ENST00000585536.1
Revision as of 08:00, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000585536.1 |
Source |
Gencode19 |
Same with |
NONHSAT053104 |
Classification |
intergenic |
Length |
396 nt |
Genomic location |
chr17-:33867058..33867816 |
Exon number |
2 |
Exons |
33867058..33867361,33867725..33867816 |
Genome context |
|
Sequence |
000001 GTGGGAAGAT GGCATGTGAG CGTGCCCTGC TTGTGCAGTT GCCAGTCACA GAACCCAGGA GGTCTGGAAA GCAAACCTCT 000080
000081 GTTTGGCCAA AGGAGATAAA AGTCCCACGT GAAAGATGCC CTCCCTGTAC CAGGAGAATA AAAAACATTC TTTGACGGGG 000160 000161 GTCATACCCA GGATAATTCT GTACAAACAG ACCTTGCTAA AATAACCCTT ATCTTACTTT GCCTTCACAC ATACTTTAAT 000240 000241 GTAATTACTT TTCTGCAGTT GTACTCTTTG CTCACCCTAC TATACAAGCA TTTAGGTTTC GGCACTTCTT TAGGTCTTGA 000320 000321 ATTTTCTATA GGGGCTCCTA TATGTAAAAA TCTGTATGTT TTTCTCTTGT TAATCTGTCA TAGGTCAAGT TAATTC |
Predicted Small Protein
Name | ENST00000585536.1_smProtein_8:154 |
Length | 49 |
Molecular weight | 5585.6478 |
Aromaticity | 0.0208333333333 |
Instability index | 97.9645833333 |
Isoelectric point | 10.4331665039 |
Runs | 7 |
Runs residual | 0.0197368421053 |
Runs probability | 0.035531329649 |
Amino acid sequence | MACERALLVQLPVTEPRRSGKQTSVWPKEIKVPRERCPPCTRRIKNIL |
Secondary structure | LLLLLEEEELLLLLLLLLLLLLLEELLLLLLLLLLLLLLLHHHHHHLL |
PRMN | - |
PiMo | - |