ENST00000591297.1
Revision as of 05:57, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000591297.1 |
Source |
Gencode19 |
Same with |
NONHSAT114899 |
Classification |
antisense |
Length |
769 nt |
Genomic location |
chr6-:130454657..130459341 |
Exon number |
2 |
Exons |
130454657..130454864,130458781..130459341 |
Genome context |
|
Sequence |
000001 CTAAACAAGG CTGATATAAT TAAATTGCTA CTTCTTAAGA TTTTCCTCTC TCCTTTAAAA ATGAAAGACC TGTAAATATA 000080
000081 GACTGCCTAA ATGCTTCATC AGTAAGAACT GGAGTCATCT TACACAACTT CTTCAAGTAA CAATTATGTG GAAAAAGTGT 000160 000161 GCTAATTTCA GTAAAAAGAC ATCCTGCTGT TGTAAACTAG AAGGAAAGAC GTTCCAGTGT TAATCTCCAA GTGTAGCACC 000240 000241 GTTAAGCGGC AGGTATGAGA AATGTTCTCC TGTTTTCTGG AAACATTGGT CTGTTCTCAT TTGCTTGTGC TATGACAGTC 000320 000321 CTCTGATAAA GCAAGGTCAG GAAGAAAGGC AGATCTATTA ACACTTCGCT CAACCAAGGC AGACCTTAGT ACAATGGACA 000400 000401 GCCTTATAGA AGTCTTCTAA GTCATTAATG AAAATGTCAA CTGACATTCC CAAGGAGCCC ACTACAAAGG CTGACTGGTT 000480 000481 TATTACAACC TTGGCCCTAC TGAAGGCCTG GCGCAGACAG CAAGTCTCCT TCTGAAACTA TGTAAGAGTA TAACACAACA 000560 000561 GAAAAAAAAA GACTAAACGC TACCTACGCT CAATGTTCCA CACCTCTTAA GCCAGTAATC CTGTATCTGG TGTCGGGCAG 000640 000641 CAAAGAAAAT AAAATATACC TCGTCTGTGC TCCATTTGGA AACTTTACTG GCAGGGATTC CTGCGACAGT TGGAAGAAGT 000720 000721 TTGCTTTGCT GCTCCCAGCG CAAGGGCAGA CATGGAATTG GGGACTTAA |
Predicted Small Protein
Name | ENST00000591297.1_smProtein_254:325 |
Length | 24 |
Molecular weight | 2505.0294 |
Aromaticity | 0.130434782609 |
Instability index | 44.9173913043 |
Isoelectric point | 7.99981689453 |
Runs | 5 |
Runs residual | 0.0103519668737 |
Runs probability | 0.0355060943297 |
Amino acid sequence | MRNVLLFSGNIGLFSFACAMTVL |
Secondary structure | LEEEEEELLLHHHHHHHHHHHLL |
PRMN | LLLLHHHHHHHHHHHHHHHHHHL |
PiMo | iiiiTTTTTTTTTTTTTTTTTTo |