Difference between revisions of "ENST00000534918.1"

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sequence = <dnaseq>CTCCCAGGGAAGCCCCCGGGGTCAGGTGGGTGCCGCTGTTCCCACTGAAGATGCGGCCCCCAGTTCACTGCCCACTCGGGGGGGATTTGAGGGTCATTGGTTCTGAGGGCCCTCCGCCTGCTCTTTTGCTTCTAAATCCAGCATCTTCTGTATGACCTTTGTCCCGCTCCTGCCACCCCACGAAGACAGACGTGAGGGTCAGGGGAGCCACGGTGCTAACTGCCACTCTGGGCGGGCACAGGCGAGGGCTGTGCAGCACCCGGGCACGTGGGGTCTTCGGAGGGGCTGCTCCCCACACCACTTCCCCTGCCCCTGCCGAGCCCTGCCGTGGGGTGGGGGGGCGCAGGGAGAGAAAGCAGCCGCCCTGGGTGAGAGCCAGGAGGGACACTGGGCAGGCAGATGCCACCCCAGGTGTGGGGACCCCCGCTACTGAGTGGCCGGGAGGAGCCCACAGGCTCCCCACATGCAGCTGAGCCCAGGGTTGTGGTCGTGGGTCGTGGGTCAAGGATGGTGGCTGGTGTGGTTGGGGGAGAGGCTCAAGGCCCGCCTGCCAACCTTGTCACCTATGTGGGGGTGAGGGGAGCCCGCCAGAGGCCAGAGCCCCCACTGTCCCTTCCCACCCTCCAGCCAGGCTCCAGGCCTCCTAGGGCCAGAGTATCTGAGCTTTCTCTCGCTTGCCGGGCCTGTGGTTTGGGGGTTTGTGTGGAGCCTGGTCCAGGAGCCCTCCTTCCTGATCTGCACTGGCTGGCCCTCCTGACAGCCCCAGGCCCCCGTGCCCTCTGCCAGGAGGTGCCTTGCCACTTGGCATGGCCCCAGTCACGGGTGGCACATCTGGGGTGAATGCACGTCAGTGGAGGCAGAATCATTCTGTCTGAATGAATGGAGTTTCCAGGCCCCCACTGGCCCTCTGTGTGAGGGTCTGCAGGGTTTGGCAGGACAGGTCTTTCTCTCCGGCGAGAGCACCCACCCTGACCGGCTGCTGGATGAGGGCACCAAAGCTCGCTAGGGAGGGCTCTGTCCTTAGGGAGGAGCTGCGGAATCCCTGCAGCTGTGCCCCCAGGCCCTGCCTTGCACACTTCCTGCAGCCAGGGCGCCCCTGGGGAGGTCAGGGCAGGCCGGGGAGGCTGAGGCCCACCTGCCATAGTGGGCAGGTGCGGGAGCCAGGGCGGCAGTGGCCTCGGGGCTGGGTGGGGCGCCTGGCCTCTGGTCTCTGGAGCAGTCAGGGGCTCTGCAGACGCTGAGAGGCCTGCTCATAGTGGACTGGGAGATGCTGGAGCAGCCTCAGAGCCATGGCCGGCCCACAGCGGGAGACGGCCCTGCTGCTGCCCCTCTGCCTGTGCGTGTGCACCTGTGGGCACCTGCGTGTGCTGGGGCAGGCAGGGCTGTATTGGGACCAGGTCCCGTAACAGCCTGCCTGCTTACCGTCTGCTCCCATCCCTGGGGAAAGCAAGGGAGCTCGGGGTCCTAGGACCTGACCTCAGCGCTCACCCCCACCAGCACCACAGTCACCAGGACTCTGTGACTCAGTTTACCCCACGAGAGCCCCTGGGATTCCCAGGGCATCAGAAGGCCCATCAGCCTCCCGTGAACTGCTGGGGTGGGCCTGGCCTTGGGACGCGGGTGCAGGGGCCTCTCCTCACTGCCCCATGGCACCCACAGCCAGTGCCAGAGCCTGCTGCAGCCCCGACCCGGCAGAGCAAGCGGCTCTGCTACCTCAGCCACGTAGCTGATGGCATCCTTCAGGTTCAGCTCGTGGAAGACATTCAGGATCCGGTCTCGAGACTTCTGGGCCGACCGTCTCATGAGGACCCTGCTGAGGAACTTCCTGTCGAAGTGGGACCACCTGTAGGGACAGACCTTGGGTGTGAGCCTCAGGTGACAGGCGCCCTAGAGCCCGCCGGACGCGTGGCCCGGCCCCTTCTCTCCTGAATTTTGTTTGCTATAGTGACCCTGTAGGCGCGTTTAAAATGAGGGAAGCAGCCCCTGCCACACGCCCAGGCCGTCCGCCGTTCTCCCGCCTGTCCTGTTGGATGGAGGCCGTTAGACGCATATGAAACTGCATGCCGCCTCCTCCAGAGGGTGGCTCAGGACACGGTGGGTGTCAGGCCTGGTCAGGCAAGGGGGCTTTGGCCACATGGGGGGCACCTTCAGGTGCACAGGAGGAAGGGCAGGGGCGGACAGACACCCTGAGCCCTTAGACTTGTGGGAGCCAAGCTGACCAGAGTGAGGTTTTTTTTAGCCTAACGGAATTAGAGTATTCGCTGGTTATCCAGATCAGAAGGGACGGTGGCCTGGCCGGACTTAGAGGAAACTCTGGGGCACAAGGAGGTGATGCCTGTCACTTGGACATGGGTGCAGCCGCCAGAGCCGCCCTCCAGGGCACAGGGTGGGCCCGGGTGAGCTTGTGTGCTCACACCTGGGCAGGCCCCGCGGCAGCAATGGCAGCTCTCCTGTACAGGCTGAGTTTCAGCCACACCAAGAAGTCAAAGCTAACCGAGGCTGTGCCTTCCGAGACCCCCGGGATGGCCCCTGGGAGGCCAAGGAGTCGGGGACTGGGTACCCGGAGCAGAGTCACTGTGGCCACGGAGAACCGCAGCTGAGCTTTATGAAGCCACGTGGCCACACCTCCCGGTGCCTCCACCCCAAGCAAACACAGATCGCTCAGAAAATGGGAACCCAGGGCAAATTGTATGTGCTCCTTACTGGGTTTATTATAAGTGTCACATGTTTTTTATAATAAAACATAGGTGATTTCACCTTAA</dnaseq>|
 
