Difference between revisions of "ENST00000503188.1"

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sequence = <dnaseq>ACCTTGTCTCCAGCTGAGGCTGAGCGAGCACGCCTTTGTTTAGGGCCCCTTGTCTCGGCCTGTGTCAGAGCTTGCAGGGGCGTTGGGCCTCTCTCTGCAGGGAGGACTGGTTTTAGAGGACTCCCGCTTCCCCCAGTTGTATCAGTTCAGGTGTAAACCCGATATGCAATAGGATCCGGCGTGGTGTCCACACTCATTAGACACATGGCATCGTTTCCAAAGATACAGGCCCCCGCACTTCAGCTTGATGCCAGAGGGCTTACACGTAAACTCTGCTTGACTTGGAAATCAAAGAGAGGTGAGAAGAGTTCAGATTTTCTCCTGCTGAGGTAGGAGGCTCGCCAAGAGACAAGACTGGACTCATAAGGTCTGCAACTGGCTTTATCTAGTTAATAGCAGCCTTTGACATCACAAAACATGCTATTTCCTTGTGTTCATGTCTTTAAGAGGAGCCACGGTGAAAGCAAACATTAAAGATTTTAATCTAACAAAAATGTGGAGTGAAAGTAAGACATTTTACACCTGCTCTCTGCACTACTATTTCAGGAGGAGGTCGGTCGCTGATGTTGAAACTGTTATTCATAAATGTTTTCCATCTGTGTTTGTTTCTGATTTCTCATCTGCATCCGCAGTTATGCAATGTCCTCCAATGTTTGTCTCTTCTTCCTGAAATACGGTCTATTTCACATTGCACTGCCCATTTTCACAAGGCATCACTGGACTAGGGAGTCCTCAGAGAAAGCCAGGTATGGTTCAGCTGTTTCCTTTCCAGTGTATATGACACTTGGGAAAAAGACAGCTTGAGGGTAAATTTGCCTCATCGTTAGAGATACCTTATTAATATTAAGTCTGCAAAACAAGTCCTCTCTTTAATTCAACACTTCCAAAATGAACAAAGAGTTACAATGCCCTGCAGTAAAAGGCGACTTAATTGCATTTGGCCAATATTTATTTCGTGCACACTGTGTAAGACGCATTGAACTAGAGAGTATAAAAATTGGTAAATTACCATCTCTCAACTAAATAATCTTATGGTCTCATAACAGAAATAGGTTACAATGAATGTACAAATAACAATTTAAATAAAGATAATAATGAGATTTTTAAATGATTAAAGTTATTCTCCAAGAACACTTTAAACACAGTGCTTAAATTGTTTCTATTTATTGAGCTTCTACTACAATGAAGACTATATGGTAATTCTAGGATTAGAGACGCATGAGCAACACACACACACACACACACACACACACACACACACCCTGCCCCCAACTCACAAACAGTAGAAAGCATGTGACATTAAATAATTGCATCATTTAATTCTTGCAGCAACCGTGGTATTATAATCCCCCATTACACATGAGAGCACTCAGTGTAACCATAGGGAGTTGATCTGCTGCCAGCCACACTGAAGAGGCAGGGCATACTTCAGGTATCAGGGGTTGAGATTTGGCTATGAGAGCTAGAATGTCTGGTTCCAACTCCAGTTCCACAACATGAAAGCTGCGTGACACTGAGCAAGTCACTCAATAACTCTGTCTGAGTTTCCCCGCGCTGTAAAGGTTTGTTTTGAGAAGTGAATTAATCCTCATCTTGATCTACCTAGGGAGATCTAGTATACAAGAAATTCCTCTGTCATCTTTACTTTTTTTTAATCAAAAAGTTAAACAACTTCA</dnaseq>|
 
