Difference between revisions of "ENST00000505083.1"
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sequence = <dnaseq>CAAACTCCGGTGACCATAAGAATCACCTGGAGAGCTTGTTAAAGCACAGATTTGTGGTCCCCTCACCTGAGATTCTGATTCAGTGGGTCTGGAGGGGGGACTTTGCATTTCTAATAAGCTCCCAAGTGATGCTGCATAGGGCTGCCACAAATAGTAGGGGCTCAGTCAAGTTAGTATAATAGGATTTTTTTTCCTCTTATGTTGAAGTCCATAGGCAGGTAGTCCAGCCTAGTACCAAGGTTTCAGAACCTAGGCTTTTCCCCCTCTCCTTCCTGCCTTAAATGGCATTTGGTTTCCTACTCATGTTTCAGAATGTTTGCTTGAGCTACAGCCATCATGTCCACATTCAAACCAGTAAGAAAGAGGAAGGGGGAAAGGATGTCTTCTCTCTTTTTAAGGACATATCTCAGAAGTTGTATGTGACACTCTACTTACATCTTCTTAGCCAAAACTTCCTCACAAATCACACTAGCTGCAAAGAAATCTGGAAAATATAGTTTTTATTTGGGGTGTCATATGCCCAGCTAAAAATCAAGGTTTTATGATCAAGGCAGAAGAGAATGCACTTCTGACATTACTGATTTTTAATGTTACAGCAAACCTTTCCCAACTCTCCAGCCAGAGGTTTGCAATCTAAAACCTGCAATGGGCTAGGAAATTACAATAAAATTCTGAATTTCAAATTCTGATCACCCCTCTACAGGTAAGTATTATTTCTTTCATTTCTGTGTTCAAGAAATTGAGTCTCAGAGAGCTTCAGTGACTTTCCTGAGATCTCTCGGTAACTAAATGCCCCAACCAAGATTTAAACTCAACCCTGCCAAAGCCCAGGCTTCTAATGCGTCATTCTACATCACAGGAATCCCACATGTGTTTGCAGGATGAGCCTTGAATCAACCAACTACTGTTGCATACTATGCAACCACAAAACTCTGAGACCTAGACACTTATTTTACTACCATGTCTACAAGTCAACTGGAGACCAGCTGCTCTAGGCTGGGCTGGACTGGACTCCCCCAAGCCACAGCTGGGTCTGAGTCTGCTCCATGGTTCTCCATCTTCCTCAGACTTGTGGGCCTACCAGGGTAGAGCCTTCTCATGCCAAAAGCAGAGAAGCACATCTCACTGCTGCTTGTCGTGGGTCTGCTTCCATTCCCTTGACTGAAGGAAGTCACATGGCCAAGACAAAAGCTAGGCAGTACAGTCCTCCAGGAGGGAGTAAATATTTCTGAATATGTTCTTATTTACCCCAAGTCCCTATGCAGATGCATTGGAATGGGAAGAGCCCCAGACTGAGAATCAGAAGTCCCTAGTTCTAGTCCCAGACCTGCCATGAATGACTTGTGTGGCCTTGGACAAATACTAGCCCCTTCTGGGCCTCATGTTTGTTCTAGAGATCTCTAAGGCATACGCAGGCTTTAACTTAAGAAGCTATGGCATGAAAAAACAAATAGTTGCCTCTCAAAATTCTAATCTCCTCTGAATGTAGCTTAGTCTTTATGCAAAAATAAACACACACACTAGAGTGTCTTCAAAACCACTGGGCTAATAATGTTCATGATTCTGTTAATGACCAAACTGGAGCACAGTGCAGCTGGTCCTGCTGGTCACAGGAAGGCCCCAGAAAGAAATGAAGCCATCAAGAAGCCATTGATGCTGTGACCTTCTGTTGCAGGCTGCTCCTCTACTTAGACAGGGAGAAGATGGCCATCTATGAACCAGGAAGCCCTCACTAGACCCCAAGTCTGCCAGCACCTCGAACTTGGATTCCTCAGTCTTCACAACAGTGTGAGCTGGCTCACCGCCATGCTGTCTCTGAGAAGACTCCATCTCTCGGAGAACAATCTGCCTTGTTCATGGCATGATGCATGAAGAAAAGCAGCCGGGCAGGAGAGGGACAGGAAAATCTCCCATCTTCCTGCATAGCTGAGGCTTTCCCTACTCCTAGGGAGAAGGCACTGAAGTGAATCCCATGAACATTCTCAACTGTTTCCAAAATGTTGCCAATATTCTTCTGTATATTGATATTTTGAAATCCCCAATGTAGTGGTATGTTGTATTTGAGCCCAGATTTAAAATTGTATATGTTTCATTCT</dnaseq>| | sequence = <dnaseq>CAAACTCCGGTGACCATAAGAATCACCTGGAGAGCTTGTTAAAGCACAGATTTGTGGTCCCCTCACCTGAGATTCTGATTCAGTGGGTCTGGAGGGGGGACTTTGCATTTCTAATAAGCTCCCAAGTGATGCTGCATAGGGCTGCCACAAATAGTAGGGGCTCAGTCAAGTTAGTATAATAGGATTTTTTTTCCTCTTATGTTGAAGTCCATAGGCAGGTAGTCCAGCCTAGTACCAAGGTTTCAGAACCTAGGCTTTTCCCCCTCTCCTTCCTGCCTTAAATGGCATTTGGTTTCCTACTCATGTTTCAGAATGTTTGCTTGAGCTACAGCCATCATGTCCACATTCAAACCAGTAAGAAAGAGGAAGGGGGAAAGGATGTCTTCTCTCTTTTTAAGGACATATCTCAGAAGTTGTATGTGACACTCTACTTACATCTTCTTAGCCAAAACTTCCTCACAAATCACACTAGCTGCAAAGAAATCTGGAAAATATAGTTTTTATTTGGGGTGTCATATGCCCAGCTAAAAATCAAGGTTTTATGATCAAGGCAGAAGAGAATGCACTTCTGACATTACTGATTTTTAATGTTACAGCAAACCTTTCCCAACTCTCCAGCCAGAGGTTTGCAATCTAAAACCTGCAATGGGCTAGGAAATTACAATAAAATTCTGAATTTCAAATTCTGATCACCCCTCTACAGGTAAGTATTATTTCTTTCATTTCTGTGTTCAAGAAATTGAGTCTCAGAGAGCTTCAGTGACTTTCCTGAGATCTCTCGGTAACTAAATGCCCCAACCAAGATTTAAACTCAACCCTGCCAAAGCCCAGGCTTCTAATGCGTCATTCTACATCACAGGAATCCCACATGTGTTTGCAGGATGAGCCTTGAATCAACCAACTACTGTTGCATACTATGCAACCACAAAACTCTGAGACCTAGACACTTATTTTACTACCATGTCTACAAGTCAACTGGAGACCAGCTGCTCTAGGCTGGGCTGGACTGGACTCCCCCAAGCCACAGCTGGGTCTGAGTCTGCTCCATGGTTCTCCATCTTCCTCAGACTTGTGGGCCTACCAGGGTAGAGCCTTCTCATGCCAAAAGCAGAGAAGCACATCTCACTGCTGCTTGTCGTGGGTCTGCTTCCATTCCCTTGACTGAAGGAAGTCACATGGCCAAGACAAAAGCTAGGCAGTACAGTCCTCCAGGAGGGAGTAAATATTTCTGAATATGTTCTTATTTACCCCAAGTCCCTATGCAGATGCATTGGAATGGGAAGAGCCCCAGACTGAGAATCAGAAGTCCCTAGTTCTAGTCCCAGACCTGCCATGAATGACTTGTGTGGCCTTGGACAAATACTAGCCCCTTCTGGGCCTCATGTTTGTTCTAGAGATCTCTAAGGCATACGCAGGCTTTAACTTAAGAAGCTATGGCATGAAAAAACAAATAGTTGCCTCTCAAAATTCTAATCTCCTCTGAATGTAGCTTAGTCTTTATGCAAAAATAAACACACACACTAGAGTGTCTTCAAAACCACTGGGCTAATAATGTTCATGATTCTGTTAATGACCAAACTGGAGCACAGTGCAGCTGGTCCTGCTGGTCACAGGAAGGCCCCAGAAAGAAATGAAGCCATCAAGAAGCCATTGATGCTGTGACCTTCTGTTGCAGGCTGCTCCTCTACTTAGACAGGGAGAAGATGGCCATCTATGAACCAGGAAGCCCTCACTAGACCCCAAGTCTGCCAGCACCTCGAACTTGGATTCCTCAGTCTTCACAACAGTGTGAGCTGGCTCACCGCCATGCTGTCTCTGAGAAGACTCCATCTCTCGGAGAACAATCTGCCTTGTTCATGGCATGATGCATGAAGAAAAGCAGCCGGGCAGGAGAGGGACAGGAAAATCTCCCATCTTCCTGCATAGCTGAGGCTTTCCCTACTCCTAGGGAGAAGGCACTGAAGTGAATCCCATGAACATTCTCAACTGTTTCCAAAATGTTGCCAATATTCTTCTGTATATTGATATTTTGAAATCCCCAATGTAGTGGTATGTTGTATTTGAGCCCAGATTTAAAATTGTATATGTTTCATTCT</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:ENSG00000251218.1]][[Category:lnc-KHDRBS3-3]] | + | [[Category:Intergenic]][[Category:ENSG00000251218.1]][[Category:lnc-KHDRBS3-3]][[Category:Transcripts]] |
Revision as of 11:48, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000505083.1 |
Source |
Gencode19 |
Same with |
lnc-KHDRBS3-3:1 |
Classification |
intergenic |
Length |
2096 nt |
Genomic location |
chr8+:135862178..135894142 |
Exon number |
3 |
Exons |
135862178..135863873,135893427..135893523,135893840..135894142 |
Genome context |
|
Sequence |
000001 CAAACTCCGG TGACCATAAG AATCACCTGG AGAGCTTGTT AAAGCACAGA TTTGTGGTCC CCTCACCTGA GATTCTGATT 000080