sequence = <dnaseq>CTCCCAGGGAAGCCCCCGGGGTCAGGTGGGTGCCGCTGTTCCCACTGAAGATGCGGCCCCCAGTTCACTGCCCACTCGGGGGGGATTTGAGGGTCATTGGTTCTGAGGGCCCTCCGCCTGCTCTTTTGCTTCTAAATCCAGCATCTTCTGTATGACCTTTGTCCCGCTCCTGCCACCCCACGAAGACAGACGTGAGGGTCAGGGGAGCCACGGTGCTAACTGCCACTCTGGGCGGGCACAGGCGAGGGCTGTGCAGCACCCGGGCACGTGGGGTCTTCGGAGGGGCTGCTCCCCACACCACTTCCCCTGCCCCTGCCGAGCCCTGCCGTGGGGTGGGGGGGCGCAGGGAGAGAAAGCAGCCGCCCTGGGTGAGAGCCAGGAGGGACACTGGGCAGGCAGATGCCACCCCAGGTGTGGGGACCCCCGCTACTGAGTGGCCGGGAGGAGCCCACAGGCTCCCCACATGCAGCTGAGCCCAGGGTTGTGGTCGTGGGTCGTGGGTCAAGGATGGTGGCTGGTGTGGTTGGGGGAGAGGCTCAAGGCCCGCCTGCCAACCTTGTCACCTATGTGGGGGTGAGGGGAGCCCGCCAGAGGCCAGAGCCCCCACTGTCCCTTCCCACCCTCCAGCCAGGCTCCAGGCCTCCTAGGGCCAGAGTATCTGAGCTTTCTCTCGCTTGCCGGGCCTGTGGTTTGGGGGTTTGTGTGGAGCCTGGTCCAGGAGCCCTCCTTCCTGATCTGCACTGGCTGGCCCTCCTGACAGCCCCAGGCCCCCGTGCCCTCTGCCAGGAGGTGCCTTGCCACTTGGCATGGCCCCAGTCACGGGTGGCACATCTGGGGTGAATGCACGTCAGTGGAGGCAGAATCATTCTGTCTGAATGAATGGAGTTTCCAGGCCCCCACTGGCCCTCTGTGTGAGGGTCTGCAGGGTTTGGCAGGACAGGTCTTTCTCTCCGGCGAGAGCACCCACCCTGACCGGCTGCTGGATGAGGGCACCAAAGCTCGCTAGGGAGGGCTCTGTCCTTAGGGAGGAGCTGCGGAATCCCTGCAGCTGTGCCCCCAGGCCCTGCCTTGCACACTTCCTGCAGCCAGGGCGCCCCTGGGGAGGTCAGGGCAGGCCGGGGAGGCTGAGGCCCACCTGCCATAGTGGGCAGGTGCGGGAGCCAGGGCGGCAGTGGCCTCGGGGCTGGGTGGGGCGCCTGGCCTCTGGTCTCTGGAGCAGTCAGGGGCTCTGCAGACGCTGAGAGGCCTGCTCATAGTGGACTGGGAGATGCTGGAGCAGCCTCAGAGCCATGGCCGGCCCACAGCGGGAGACGGCCCTGCTGCTGCCCCTCTGCCTGTGCGTGTGCACCTGTGGGCACCTGCGTGTGCTGGGGCAGGCAGGGCTGTATTGGGACCAGGTCCCGTAACAGCCTGCCTGCTTACCGTCTGCTCCCATCCCTGGGGAAAGCAAGGGAGCTCGGGGTCCTAGGACCTGACCTCAGCGCTCACCCCCACCAGCACCACAGTCACCAGGACTCTGTGACTCAGTTTACCCCACGAGAGCCCCTGGGATTCCCAGGGCATCAGAAGGCCCATCAGCCTCCCGTGAACTGCTGGGGTGGGCCTGGCCTTGGGACGCGGGTGCAGGGGCCTCTCCTCACTGCCCCATGGCACCCACAGCCAGTGCCAGAGCCTGCTGCAGCCCCGACCCGGCAGAGCAAGCGGCTCTGCTACCTCAGCCACGTAGCTGATGGCATCCTTCAGGTTCAGCTCGTGGAAGACATTCAGGATCCGGTCTCGAGACTTCTGGGCCGACCGTCTCATGAGGACCCTGCTGAGGAACTTCCTGTCGAAGTGGGACCACCTGTAGGGACAGACCTTGGGTGTGAGCCTCAGGTGACAGGCGCCCTAGAGCCCGCCGGACGCGTGGCCCGGCCCCTTCTCTCCTGAATTTTGTTTGCTATAGTGACCCTGTAGGCGCGTTTAAAATGAGGGAAGCAGCCCCTGCCACACGCCCAGGCCGTCCGCCGTTCTCCCGCCTGTCCTGTTGGATGGAGGCCGTTAGACGCATATGAAACTGCATGCCGCCTCCTCCAGAGGGTGGCTCAGGACACGGTGGGTGTCAGGCCTGGTCAGGCAAGGGGGCTTTGGCCACATGGGGGGCACCTTCAGGTGCACAGGAGGAAGGGCAGGGGCGGACAGACACCCTGAGCCCTTAGACTTGTGGGAGCCAAGCTGACCAGAGTGAGGTTTTTTTTAGCCTAACGGAATTAGAGTATTCGCTGGTTATCCAGATCAGAAGGGACGGTGGCCTGGCCGGACTTAGAGGAAACTCTGGGGCACAAGGAGGTGATGCCTGTCACTTGGACATGGGTGCAGCCGCCAGAGCCGCCCTCCAGGGCACAGGGTGGGCCCGGGTGAGCTTGTGTGCTCACACCTGGGCAGGCCCCGCGGCAGCAATGGCAGCTCTCCTGTACAGGCTGAGTTTCAGCCACACCAAGAAGTCAAAGCTAACCGAGGCTGTGCCTTCCGAGACCCCCGGGATGGCCCCTGGGAGGCCAAGGAGTCGGGGACTGGGTACCCGGAGCAGAGTCACTGTGGCCACGGAGAACCGCAGCTGAGCTTTATGAAGCCACGTGGCCACACCTCCCGGTGCCTCCACCCCAAGCAAACACAGATCGCTCAGAAAATGGGAACCCAGGGCAAATTGTATGTGCTCCTTACTGGGTTTATTATAAGTGTCACATGTTTTTTATAATAAAACATAGGTGATTTCACCTTAA</dnaseq>|
 