sequence = <dnaseq>ACCTTGTCTCCAGCTGAGGCTGAGCGAGCACGCCTTTGTTTAGGGCCCCTTGTCTCGGCCTGTGTCAGAGCTTGCAGGGGCGTTGGGCCTCTCTCTGCAGGGAGGACTGGTTTTAGAGGACTCCCGCTTCCCCCAGTTGTATCAGTTCAGGTGTAAACCCGATATGCAATAGGATCCGGCGTGGTGTCCACACTCATTAGACACATGGCATCGTTTCCAAAGATACAGGCCCCCGCACTTCAGCTTGATGCCAGAGGGCTTACACGTAAACTCTGCTTGACTTGGAAATCAAAGAGAGGTGAGAAGAGTTCAGATTTTCTCCTGCTGAGGTAGGAGGCTCGCCAAGAGACAAGACTGGACTCATAAGGTCTGCAACTGGCTTTATCTAGTTAATAGCAGCCTTTGACATCACAAAACATGCTATTTCCTTGTGTTCATGTCTTTAAGAGGAGCCACGGTGAAAGCAAACATTAAAGATTTTAATCTAACAAAAATGTGGAGTGAAAGTAAGACATTTTACACCTGCTCTCTGCACTACTATTTCAGGAGGAGGTCGGTCGCTGATGTTGAAACTGTTATTCATAAATGTTTTCCATCTGTGTTTGTTTCTGATTTCTCATCTGCATCCGCAGTTATGCAATGTCCTCCAATGTTTGTCTCTTCTTCCTGAAATACGGTCTATTTCACATTGCACTGCCCATTTTCACAAGGCATCACTGGACTAGGGAGTCCTCAGAGAAAGCCAGGTATGGTTCAGCTGTTTCCTTTCCAGTGTATATGACACTTGGGAAAAAGACAGCTTGAGGGTAAATTTGCCTCATCGTTAGAGATACCTTATTAATATTAAGTCTGCAAAACAAGTCCTCTCTTTAATTCAACACTTCCAAAATGAACAAAGAGTTACAATGCCCTGCAGTAAAAGGCGACTTAATTGCATTTGGCCAATATTTATTTCGTGCACACTGTGTAAGACGCATTGAACTAGAGAGTATAAAAATTGGTAAATTACCATCTCTCAACTAAATAATCTTATGGTCTCATAACAGAAATAGGTTACAATGAATGTACAAATAACAATTTAAATAAAGATAATAATGAGATTTTTAAATGATTAAAGTTATTCTCCAAGAACACTTTAAACACAGTGCTTAAATTGTTTCTATTTATTGAGCTTCTACTACAATGAAGACTATATGGTAATTCTAGGATTAGAGACGCATGAGCAACACACACACACACACACACACACACACACACACACCCTGCCCCCAACTCACAAACAGTAGAAAGCATGTGACATTAAATAATTGCATCATTTAATTCTTGCAGCAACCGTGGTATTATAATCCCCCATTACACATGAGAGCACTCAGTGTAACCATAGGGAGTTGATCTGCTGCCAGCCACACTGAAGAGGCAGGGCATACTTCAGGTATCAGGGGTTGAGATTTGGCTATGAGAGCTAGAATGTCTGGTTCCAACTCCAGTTCCACAACATGAAAGCTGCGTGACACTGAGCAAGTCACTCAATAACTCTGTCTGAGTTTCCCCGCGCTGTAAAGGTTTGTTTTGAGAAGTGAATTAATCCTCATCTTGATCTACCTAGGGAGATCTAGTATACAAGAAATTCCTCTGTCATCTTTACTTTTTTTTAATCAAAAAGTTAAACAACTTCA</dnaseq>|
 
}}
 
}}
[[Category:Intergenic]][[Category:lnc-ADAMTS16-5]][[Category:NONHSAG039716]]
+
[[Category:Intergenic]][[Category:lnc-ADAMTS16-5]][[Category:NONHSAG039716]][[Category:ENSG00000231291.3]]

Revision as of 18:42, 15 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000503188.1

