ENST00000568654.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000568654.1

Source

Gencode19

Same with

lnc-SLC39A6-1:1

Classification

intergenic

Length

609 nt

Genomic location

chr18-:33759959..33767411

Exon number

2

Exons

33759959..33760353,33767198..33767411

Genome context

Sequence
000001 CCAGCCTCCC AGTCTCTCGG AATCCGCAGC CTAGGTGTGG CGCCCCGACC GGACTTTCAC TTCTGGCCAG CCCTTTCCCC 000080
000081 ACCTGGGCGC GGGAGCGGGT GCCAGTCTTT AAACAACCTC TCGATGGGTC CCACGAAGAT GTTTCCAGAC CCTTGGAATG 000160
000161 CCAAGTTCAA GTTTAGCTAT GTCTCGCGGA GAGGCCGGTG GAAGAAGCAA CGAGAATGAA GCACCCCAGT TCTCTGCTGA 000240
000241 GCACATGGGC ATCTGCAATA AAGATTTAAT TTCCCAGCTT CTCCTGAAGC TCGGTATGGC CACAACACTA AATTCTGCCC 000320
000321 GAGGAGATTA AGCAAAATAG TATGGGACTT CCAAGAAATG TTTTTAAAGT CAGGGGCAGG CCTTTCTTCA TGCCTTCTTC 000400
000401 CTCTTTGCTG GCTGGAACGC AAAGACCATG GCAGGAGGCC AAGCAGCCAT CCTGGAAGGT GAAAGCCTCA TACTAAGGAC 000480
000481 GTCAGACAGC GAAATAAGAG CCTGGGTCCT TGACCCTGTA GACATCTCCC TCCCCATCCT GGTCTGTCTG CCTTGACTCC 000560
000561 TTTCATATGA GAGAAATAAA CTTTTAACTT GCGTAAACCA GAAAGAAAA
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Predicted Small Protein

Name ENST00000568654.1_smProtein_341:475
Length 45
Molecular weight 5065.8777
Aromaticity 0.136363636364
Instability index 55.8386363636
Isoelectric point 11.5923461914
Runs 9
Runs residual 0.0414438502674
Runs probability 0.0420420420421
Amino acid sequence MGLPRNVFKVRGRPFFMPSSSLLAGTQRPWQEAKQPSWKVKASY
Secondary structure LLLLLLEEEELLLEEELLLLLLLLLLLLLHHHLLLLLEEEEELL
PRMN -
PiMo -