}}
 
}}
[[Category:Antisense]][[Category:lnc-EXOC3-1]][[Category:NONHSAG039632]][[Category:ENSG00000225138.3]]
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[[Category:Antisense]][[Category:lnc-EXOC3-1]][[Category:NONHSAG039632]][[Category:ENSG00000225138.3]][[Category:Transcripts]]

Revision as of 11:49, 16 October 2014

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000534918.1

Source

Gencode19

Same with

lnc-EXOC3-1:1,NONHSAT099892

Classification

antisense

Length

2762 nt

Genomic location

chr5+:478238..480999

Exon number

1

Exons

478238..480999

Genome context

Sequence
000001 CTCCCAGGGA AGCCCCCGGG GTCAGGTGGG TGCCGCTGTT CCCACTGAAG ATGCGGCCCC CAGTTCACTG CCCACTCGGG 000080
000081 GGGGATTTGA GGGTCATTGG TTCTGAGGGC CCTCCGCCTG CTCTTTTGCT TCTAAATCCA GCATCTTCTG TATGACCTTT 000160
000161 GTCCCGCTCC TGCCACCCCA CGAAGACAGA CGTGAGGGTC AGGGGAGCCA CGGTGCTAAC TGCCACTCTG GGCGGGCACA 000240
000241 GGCGAGGGCT GTGCAGCACC CGGGCACGTG GGGTCTTCGG AGGGGCTGCT CCCCACACCA CTTCCCCTGC CCCTGCCGAG 000320
000321 CCCTGCCGTG GGGTGGGGGG GCGCAGGGAG AGAAAGCAGC CGCCCTGGGT GAGAGCCAGG AGGGACACTG GGCAGGCAGA 000400
000401 TGCCACCCCA GGTGTGGGGA CCCCCGCTAC TGAGTGGCCG GGAGGAGCCC ACAGGCTCCC CACATGCAGC TGAGCCCAGG 000480
000481 GTTGTGGTCG TGGGTCGTGG GTCAAGGATG GTGGCTGGTG TGGTTGGGGG AGAGGCTCAA GGCCCGCCTG CCAACCTTGT 000560
000561 CACCTATGTG GGGGTGAGGG GAGCCCGCCA GAGGCCAGAG CCCCCACTGT CCCTTCCCAC CCTCCAGCCA GGCTCCAGGC 000640
000641 CTCCTAGGGC CAGAGTATCT GAGCTTTCTC TCGCTTGCCG GGCCTGTGGT TTGGGGGTTT GTGTGGAGCC TGGTCCAGGA 000720
000721 GCCCTCCTTC CTGATCTGCA CTGGCTGGCC CTCCTGACAG CCCCAGGCCC CCGTGCCCTC TGCCAGGAGG TGCCTTGCCA 000800
000801 CTTGGCATGG CCCCAGTCAC GGGTGGCACA TCTGGGGTGA ATGCACGTCA GTGGAGGCAG AATCATTCTG TCTGAATGAA 000880
000881 TGGAGTTTCC AGGCCCCCAC TGGCCCTCTG TGTGAGGGTC TGCAGGGTTT GGCAGGACAG GTCTTTCTCT CCGGCGAGAG 000960
000961 CACCCACCCT GACCGGCTGC TGGATGAGGG CACCAAAGCT CGCTAGGGAG GGCTCTGTCC TTAGGGAGGA GCTGCGGAAT 001040
001041 CCCTGCAGCT GTGCCCCCAG GCCCTGCCTT GCACACTTCC TGCAGCCAGG GCGCCCCTGG GGAGGTCAGG GCAGGCCGGG 001120
001121 GAGGCTGAGG CCCACCTGCC ATAGTGGGCA GGTGCGGGAG CCAGGGCGGC AGTGGCCTCG GGGCTGGGTG GGGCGCCTGG 001200
