Difference between revisions of "ENST00000534918.1"
Line 42: | Line 42: | ||
sequence = <dnaseq>CTCCCAGGGAAGCCCCCGGGGTCAGGTGGGTGCCGCTGTTCCCACTGAAGATGCGGCCCCCAGTTCACTGCCCACTCGGGGGGGATTTGAGGGTCATTGGTTCTGAGGGCCCTCCGCCTGCTCTTTTGCTTCTAAATCCAGCATCTTCTGTATGACCTTTGTCCCGCTCCTGCCACCCCACGAAGACAGACGTGAGGGTCAGGGGAGCCACGGTGCTAACTGCCACTCTGGGCGGGCACAGGCGAGGGCTGTGCAGCACCCGGGCACGTGGGGTCTTCGGAGGGGCTGCTCCCCACACCACTTCCCCTGCCCCTGCCGAGCCCTGCCGTGGGGTGGGGGGGCGCAGGGAGAGAAAGCAGCCGCCCTGGGTGAGAGCCAGGAGGGACACTGGGCAGGCAGATGCCACCCCAGGTGTGGGGACCCCCGCTACTGAGTGGCCGGGAGGAGCCCACAGGCTCCCCACATGCAGCTGAGCCCAGGGTTGTGGTCGTGGGTCGTGGGTCAAGGATGGTGGCTGGTGTGGTTGGGGGAGAGGCTCAAGGCCCGCCTGCCAACCTTGTCACCTATGTGGGGGTGAGGGGAGCCCGCCAGAGGCCAGAGCCCCCACTGTCCCTTCCCACCCTCCAGCCAGGCTCCAGGCCTCCTAGGGCCAGAGTATCTGAGCTTTCTCTCGCTTGCCGGGCCTGTGGTTTGGGGGTTTGTGTGGAGCCTGGTCCAGGAGCCCTCCTTCCTGATCTGCACTGGCTGGCCCTCCTGACAGCCCCAGGCCCCCGTGCCCTCTGCCAGGAGGTGCCTTGCCACTTGGCATGGCCCCAGTCACGGGTGGCACATCTGGGGTGAATGCACGTCAGTGGAGGCAGAATCATTCTGTCTGAATGAATGGAGTTTCCAGGCCCCCACTGGCCCTCTGTGTGAGGGTCTGCAGGGTTTGGCAGGACAGGTCTTTCTCTCCGGCGAGAGCACCCACCCTGACCGGCTGCTGGATGAGGGCACCAAAGCTCGCTAGGGAGGGCTCTGTCCTTAGGGAGGAGCTGCGGAATCCCTGCAGCTGTGCCCCCAGGCCCTGCCTTGCACACTTCCTGCAGCCAGGGCGCCCCTGGGGAGGTCAGGGCAGGCCGGGGAGGCTGAGGCCCACCTGCCATAGTGGGCAGGTGCGGGAGCCAGGGCGGCAGTGGCCTCGGGGCTGGGTGGGGCGCCTGGCCTCTGGTCTCTGGAGCAGTCAGGGGCTCTGCAGACGCTGAGAGGCCTGCTCATAGTGGACTGGGAGATGCTGGAGCAGCCTCAGAGCCATGGCCGGCCCACAGCGGGAGACGGCCCTGCTGCTGCCCCTCTGCCTGTGCGTGTGCACCTGTGGGCACCTGCGTGTGCTGGGGCAGGCAGGGCTGTATTGGGACCAGGTCCCGTAACAGCCTGCCTGCTTACCGTCTGCTCCCATCCCTGGGGAAAGCAAGGGAGCTCGGGGTCCTAGGACCTGACCTCAGCGCTCACCCCCACCAGCACCACAGTCACCAGGACTCTGTGACTCAGTTTACCCCACGAGAGCCCCTGGGATTCCCAGGGCATCAGAAGGCCCATCAGCCTCCCGTGAACTGCTGGGGTGGGCCTGGCCTTGGGACGCGGGTGCAGGGGCCTCTCCTCACTGCCCCATGGCACCCACAGCCAGTGCCAGAGCCTGCTGCAGCCCCGACCCGGCAGAGCAAGCGGCTCTGCTACCTCAGCCACGTAGCTGATGGCATCCTTCAGGTTCAGCTCGTGGAAGACATTCAGGATCCGGTCTCGAGACTTCTGGGCCGACCGTCTCATGAGGACCCTGCTGAGGAACTTCCTGTCGAAGTGGGACCACCTGTAGGGACAGACCTTGGGTGTGAGCCTCAGGTGACAGGCGCCCTAGAGCCCGCCGGACGCGTGGCCCGGCCCCTTCTCTCCTGAATTTTGTTTGCTATAGTGACCCTGTAGGCGCGTTTAAAATGAGGGAAGCAGCCCCTGCCACACGCCCAGGCCGTCCGCCGTTCTCCCGCCTGTCCTGTTGGATGGAGGCCGTTAGACGCATATGAAACTGCATGCCGCCTCCTCCAGAGGGTGGCTCAGGACACGGTGGGTGTCAGGCCTGGTCAGGCAAGGGGGCTTTGGCCACATGGGGGGCACCTTCAGGTGCACAGGAGGAAGGGCAGGGGCGGACAGACACCCTGAGCCCTTAGACTTGTGGGAGCCAAGCTGACCAGAGTGAGGTTTTTTTTAGCCTAACGGAATTAGAGTATTCGCTGGTTATCCAGATCAGAAGGGACGGTGGCCTGGCCGGACTTAGAGGAAACTCTGGGGCACAAGGAGGTGATGCCTGTCACTTGGACATGGGTGCAGCCGCCAGAGCCGCCCTCCAGGGCACAGGGTGGGCCCGGGTGAGCTTGTGTGCTCACACCTGGGCAGGCCCCGCGGCAGCAATGGCAGCTCTCCTGTACAGGCTGAGTTTCAGCCACACCAAGAAGTCAAAGCTAACCGAGGCTGTGCCTTCCGAGACCCCCGGGATGGCCCCTGGGAGGCCAAGGAGTCGGGGACTGGGTACCCGGAGCAGAGTCACTGTGGCCACGGAGAACCGCAGCTGAGCTTTATGAAGCCACGTGGCCACACCTCCCGGTGCCTCCACCCCAAGCAAACACAGATCGCTCAGAAAATGGGAACCCAGGGCAAATTGTATGTGCTCCTTACTGGGTTTATTATAAGTGTCACATGTTTTTTATAATAAAACATAGGTGATTTCACCTTAA</dnaseq>| | sequence = <dnaseq>CTCCCAGGGAAGCCCCCGGGGTCAGGTGGGTGCCGCTGTTCCCACTGAAGATGCGGCCCCCAGTTCACTGCCCACTCGGGGGGGATTTGAGGGTCATTGGTTCTGAGGGCCCTCCGCCTGCTCTTTTGCTTCTAAATCCAGCATCTTCTGTATGACCTTTGTCCCGCTCCTGCCACCCCACGAAGACAGACGTGAGGGTCAGGGGAGCCACGGTGCTAACTGCCACTCTGGGCGGGCACAGGCGAGGGCTGTGCAGCACCCGGGCACGTGGGGTCTTCGGAGGGGCTGCTCCCCACACCACTTCCCCTGCCCCTGCCGAGCCCTGCCGTGGGGTGGGGGGGCGCAGGGAGAGAAAGCAGCCGCCCTGGGTGAGAGCCAGGAGGGACACTGGGCAGGCAGATGCCACCCCAGGTGTGGGGACCCCCGCTACTGAGTGGCCGGGAGGAGCCCACAGGCTCCCCACATGCAGCTGAGCCCAGGGTTGTGGTCGTGGGTCGTGGGTCAAGGATGGTGGCTGGTGTGGTTGGGGGAGAGGCTCAAGGCCCGCCTGCCAACCTTGTCACCTATGTGGGGGTGAGGGGAGCCCGCCAGAGGCCAGAGCCCCCACTGTCCCTTCCCACCCTCCAGCCAGGCTCCAGGCCTCCTAGGGCCAGAGTATCTGAGCTTTCTCTCGCTTGCCGGGCCTGTGGTTTGGGGGTTTGTGTGGAGCCTGGTCCAGGAGCCCTCCTTCCTGATCTGCACTGGCTGGCCCTCCTGACAGCCCCAGGCCCCCGTGCCCTCTGCCAGGAGGTGCCTTGCCACTTGGCATGGCCCCAGTCACGGGTGGCACATCTGGGGTGAATGCACGTCAGTGGAGGCAGAATCATTCTGTCTGAATGAATGGAGTTTCCAGGCCCCCACTGGCCCTCTGTGTGAGGGTCTGCAGGGTTTGGCAGGACAGGTCTTTCTCTCCGGCGAGAGCACCCACCCTGACCGGCTGCTGGATGAGGGCACCAAAGCTCGCTAGGGAGGGCTCTGTCCTTAGGGAGGAGCTGCGGAATCCCTGCAGCTGTGCCCCCAGGCCCTGCCTTGCACACTTCCTGCAGCCAGGGCGCCCCTGGGGAGGTCAGGGCAGGCCGGGGAGGCTGAGGCCCACCTGCCATAGTGGGCAGGTGCGGGAGCCAGGGCGGCAGTGGCCTCGGGGCTGGGTGGGGCGCCTGGCCTCTGGTCTCTGGAGCAGTCAGGGGCTCTGCAGACGCTGAGAGGCCTGCTCATAGTGGACTGGGAGATGCTGGAGCAGCCTCAGAGCCATGGCCGGCCCACAGCGGGAGACGGCCCTGCTGCTGCCCCTCTGCCTGTGCGTGTGCACCTGTGGGCACCTGCGTGTGCTGGGGCAGGCAGGGCTGTATTGGGACCAGGTCCCGTAACAGCCTGCCTGCTTACCGTCTGCTCCCATCCCTGGGGAAAGCAAGGGAGCTCGGGGTCCTAGGACCTGACCTCAGCGCTCACCCCCACCAGCACCACAGTCACCAGGACTCTGTGACTCAGTTTACCCCACGAGAGCCCCTGGGATTCCCAGGGCATCAGAAGGCCCATCAGCCTCCCGTGAACTGCTGGGGTGGGCCTGGCCTTGGGACGCGGGTGCAGGGGCCTCTCCTCACTGCCCCATGGCACCCACAGCCAGTGCCAGAGCCTGCTGCAGCCCCGACCCGGCAGAGCAAGCGGCTCTGCTACCTCAGCCACGTAGCTGATGGCATCCTTCAGGTTCAGCTCGTGGAAGACATTCAGGATCCGGTCTCGAGACTTCTGGGCCGACCGTCTCATGAGGACCCTGCTGAGGAACTTCCTGTCGAAGTGGGACCACCTGTAGGGACAGACCTTGGGTGTGAGCCTCAGGTGACAGGCGCCCTAGAGCCCGCCGGACGCGTGGCCCGGCCCCTTCTCTCCTGAATTTTGTTTGCTATAGTGACCCTGTAGGCGCGTTTAAAATGAGGGAAGCAGCCCCTGCCACACGCCCAGGCCGTCCGCCGTTCTCCCGCCTGTCCTGTTGGATGGAGGCCGTTAGACGCATATGAAACTGCATGCCGCCTCCTCCAGAGGGTGGCTCAGGACACGGTGGGTGTCAGGCCTGGTCAGGCAAGGGGGCTTTGGCCACATGGGGGGCACCTTCAGGTGCACAGGAGGAAGGGCAGGGGCGGACAGACACCCTGAGCCCTTAGACTTGTGGGAGCCAAGCTGACCAGAGTGAGGTTTTTTTTAGCCTAACGGAATTAGAGTATTCGCTGGTTATCCAGATCAGAAGGGACGGTGGCCTGGCCGGACTTAGAGGAAACTCTGGGGCACAAGGAGGTGATGCCTGTCACTTGGACATGGGTGCAGCCGCCAGAGCCGCCCTCCAGGGCACAGGGTGGGCCCGGGTGAGCTTGTGTGCTCACACCTGGGCAGGCCCCGCGGCAGCAATGGCAGCTCTCCTGTACAGGCTGAGTTTCAGCCACACCAAGAAGTCAAAGCTAACCGAGGCTGTGCCTTCCGAGACCCCCGGGATGGCCCCTGGGAGGCCAAGGAGTCGGGGACTGGGTACCCGGAGCAGAGTCACTGTGGCCACGGAGAACCGCAGCTGAGCTTTATGAAGCCACGTGGCCACACCTCCCGGTGCCTCCACCCCAAGCAAACACAGATCGCTCAGAAAATGGGAACCCAGGGCAAATTGTATGTGCTCCTTACTGGGTTTATTATAAGTGTCACATGTTTTTTATAATAAAACATAGGTGATTTCACCTTAA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Antisense]][[Category:lnc-EXOC3-1]][[Category:NONHSAG039632]][[Category:ENSG00000225138.3]] | + | [[Category:Antisense]][[Category:lnc-EXOC3-1]][[Category:NONHSAG039632]][[Category:ENSG00000225138.3]][[Category:Transcripts]] |
Revision as of 11:49, 16 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
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You can also add sub-section(s) at will.
Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000534918.1 |
Source |
Gencode19 |
Same with |
lnc-EXOC3-1:1,NONHSAT099892 |
Classification |
antisense |
Length |
2762 nt |
Genomic location |
chr5+:478238..480999 |
Exon number |
1 |
Exons |
478238..480999 |
Genome context |
|
Sequence |
000001 CTCCCAGGGA AGCCCCCGGG GTCAGGTGGG TGCCGCTGTT CCCACTGAAG ATGCGGCCCC CAGTTCACTG CCCACTCGGG 000080
000081 GGGGATTTGA GGGTCATTGG TTCTGAGGGC CCTCCGCCTG CTCTTTTGCT TCTAAATCCA GCATCTTCTG TATGACCTTT 000160 000161 GTCCCGCTCC TGCCACCCCA CGAAGACAGA CGTGAGGGTC AGGGGAGCCA CGGTGCTAAC TGCCACTCTG GGCGGGCACA 000240 000241 GGCGAGGGCT GTGCAGCACC CGGGCACGTG GGGTCTTCGG AGGGGCTGCT CCCCACACCA CTTCCCCTGC CCCTGCCGAG 000320 000321 CCCTGCCGTG GGGTGGGGGG GCGCAGGGAG AGAAAGCAGC CGCCCTGGGT GAGAGCCAGG AGGGACACTG GGCAGGCAGA 000400 000401 TGCCACCCCA GGTGTGGGGA CCCCCGCTAC TGAGTGGCCG GGAGGAGCCC ACAGGCTCCC CACATGCAGC TGAGCCCAGG 000480 000481 GTTGTGGTCG TGGGTCGTGG GTCAAGGATG GTGGCTGGTG TGGTTGGGGG AGAGGCTCAA GGCCCGCCTG CCAACCTTGT 000560 000561 CACCTATGTG GGGGTGAGGG GAGCCCGCCA GAGGCCAGAG CCCCCACTGT CCCTTCCCAC CCTCCAGCCA GGCTCCAGGC 000640 000641 CTCCTAGGGC CAGAGTATCT GAGCTTTCTC TCGCTTGCCG GGCCTGTGGT TTGGGGGTTT GTGTGGAGCC TGGTCCAGGA 000720 000721 GCCCTCCTTC CTGATCTGCA CTGGCTGGCC CTCCTGACAG CCCCAGGCCC CCGTGCCCTC TGCCAGGAGG TGCCTTGCCA 000800 000801 CTTGGCATGG CCCCAGTCAC GGGTGGCACA TCTGGGGTGA ATGCACGTCA GTGGAGGCAG AATCATTCTG TCTGAATGAA 000880 000881 TGGAGTTTCC AGGCCCCCAC TGGCCCTCTG TGTGAGGGTC TGCAGGGTTT GGCAGGACAG GTCTTTCTCT CCGGCGAGAG 000960 000961 CACCCACCCT GACCGGCTGC TGGATGAGGG CACCAAAGCT CGCTAGGGAG GGCTCTGTCC TTAGGGAGGA GCTGCGGAAT 001040 001041 CCCTGCAGCT GTGCCCCCAG GCCCTGCCTT GCACACTTCC TGCAGCCAGG GCGCCCCTGG GGAGGTCAGG GCAGGCCGGG 001120 001121 GAGGCTGAGG CCCACCTGCC ATAGTGGGCA GGTGCGGGAG CCAGGGCGGC AGTGGCCTCG GGGCTGGGTG GGGCGCCTGG 001200 001201 CCTCTGGTCT CTGGAGCAGT CAGGGGCTCT GCAGACGCTG AGAGGCCTGC TCATAGTGGA CTGGGAGATG