCTACTCAGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCAGAGCTGGCAGTGAGCCGAGATCGTGCCACTGCACTCCAGCCTGGGTAACAGAGCAAGACTCCATCTC</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Antisense]][[Category:lnc-CCNJL-1]] | + | [[Category:Antisense]][[Category:lnc-CCNJL-1]][[Category:NONHSAG042092]] |
Revision as of 15:02, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
ENST00000501818.1 |
| Source |
Gencode19 |
| Same with |
lnc-CCNJL-1:1,NONHSAT104839 |
| Classification |
antisense |
| Length |
2686 nt |
| Genomic location |
chr5-:159623598..159631833 |
| Exon number |
2 |
| Exons |
159623598..159626178,159631729..159631833 |
| Genome context |
|
| Sequence |
000001 ACAGCAGTGT GTTTCCCAGT AAAGAAAATA GGATGCGGCC GTGCGCAGTG ACTTACACCT GTAATCCCAG CACTTTGGGA 000080
000081 GGCCGAGGCG GGTGGATCAC CTGAGCTTCA CGGAGCTACC TGAGTCAGCG CCTGCATCTC CACCACCATC ATCATCGTCA 000160 000161 CTGTCTTCAT CGCCTCTGGG CTGGACCAGC CCCTGCCTGT GAGCTCCCTG GAGCCAGAGG TGCAAAGTCT GCAATGACAC 000240 000241 AAAAAGCCAG CACGCTGGGA GGGGCTCTGG AGACCATCTC ATTGTTCATT CATTTGTCTA TTCAATCCAT TTTATTGACT 000320 000321 GCTCACTGTG TGCCAGACAC ATGGGCCCTG GAGATACAGA AGAAACACGT GAGGTCCCTG CCCTCCAGGA ATTAAGAAGA 000400 000401 TAAAGTCAAA AGTGCTGTAA AGAACAACAG GATGATGGGC CAGTATTTGA AGAGGTCGTT TTCAGATGGG GTGGGCAGGG 000480 000481 AAGGCATGTC TGAGAAAGGA ATCTTTGTGG ACACCTTAAT GCTTAGGACA TGGGGCTGAG AAAAGCAGGC AGAGGAATTT 000560 000561 CAGATAACGC CTCAGTTGGT AAAAAGCTAG GGGGATGGTG CAGGCAAGGA ATAGAAGGAA GGACAGTGTG GTGGGAGTTT 000640 000641 GGTGGTGAGT GAAAGAGGGG CCTGGGGACC GTGCACACTT GAAGGCTGTA GCCGGGCATC TGGCTTGGAT TTTGAGGACT 000720 000721 GAGGGGACCA TTACAGGGCT TTAGGCATGG GGATGGCACG ATCCAATTTA CATTTTTCAT GTCATTCCAT CTGCTTCCTG 000800 000801 GAGAACACAT GATAGGAAGA AGGAACGTGG AAGCAGGGAG ACCAGTGAGG TGGTAACTCC AGAAACAAAG AGGTGGCGGC 000880 000881 TGATGGGGCG AGTGGGAGGA GCCTGACCCT GGTGGATTTT GGAGGCACAG AAGGCAAACC TGCTGGGGGA TTGTCTGTGG 000960 000961 GGGACAGGGA GAGCAAAGAC TGGGTGCCTT CCTCTTCCTG CCTTCCTCTT CCCGCTTTGC ACCCCTTCTG GCCTGAATCA 001040 001041 TCTCCCTCAG GTAACTAAGA GGAGGGGGCA AAGGACTCCA GACTATGTAG CCAGATATAG CCCCAGGTCC CCAGGGCTAT 001120 001121 ATCTTGGGTC TGTGCAGAAA CTAGGGACGT GGGGGCCAGA GGTATTTTTA GCCTTCTAGC TCTCTCCTTC TGTCTTCTGC 001200 001201 AATCCCTCTC CCTACCCCCT TCCCCCTTCT TCTCTCCTTC TCCCTTCCCT CTCCAGCTCC TTCCCCCACC TCCTGCTCCT 001280 001281 CTTTCTCTCT CTCTCACACA CACATACACA CACACACACA CATACACACA CACACACACA CACACACACA CACACGAAGC 001360 001361 AGCCTTATCA GGAGGAAGCC TCCAGCAGAG ACAAGCGGTC TCCAGGGACA GAGCAGAGGA GCTGACAGGA GTTTCCGGAG 001440 001441 CAGGGGGAGG CTGACTTCCC TGCCTTCCCC ATTCCTTCCA GCTCCCACTG CCTCTCGCTT CCTGCAGCAT TTCTCTCCAG 001520 001521 ACGCGCGCTT CTCAACTGGA GGCCACTTTG TCTTCCTGGG ACATTTGGCA ATATCTGGAA ACATTGTTGG TTGTCATAAC 001600 001601 TGAGGAGGGG GCAGGGTTGG CATGGAGTGG GTAGAGACCA GAGATGCACA GGACAGCCCC CATAACAAAG AATGATCGGC 001680 001681 GCCAACAGTG CTGAGAGCCC TCCCTAGGCT CTGCCGGCAG AGCTGGAAGG GACTGTCCTC TTCCTTGTGG TCCCACTATC 001760 001761 ACCACACTGG CCACACTGTC CCTGCATTAT CTCTATTGGT CTTCTCAGCC ACACTGTGAG GTACATAGTA TTATTCACCC 001840 001841 AAGGTCATGC AGGCAGTAAG AGGCAGAGCT GGGATTAAGA CTGTGAAGCC TGTGGTTTAA CTGGTCTCTC TCTACTGAAG 001920 001921 GGGTTGTCAC AGCCTGTGTC ATTGTTATTA GCAATGGGAC ACGCTGTCTC AAGTGAAGTC TTATTCAGAA GTCCAATGTA 002000 002001 AGTCCACTGT GTAAGACAGA GAGCGTAGAA CTGCCTAGGG TGAAGCAGTG TGGGAGGTTA TGAACCCCCT GGGCCCACCC 002080 002081 CTCTTCCCAC CTTATGGAGC CTCCAAAAGC CATCTGTCTA GCCGGGCAGG GCCCCTGTGG AGGGCTGCAC AGGTTGTGCA 002160 002161 CTGCAAAACT CTAGGAGAGG CCACTCCCAT GGGCTTCTTC GTGGGGCCTG TTGAGGTAAG GCAGAGCTCC TTTAGGGAAG 002240 002241 GGTGGCAAAT GGGATTTCTC CCATTGCAGA CATGTGTTGC TTAGCAGACA AGGTGTCACG GTAGCCTAAT AAGGTCTGGA 002320 002321 GTAGGAAAGC GGGATGAGAG TGGCTGAGTG GCCAGCATCT GCCTTCCTGG TCCTAAAATA TGGAGAATAG AAAATAGAAT 002400 002401 TGGAGGCCAG GCGCGGTGGC TCACGCCTGT AATCCCAGCA CTTTGGGAGG TCGAGGTGGG CAGATCACCA GGTCAGGAGA 002480 002481 TCAAGACCAT CCTGGCTAAC ACGGTGAAAC CCCGTCTGTA CTAAAAATAC AAAACAATTA GCCGGGCGTG GCGGCATGTG 002560 002561 CCTGTTGTCC CAGCTACTCA GGAGGCTGAG GCAGGAGAAT GGCGTGAACC CGGGAGGCAG AGCTGGCAGT GAGCCGAGAT 002640 002641 CGTGCCACTG CACTCCAGCC TGGGTAACAG AGCAAGACTC CATCTC |
