Difference between revisions of "ENST00000508179.1"
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sequence = <dnaseq>CTCCTCCTCCTCCTCCTCCCCGCCGGGGTGAAACTCGAGCGCCCCACCCGCGCCTGACCTCCCCGAGCCCCTCCCCGGGCCCCGCCCCTTCCCGGTACAGGACCCCCACCTTCGCTCCTGGGAGCCCCGCTGCACCCCAGGAGTTCCATTCCAGCCTCCCCAGTGCGAGTGCGGCCGAGCGCTGACTTTTGGGGGCTCCCTCCCCCGTCTCACTGGGTCCCTCTGCGGCTCCCCCGCCCGCTGTCCCGGTTCAGACGTGGCTGCACCCCGGAGGGGGGCGCCGGCCGAGACCTGAGACGTGGCGCTCCCTCTCTGCCGGCCTCGGCTTCAGTGCTTGAATTTCAGCCACATCCCTAAGCTGCCATCTCAGACCAGAGGAACAGGGAGGGGGGCTTTCTGGAAAGAACATCACCTGGAAGAAATCAGGACATGACTGTGGGCCATGAGTGACCTTCAAAGGAAAGCCGGGTATCTGTGGTCTTTAAGATGTGATCCATGACATTTAAAAACTGAAGAAATGGAAAGATCATCTGATCAGGCCCATCAGTCTTTTTCCTAATGCTAAACATTGGTACAAAGACGTGAAGTTTGATGTCTCACTAAGATTGCCTAGGGCTGCTTTATTGCTCACCTACTTCAAAGTATTGGGAAAACATGATTATGGGTACAGGTGATGCTGTGTTGCCCCCAGACAGGTTTCTTTTGTCAGGTTCTTTTGATGGATTAGGAACCTACAAGTGGGGAGATTTTAGGGAAATAGCCCCTCCACTTGGATTTCACCAAAACGTCTTTAGGGTTCTCTTACCCCAAGAAACACGCATTCCTCTTTAGTGTGGCAGCCCACTCTATTGGCAAAGTTAAGCAGACCAGTTTTACTAAAAAGGAGCCACCCAGAAACTTAGACAGAAAATACTTGAGGCACAGATGAGAATGAGCACAAATGTGCATAGCAAGTGCAGTTTCCTGGCCCTTAAACTGAAGGGCCAGGTCAGTCTGCTCCTCCAGGCACAGCCTGGGACCCCATCATGTGCCCCACTCTGCAGTCTGAGCTTCCACTCAAGTCCACCAGGGCCTGCCTCACATATATATACAAGACCCAATGTCAGAGTCTGCCTCTGCCCATGTCTGGTCAGAGGGTTGCACTTTGCCACTGCTACATGTTCCCAGAGGTTGGCACAGCATGACCTGGACCTCACCTAACCCAGGCAAACTCTGCTCATCTTCGAGCTCTCTGGAACCCATTTCTCAAGGGAGAACCACATTCCCCCACCTCACAGCCAAGTTCAAGGAAGCAGCCTGGCTAAAGCAATGACTCAAGGATACCAGAAGCAGAGCACGCATTTAAGAAGATGCGCTGACTCGCAGGAGCAGCTGACTCTTCTTAAGAAGAGTTTACTGATTCTTCTTTCAGTACGGGCCTTTTAATAAGATATTGTATTTTACTTCAGCTATGGGTGCAGACAATTAAAGGATTCTAGAAATCTGAAAGTGTTTTGCCTTGTCCTCTTGGTTAAATTTCTGGATATATTGTCTAGCAACTCAATTTGCTTAAACAAAATTGTTGTGTCAAAAAAGCCCAAGTCATCTTTTATAAGTGTGGTCTGGGGAGAAGAAAAAAATGCTAAGTTTAAAAGATTTTTGGAATATCTGAAGAAAATACAGATAGCTTGTAATGGAGATGAAGCCTCTGGATGGTTTCCAGGGTGTTATTTTCCGACATTGAGTCTTGTATATATCTTGAATGTCTATAAGCAAAGAATGGCTATACTGTTTTTAAAAAGATATGTTTTATACTTATT</dnaseq>| | sequence = <dnaseq>CTCCTCCTCCTCCTCCTCCCCGCCGGGGTGAAACTCGAGCGCCCCACCCGCGCCTGACCTCCCCGAGCCCCTCCCCGGGCCCCGCCCCTTCCCGGTACAGGACCCCCACCTTCGCTCCTGGGAGCCCCGCTGCACCCCAGGAGTTCCATTCCAGCCTCCCCAGTGCGAGTGCGGCCGAGCGCTGACTTTTGGGGGCTCCCTCCCCCGTCTCACTGGGTCCCTCTGCGGCTCCCCCGCCCGCTGTCCCGGTTCAGACGTGGCTGCACCCCGGAGGGGGGCGCCGGCCGAGACCTGAGACGTGGCGCTCCCTCTCTGCCGGCCTCGGCTTCAGTGCTTGAATTTCAGCCACATCCCTAAGCTGCCATCTCAGACCAGAGGAACAGGGAGGGGGGCTTTCTGGAAAGAACATCACCTGGAAGAAATCAGGACATGACTGTGGGCCATGAGTGACCTTCAAAGGAAAGCCGGGTATCTGTGGTCTTTAAGATGTGATCCATGACATTTAAAAACTGAAGAAATGGAAAGATCATCTGATCAGGCCCATCAGTCTTTTTCCTAATGCTAAACATTGGTACAAAGACGTGAAGTTTGATGTCTCACTAAGATTGCCTAGGGCTGCTTTATTGCTCACCTACTTCAAAGTATTGGGAAAACATGATTATGGGTACAGGTGATGCTGTGTTGCCCCCAGACAGGTTTCTTTTGTCAGGTTCTTTTGATGGATTAGGAACCTACAAGTGGGGAGATTTTAGGGAAATAGCCCCTCCACTTGGATTTCACCAAAACGTCTTTAGGGTTCTCTTACCCCAAGAAACACGCATTCCTCTTTAGTGTGGCAGCCCACTCTATTGGCAAAGTTAAGCAGACCAGTTTTACTAAAAAGGAGCCACCCAGAAACTTAGACAGAAAATACTTGAGGCACAGATGAGAATGAGCACAAATGTGCATAGCAAGTGCAGTTTCCTGGCCCTTAAACTGAAGGGCCAGGTCAGTCTGCTCCTCCAGGCACAGCCTGGGACCCCATCATGTGCCCCACTCTGCAGTCTGAGCTTCCACTCAAGTCCACCAGGGCCTGCCTCACATATATATACAAGACCCAATGTCAGAGTCTGCCTCTGCCCATGTCTGGTCAGAGGGTTGCACTTTGCCACTGCTACATGTTCCCAGAGGTTGGCACAGCATGACCTGGACCTCACCTAACCCAGGCAAACTCTGCTCATCTTCGAGCTCTCTGGAACCCATTTCTCAAGGGAGAACCACATTCCCCCACCTCACAGCCAAGTTCAAGGAAGCAGCCTGGCTAAAGCAATGACTCAAGGATACCAGAAGCAGAGCACGCATTTAAGAAGATGCGCTGACTCGCAGGAGCAGCTGACTCTTCTTAAGAAGAGTTTACTGATTCTTCTTTCAGTACGGGCCTTTTAATAAGATATTGTATTTTACTTCAGCTATGGGTGCAGACAATTAAAGGATTCTAGAAATCTGAAAGTGTTTTGCCTTGTCCTCTTGGTTAAATTTCTGGATATATTGTCTAGCAACTCAATTTGCTTAAACAAAATTGTTGTGTCAAAAAAGCCCAAGTCATCTTTTATAAGTGTGGTCTGGGGAGAAGAAAAAAATGCTAAGTTTAAAAGATTTTTGGAATATCTGAAGAAAATACAGATAGCTTGTAATGGAGATGAAGCCTCTGGATGGTTTCCAGGGTGTTATTTTCCGACATTGAGTCTTGTATATATCTTGAATGTCTATAAGCAAAGAATGGCTATACTGTTTTTAAAAAGATATGTTTTATACTTATT</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]][[Category:lnc-CCT5-4]][[Category:NONHSAG039839]] | + | [[Category:Intergenic]][[Category:lnc-CCT5-4]][[Category:NONHSAG039839]][[Category:ENSG00000250786.1]] |
Revision as of 18:44, 15 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000508179.1 |
Source |
Gencode19 |
Same with |
lnc-CCT5-4:1,NONHSAT100367 |
Classification |
intergenic |
Length |
1799 nt |
Genomic location |
chr5+:9546312..9550721 |
Exon number |
3 |
Exons |
9546312..9546642,9549102..9549261,9549414..9550721 |
Genome context |
|
Sequence |
000001 CTCCTCCTCC TCCTCCTCCC CGCCGGGGTG AAACTCGAGC GCCCCACCCG CGCCTGACCT CCCCGAGCCC CTCCCCGGGC 000080