000081 CAGTGGGTCT GGAGGGGGGA CTTTGCATTT CTAATAAGCT CCCAAGTGAT GCTGCATAGG GCTGCCACAA ATAGTAGGGG 000160 000161 CTCAGTCAAG TTAGTATAAT AGGATTTTTT TTCCTCTTAT GTTGAAGTCC ATAGGCAGGT AGTCCAGCCT AGTACCAAGG 000240 000241 TTTCAGAACC TAGGCTTTTC CCCCTCTCCT TCCTGCCTTA AATGGCATTT GGTTTCCTAC TCATGTTTCA GAATGTTTGC 000320 000321 TTGAGCTACA GCCATCATGT CCACATTCAA ACCAGTAAGA AAGAGGAAGG GGGAAAGGAT GTCTTCTCTC TTTTTAAGGA 000400 000401 CATATCTCAG AAGTTGTATG TGACACTCTA CTTACATCTT CTTAGCCAAA ACTTCCTCAC AAATCACACT AGCTGCAAAG 000480 000481 AAATCTGGAA AATATAGTTT TTATTTGGGG TGTCATATGC CCAGCTAAAA ATCAAGGTTT TATGATCAAG GCAGAAGAGA 000560 000561 ATGCACTTCT GACATTACTG ATTTTTAATG TTACAGCAAA CCTTTCCCAA CTCTCCAGCC AGAGGTTTGC AATCTAAAAC 000640 000641 CTGCAATGGG CTAGGAAATT ACAATAAAAT TCTGAATTTC AAATTCTGAT CACCCCTCTA CAGGTAAGTA TTATTTCTTT 000720 000721 CATTTCTGTG TTCAAGAAAT TGAGTCTCAG AGAGCTTCAG TGACTTTCCT GAGATCTCTC GGTAACTAAA TGCCCCAACC 000800 000801 AAGATTTAAA CTCAACCCTG CCAAAGCCCA GGCTTCTAAT GCGTCATTCT ACATCACAGG AATCCCACAT GTGTTTGCAG 000880 000881 GATGAGCCTT GAATCAACCA ACTACTGTTG CATACTATGC AACCACAAAA CTCTGAGACC TAGACACTTA TTTTACTACC 000960 000961 ATGTCTACAA GTCAACTGGA GACCAGCTGC TCTAGGCTGG GCTGGACTGG ACTCCCCCAA GCCACAGCTG GGTCTGAGTC 001040 001041 TGCTCCATGG TTCTCCATCT TCCTCAGACT TGTGGGCCTA CCAGGGTAGA GCCTTCTCAT GCCAAAAGCA GAGAAGCACA 001120 001121 TCTCACTGCT GCTTGTCGTG GGTCTGCTTC CATTCCCTTG ACTGAAGGAA GTCACATGGC CAAGACAAAA GCTAGGCAGT 001200 001201 ACAGTCCTCC AGGAGGGAGT AAATATTTCT GAATATGTTC TTATTTACCC CAAGTCCCTA TGCAGATGCA TTGGAATGGG 001280 001281 AAGAGCCCCA GACTGAGAAT CAGAAGTCCC TAGTTCTAGT CCCAGACCTG CCATGAATGA CTTGTGTGGC CTTGGACAAA 001360 001361 TACTAGCCCC TTCTGGGCCT CATGTTTGTT CTAGAGATCT CTAAGGCATA CGCAGGCTTT AACTTAAGAA GCTATGGCAT 001440 001441 GAAAAAACAA ATAGTTGCCT CTCAAAATTC TAATCTCCTC TGAATGTAGC TTAGTCTTTA TGCAAAAATA AACACACACA 001520 001521 CTAGAGTGTC TTCAAAACCA CTGGGCTAAT AATGTTCATG ATTCTGTTAA TGACCAAACT GGAGCACAGT GCAGCTGGTC 001600 001601 CTGCTGGTCA CAGGAAGGCC CCAGAAAGAA ATGAAGCCAT CAAGAAGCCA TTGATGCTGT GACCTTCTGT TGCAGGCTGC 001680 001681 TCCTCTACTT AGACAGGGAG AAGATGGCCA TCTATGAACC AGGAAGCCCT CACTAGACCC CAAGTCTGCC AGCACCTCGA 001760 001761 ACTTGGATTC CTCAGTCTTC ACAACAGTGT GAGCTGGCTC ACCGCCATGC TGTCTCTGAG AAGACTCCAT CTCTCGGAGA 001840 001841 ACAATCTGCC TTGTTCATGG CATGATGCAT GAAGAAAAGC AGCCGGGCAG GAGAGGGACA GGAAAATCTC CCATCTTCCT 001920 001921 GCATAGCTGA GGCTTTCCCT ACTCCTAGGG AGAAGGCACT GAAGTGAATC CCATGAACAT TCTCAACTGT TTCCAAAATG 002000 002001 TTGCCAATAT TCTTCTGTAT ATTGATATTT TGAAATCCCC AATGTAGTGG TATGTTGTAT TTGAGCCCAG ATTTAAAATT 002080 002081 GTATATGTTT CATTCT |