Source

Gencode19

Same with

lnc-ADAMTS16-5:1,NONHSAT100136

Classification

intergenic

Length

1676 nt

Genomic location

chr5+:4512375..4516889

Exon number

2

Exons

4512375..4512596,4515436..4516889

Genome context

Sequence
000001 ACCTTGTCTC CAGCTGAGGC TGAGCGAGCA CGCCTTTGTT TAGGGCCCCT TGTCTCGGCC TGTGTCAGAG CTTGCAGGGG 000080
000081 CGTTGGGCCT CTCTCTGCAG GGAGGACTGG TTTTAGAGGA CTCCCGCTTC CCCCAGTTGT ATCAGTTCAG GTGTAAACCC 000160
000161 GATATGCAAT AGGATCCGGC GTGGTGTCCA CACTCATTAG ACACATGGCA TCGTTTCCAA AGATACAGGC CCCCGCACTT 000240
000241 CAGCTTGATG CCAGAGGGCT TACACGTAAA CTCTGCTTGA CTTGGAAATC AAAGAGAGGT GAGAAGAGTT CAGATTTTCT 000320
000321 CCTGCTGAGG TAGGAGGCTC GCCAAGAGAC AAGACTGGAC TCATAAGGTC TGCAACTGGC TTTATCTAGT TAATAGCAGC 000400
000401 CTTTGACATC ACAAAACATG CTATTTCCTT GTGTTCATGT CTTTAAGAGG AGCCACGGTG AAAGCAAACA TTAAAGATTT 000480
000481 TAATCTAACA AAAATGTGGA GTGAAAGTAA GACATTTTAC ACCTGCTCTC TGCACTACTA TTTCAGGAGG AGGTCGGTCG 000560
000561 CTGATGTTGA AACTGTTATT CATAAATGTT TTCCATCTGT GTTTGTTTCT GATTTCTCAT CTGCATCCGC AGTTATGCAA 000640
000641 TGTCCTCCAA TGTTTGTCTC TTCTTCCTGA AATACGGTCT ATTTCACATT GCACTGCCCA TTTTCACAAG GCATCACTGG 000720
000721 ACTAGGGAGT CCTCAGAGAA AGCCAGGTAT GGTTCAGCTG TTTCCTTTCC AGTGTATATG ACACTTGGGA AAAAGACAGC 000800
000801 TTGAGGGTAA ATTTGCCTCA TCGTTAGAGA TACCTTATTA ATATTAAGTC TGCAAAACAA GTCCTCTCTT TAATTCAACA 000880
000881 CTTCCAAAAT GAACAAAGAG TTACAATGCC CTGCAGTAAA AGGCGACTTA ATTGCATTTG GCCAATATTT ATTTCGTGCA 000960
000961 CACTGTGTAA GACGCATTGA ACTAGAGAGT ATAAAAATTG GTAAATTACC ATCTCTCAAC TAAATAATCT TATGGTCTCA 001040
001041 TAACAGAAAT AGGTTACAAT GAATGTACAA ATAACAATTT AAATAAAGAT AATAATGAGA TTTTTAAATG ATTAAAGTTA 001120
001121 TTCTCCAAGA ACACTTTAAA CACAGTGCTT AAATTGTTTC TATTTATTGA GCTTCTACTA CAATGAAGAC TATATGGTAA 001200
001201 TTCTAGGATT AGAGACGCAT GAGCAACACA CACACACACA CACACACACA CACACACACA CCCTGCCCCC AACTCACAAA 001280
001281 CAGTAGAAAG CATGTGACAT TAAATAATTG CATCATTTAA TTCTTGCAGC AACCGTGGTA TTATAATCCC CCATTACACA 001360
001361 TGAGAGCACT CAGTGTAACC ATAGGGAGTT GATCTGCTGC CAGCCACACT GAAGAGGCAG GGCATACTTC AGGTATCAGG 001440
001441 GGTTGAGATT TGGCTATGAG AGCTAGAATG TCTGGTTCCA ACTCCAGTTC CACAACATGA AAGCTGCGTG ACACTGAGCA 001520
001521 AGTCACTCAA TAACTCTGTC TGAGTTTCCC CGCGCTGTAA AGGTTTGTTT TGAGAAGTGA ATTAATCCTC ATCTTGATCT 001600
001601 ACCTAGGGAG ATCTAGTATA CAAGAAATTC CTCTGTCATC TTTACTTTTT TTTAATCAAA AAGTTAAACA ACTTCA
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