000081 CCCGCCCCTT CCCGGTACAG GACCCCCACC TTCGCTCCTG GGAGCCCCGC TGCACCCCAG GAGTTCCATT CCAGCCTCCC 000160 000161 CAGTGCGAGT GCGGCCGAGC GCTGACTTTT GGGGGCTCCC TCCCCCGTCT CACTGGGTCC CTCTGCGGCT CCCCCGCCCG 000240 000241 CTGTCCCGGT TCAGACGTGG CTGCACCCCG GAGGGGGGCG CCGGCCGAGA CCTGAGACGT GGCGCTCCCT CTCTGCCGGC 000320 000321 CTCGGCTTCA GTGCTTGAAT TTCAGCCACA TCCCTAAGCT GCCATCTCAG ACCAGAGGAA CAGGGAGGGG GGCTTTCTGG 000400 000401 AAAGAACATC ACCTGGAAGA AATCAGGACA TGACTGTGGG CCATGAGTGA CCTTCAAAGG AAAGCCGGGT ATCTGTGGTC 000480 000481 TTTAAGATGT GATCCATGAC ATTTAAAAAC TGAAGAAATG GAAAGATCAT CTGATCAGGC CCATCAGTCT TTTTCCTAAT 000560 000561 GCTAAACATT GGTACAAAGA CGTGAAGTTT GATGTCTCAC TAAGATTGCC TAGGGCTGCT TTATTGCTCA CCTACTTCAA 000640 000641 AGTATTGGGA AAACATGATT ATGGGTACAG GTGATGCTGT GTTGCCCCCA GACAGGTTTC TTTTGTCAGG TTCTTTTGAT 000720 000721 GGATTAGGAA CCTACAAGTG GGGAGATTTT AGGGAAATAG CCCCTCCACT TGGATTTCAC CAAAACGTCT TTAGGGTTCT 000800 000801 CTTACCCCAA GAAACACGCA TTCCTCTTTA GTGTGGCAGC CCACTCTATT GGCAAAGTTA AGCAGACCAG TTTTACTAAA 000880 000881 AAGGAGCCAC CCAGAAACTT AGACAGAAAA TACTTGAGGC ACAGATGAGA ATGAGCACAA ATGTGCATAG CAAGTGCAGT 000960 000961 TTCCTGGCCC TTAAACTGAA GGGCCAGGTC AGTCTGCTCC TCCAGGCACA GCCTGGGACC CCATCATGTG CCCCACTCTG 001040 001041 CAGTCTGAGC TTCCACTCAA GTCCACCAGG GCCTGCCTCA CATATATATA CAAGACCCAA TGTCAGAGTC TGCCTCTGCC 001120 001121 CATGTCTGGT CAGAGGGTTG CACTTTGCCA CTGCTACATG TTCCCAGAGG TTGGCACAGC ATGACCTGGA CCTCACCTAA 001200 001201 CCCAGGCAAA CTCTGCTCAT CTTCGAGCTC TCTGGAACCC ATTTCTCAAG GGAGAACCAC ATTCCCCCAC CTCACAGCCA 001280 001281 AGTTCAAGGA AGCAGCCTGG CTAAAGCAAT GACTCAAGGA TACCAGAAGC AGAGCACGCA TTTAAGAAGA TGCGCTGACT 001360 001361 CGCAGGAGCA GCTGACTCTT CTTAAGAAGA GTTTACTGAT TCTTCTTTCA GTACGGGCCT TTTAATAAGA TATTGTATTT 001440 001441 TACTTCAGCT ATGGGTGCAG ACAATTAAAG GATTCTAGAA ATCTGAAAGT GTTTTGCCTT GTCCTCTTGG TTAAATTTCT 001520 001521 GGATATATTG TCTAGCAACT CAATTTGCTT AAACAAAATT GTTGTGTCAA AAAAGCCCAA GTCATCTTTT ATAAGTGTGG 001600 001601 TCTGGGGAGA AGAAAAAAAT GCTAAGTTTA AAAGATTTTT GGAATATCTG AAGAAAATAC AGATAGCTTG TAATGGAGAT 001680 001681 GAAGCCTCTG GATGGTTTCC AGGGTGTTAT TTTCCGACAT TGAGTCTTGT ATATATCTTG AATGTCTATA AGCAAAGAAT 001760 001761 GGCTATACTG TTTTTAAAAA GATATGTTTT ATACTTATT |