ENST00000509782.1
Revision as of 18:42, 15 October 2014 by 211.100.51.162 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000509782.1 |
Source |
Gencode19 |
Same with |
lnc-POLR2B-6:2,NONHSAT096587 |
Classification |
intergenic |
Length |
590 nt |
Genomic location |
chr4+:59879291..59912677 |
Exon number |
2 |
Exons |
59879291..59879343,59912141..59912677 |
Genome context |
|
Sequence |
000001 TGGCCTCATA GAAAGATTTT GGAAGTATTT TCTCCTGCAT TTTTCAGAAA AGTATGTTGG TGCTGTTGCT TTAGGACCTT 000080
000081 CAGACCTGGA TGGGGACGTA TGATAAGGAT CCTGGTTCTC AGGCCTTCTG GTCTGCACTG TAGCTATACC TCCAGCTTTC 000160 000161 CTGTGCTGTC AGTTTGGAGA CAGCAGGTCA TGAGACTTCA CTGCATTCAT AATTATGTGA GCCAGTTTGT CATGGTAAAT 000240 000241 ATGTATGTAT GCATGTATGT ATCCATCCAT CCATCCTGTT GATTCTGTTT CTCTGGAGAA CGCTGATTAA AACACCTCTC 000320 000321 TGCCTTCAGA ACCCTTTTTC TTTCCTCTGA CGTATTAATA CTTTGAATTT TATAGAGAGA TATTACATGA GCAGATGTGG 000400 000401 CAACATTATT GAATATAAAA TGGTTAATTT TGCTGCATCA CCCAATTTTC TTACTCTGAT AAAAACTATA ATGTAAGAAA 000480 000481 TGAGATAATA ATTATAAGTG ATTATGACAA GTGTAATAAT AACATCACTT TTATGGGGAA ATAAGGAAAA GCAATAATTT 000560 000561 ATAATGAAAT AAAAACTAAT GATCAACATA |
Predicted Small Protein
Name | ENST00000509782.1_smProtein_248:349 |
Length | 34 |
Molecular weight | 3908.827 |
Aromaticity | 0.121212121212 |
Instability index | 72.7121212121 |
Isoelectric point | 8.94110107422 |
Runs | 5 |
Runs residual | 0.0326086956522 |
Runs probability | 0.0236177353824 |
Amino acid sequence | MHVCIHPSILLILFLWRTLIKTPLCLQNPFSFL |
Secondary structure | LEEEELHHHHHHHHHHHHHHLLLLLLLLLLLLL |
PRMN | LLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLL |
PiMo | i???????????????????????????????? |