ENST00000576477.1
Revision as of 18:41, 15 October 2014 by 211.100.51.162 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000576477.1 |
Source |
Gencode19 |
Same with |
lnc-WDR16-3:1,NONHSAT145589 |
Classification |
intergenic |
Length |
513 nt |
Genomic location |
chr17+:9368059..9370739 |
Exon number |
2 |
Exons |
9368059..9368182,9370351..9370739 |
Genome context |
|
Sequence |
000001 TGACGGAGTC TCACTCTATC GTGGAGGCTG GAGTGCAGTG GAGCAATCTC AGCTCACTAC AACCTCTGCC TCCTGGATTC 000080
000081 AAGAAATTCT CCTGCCTCAG CCTCCCGAGT AGCTGGGATT ACAGGTGCCT GTCACCACGC CCGGCTAATT TTTGTATTTT 000160 000161 TAGTAGAGAT GGGGTTACAC CATGTTGGCC AGGCTGGTCT CGAACTCCTG ATCTCAGGTG ATCCACCCGC CTCAGCTTCC 000240 000241 CAAAGTGCTG GGATTATAGG TGTGAGCCAC CGTGCCCGGC CTTTTACATG CTTTTAACTC ATTTGATCCT CACAACAAAC 000320 000321 TCTGTGAGGT GGGTTCTTAT TTTTCCTACT TTATAAATGT GATAACTGAG GCGTACAGAA GTTAAGTAAT TTGCCAAATC 000400 000401 CTAGAGGCTT CCAGAGCTCT CTGTCTTAAT CACTAAGGCT ATGCTGTAGG GTCTGGAGGG TGAAAGCAGT ACCCAGCTTC 000480 000481 AGGACTGCAA CAGTGTTGCA GAGGATCCAG TCT |
Predicted Small Protein
Name | ENST00000576477.1_smProtein_287:355 |
Length | 23 |
Molecular weight | 2582.1535 |
Aromaticity | 0.0909090909091 |
Instability index | 42.4 |
Isoelectric point | 9.51995849609 |
Runs | 5 |
Runs residual | 0.00909090909091 |
Runs probability | 0.0593358063948 |
Amino acid sequence | MLLTHLILTTNSVRWVLIFPTL |
Secondary structure | LHHHHHHHHLLLLLEEEEELLL |
PRMN | LHHHHHHHHHHHHHHHHHHLLL |
PiMo | i????????????????????? |