CTGGAGCAGC 001280 001281 CTCAGAGCCA TGGCCGGCCC ACAGCGGGAG ACGGCCCTGC TGCTGCCCCT CTGCCTGTGC GTGTGCACCT GTGGGCACCT 001360 001361 GCGTGTGCTG GGGCAGGCAG GGCTGTATTG GGACCAGGTC CCGTAACAGC CTGCCTGCTT ACCGTCTGCT CCCATCCCTG 001440 001441 GGGAAAGCAA GGGAGCTCGG GGTCCTAGGA CCTGACCTCA GCGCTCACCC CCACCAGCAC CACAGTCACC AGGACTCTGT 001520 001521 GACTCAGTTT ACCCCACGAG AGCCCCTGGG ATTCCCAGGG CATCAGAAGG CCCATCAGCC TCCCGTGAAC TGCTGGGGTG 001600 001601 GGCCTGGCCT TGGGACGCGG GTGCAGGGGC CTCTCCTCAC TGCCCCATGG CACCCACAGC CAGTGCCAGA GCCTGCTGCA 001680 001681 GCCCCGACCC GGCAGAGCAA GCGGCTCTGC TACCTCAGCC ACGTAGCTGA TGGCATCCTT CAGGTTCAGC TCGTGGAAGA 001760 001761 CATTCAGGAT CCGGTCTCGA GACTTCTGGG CCGACCGTCT CATGAGGACC CTGCTGAGGA ACTTCCTGTC GAAGTGGGAC 001840 001841 CACCTGTAGG GACAGACCTT GGGTGTGAGC CTCAGGTGAC AGGCGCCCTA GAGCCCGCCG GACGCGTGGC CCGGCCCCTT 001920 001921 CTCTCCTGAA TTTTGTTTGC TATAGTGACC CTGTAGGCGC GTTTAAAATG AGGGAAGCAG CCCCTGCCAC ACGCCCAGGC 002000 002001 CGTCCGCCGT TCTCCCGCCT GTCCTGTTGG ATGGAGGCCG TTAGACGCAT ATGAAACTGC ATGCCGCCTC CTCCAGAGGG 002080 002081 TGGCTCAGGA CACGGTGGGT GTCAGGCCTG GTCAGGCAAG GGGGCTTTGG CCACATGGGG GGCACCTTCA GGTGCACAGG 002160 002161 AGGAAGGGCA GGGGCGGACA GACACCCTGA GCCCTTAGAC TTGTGGGAGC CAAGCTGACC AGAGTGAGGT TTTTTTTAGC 002240 002241 CTAACGGAAT TAGAGTATTC GCTGGTTATC CAGATCAGAA GGGACGGTGG CCTGGCCGGA CTTAGAGGAA ACTCTGGGGC 002320 002321 ACAAGGAGGT GATGCCTGTC ACTTGGACAT GGGTGCAGCC GCCAGAGCCG CCCTCCAGGG CACAGGGTGG GCCCGGGTGA 002400 002401 GCTTGTGTGC TCACACCTGG GCAGGCCCCG CGGCAGCAAT GGCAGCTCTC CTGTACAGGC TGAGTTTCAG CCACACCAAG 002480 002481 AAGTCAAAGC TAACCGAGGC TGTGCCTTCC GAGACCCCCG GGATGGCCCC TGGGAGGCCA AGGAGTCGGG GACTGGGTAC 002560 002561 CCGGAGCAGA GTCACTGTGG CCACGGAGAA CCGCAGCTGA GCTTTATGAA GCCACGTGGC CACACCTCCC GGTGCCTCCA 002640 002641 CCCCAAGCAA ACACAGATCG CTCAGAAAAT GGGAACCCAG GGCAAATTGT ATGTGCTCCT TACTGGGTTT ATTATAAGTG 002720 002721 TCACATGTTT TTTATAATAA AACATAGGTG ATTTCACCTT AA |