ENST00000506656.1
Revision as of 09:07, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...")
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
ENST00000506656.1 |
Source |
Gencode19 |
Same with |
lnc-MRPS30-3:1,NONHSAT101356 |
Classification |
intergenic |
Length |
820 nt |
Genomic location |
chr5+:45035301..45098749 |
Exon number |
2 |
Exons |
45035301..45035378,45098008..45098749 |
Genome context |
|
Sequence |
000001 AGTGAAATCT TGAAGCAAGG TGCTTGTCTG AGTATCTGAG GACAGAGTGG AATTTTCCAG ACCTTCTTGA ACTGGACCAG 000080
000081 TGGATGCCTG TGTGGTTTCG AATCAAATCT GCTCATGCTT ATGAATCTTG CTGGTATAGA AGCCCTGCCA TTCACTACTG 000160 000161 TAGGGATGAT CCCCATGTGG AGAAACTGAC AAAAGCCTTT TTTCTGGAGT GGAGCTGGAA GTTACTCCTA ACTATCTCAG 000240 000241 TGTTAAAGCA GCAGGGGATG AGGAGAAATT CTTGAAAATG CTGTCACATC AAAACCAACT TCTTATAGAA TGCCACAGTG 000320 000321 AAGAGTGGAC TTCTCAGGAC AACCCACTTA CTATAGATGC TCAGATTCTG AAACAATTTT GAAATACTTC AATACTCTAA 000400 000401 ATTACAGGCG GGAATCATTA TTTTGTTCAA TACCTGCTGA CAAGAAGTAA AAGCACTTTT TTTTTTTTTT TTTGAGACAC 000480 000481 AGTCTCACTC TCCAACTCAG GCAGGAGTGC AGTGGCATTA TCTCAGCTCA ATGCAACATC TGCCTCCTGG GTTCAAGCCA 000560 000561 TTCTCCTGCC TCAGCCTACT GATTAGCTGG GATTACAAGC ATGTGCCACC ATGCCCGGCT AATTTTTGTA TTTTTAGTGG 000640 000641 AGACTGGGTT TCACCATGTT GGCCAGGCTG GTCTCAAACT CCTGACCTCG GGTGATCCAC CCACTTCCCA AAGTGCTGGG 000720 000721 ATTACAGGCG TGAGACACCA TGCCTGGCAA AAGCACATTT TAAAAAGTGT ATTAAATACT TAGTCAAGAA AAGGAAACCA 000800 000801 AAATTGAAGA AGTGCTCCCT |
Predicted Small Protein
Name | ENST00000506656.1_smProtein_83:274 |
Length | 64 |
Molecular weight | 7656.8509 |
Aromaticity | 0.15873015873 |
Instability index | 61.4619047619 |
Isoelectric point | 9.62335205078 |
Runs | 9 |
Runs residual | 0.00210560414642 |
Runs probability | 0.0415513552768 |
Amino acid sequence | MPVWFRIKSAHAYESCWYRSPAIHYCRDDPHVEKLTKAFFLEWSWKLLLTISVLKQQGMR RNS |
Secondary structure | LLEEEEELLLHHHHLLLLLLLLLEEELLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHLLL LLL |
PRMN | - |
PiMo | - |