001201 CCTCTGGTCT CTGGAGCAGT CAGGGGCTCT GCAGACGCTG AGAGGCCTGC TCATAGTGGA CTGGGAGATG CTGGAGCAGC 001280
001281 CTCAGAGCCA TGGCCGGCCC ACAGCGGGAG ACGGCCCTGC TGCTGCCCCT CTGCCTGTGC GTGTGCACCT GTGGGCACCT 001360
001361 GCGTGTGCTG GGGCAGGCAG GGCTGTATTG GGACCAGGTC CCGTAACAGC CTGCCTGCTT ACCGTCTGCT CCCATCCCTG 001440
001441 GGGAAAGCAA GGGAGCTCGG GGTCCTAGGA CCTGACCTCA GCGCTCACCC CCACCAGCAC CACAGTCACC AGGACTCTGT 001520
001521 GACTCAGTTT ACCCCACGAG AGCCCCTGGG ATTCCCAGGG CATCAGAAGG CCCATCAGCC TCCCGTGAAC TGCTGGGGTG 001600
001601 GGCCTGGCCT TGGGACGCGG GTGCAGGGGC CTCTCCTCAC TGCCCCATGG CACCCACAGC CAGTGCCAGA GCCTGCTGCA 001680
001681 GCCCCGACCC GGCAGAGCAA GCGGCTCTGC TACCTCAGCC ACGTAGCTGA TGGCATCCTT CAGGTTCAGC TCGTGGAAGA 001760
001761 CATTCAGGAT CCGGTCTCGA GACTTCTGGG CCGACCGTCT CATGAGGACC CTGCTGAGGA ACTTCCTGTC GAAGTGGGAC 001840
001841 CACCTGTAGG GACAGACCTT GGGTGTGAGC CTCAGGTGAC AGGCGCCCTA GAGCCCGCCG GACGCGTGGC CCGGCCCCTT 001920
001921 CTCTCCTGAA TTTTGTTTGC TATAGTGACC CTGTAGGCGC GTTTAAAATG AGGGAAGCAG CCCCTGCCAC ACGCCCAGGC 002000
002001 CGTCCGCCGT TCTCCCGCCT GTCCTGTTGG ATGGAGGCCG TTAGACGCAT ATGAAACTGC ATGCCGCCTC CTCCAGAGGG 002080
002081 TGGCTCAGGA CACGGTGGGT GTCAGGCCTG GTCAGGCAAG GGGGCTTTGG CCACATGGGG GGCACCTTCA GGTGCACAGG 002160
002161 AGGAAGGGCA GGGGCGGACA GACACCCTGA GCCCTTAGAC TTGTGGGAGC CAAGCTGACC AGAGTGAGGT TTTTTTTAGC 002240
002241 CTAACGGAAT TAGAGTATTC GCTGGTTATC CAGATCAGAA GGGACGGTGG CCTGGCCGGA CTTAGAGGAA ACTCTGGGGC 002320
002321 ACAAGGAGGT GATGCCTGTC ACTTGGACAT GGGTGCAGCC GCCAGAGCCG CCCTCCAGGG CACAGGGTGG GCCCGGGTGA 002400
002401 GCTTGTGTGC TCACACCTGG GCAGGCCCCG CGGCAGCAAT GGCAGCTCTC CTGTACAGGC TGAGTTTCAG CCACACCAAG 002480
002481 AAGTCAAAGC TAACCGAGGC TGTGCCTTCC GAGACCCCCG GGATGGCCCC TGGGAGGCCA AGGAGTCGGG GACTGGGTAC 002560
002561 CCGGAGCAGA GTCACTGTGG CCACGGAGAA CCGCAGCTGA GCTTTATGAA GCCACGTGGC CACACCTCCC GGTGCCTCCA 002640
002641 CCCCAAGCAA ACACAGATCG CTCAGAAAAT GGGAACCCAG GGCAAATTGT ATGTGCTCCT TACTGGGTTT ATTATAAGTG 002720
002721 TCACATGTTT TTTATAATAA AACATAGGTG ATTTCACCTT AA
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