ENST00000594299.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000594299.1

Source

Gencode19

Same with

,

Classification

intronic(S)

Length

1890 nt

Genomic location

chr19+:38675016..38676905

Exon number

1

Exons

38675016..38676905

Genome context

Sequence
000001 CCATGTTAGT CAGGCTGGTC TTGAACTCCT GGTATCAAGT GATCTGCCCG CCTGAGCCTC CCAAAGTGCT GGGATTACAG 000080
000081 GCGTGAGCCA CTGCGCCCGG CCCCTGTCCT CCCCCTTTTA CAGATGAGGC AGCTGAGGCC CAGAGTCACA GGGCTGGTGA 000160
000161 GGAACACAGC CTGGATCAGA GCCCAGGAAG CCTGGGTCAA GGCTCACGTC TCTTGAGTGA GGGGCTCTGC CCTCCTCCAT 000240
000241 CCTGTTCTTT GTAGTGTCAT CTTTCATGAC CTACATGGAG ACATTCAAAT CCGGGGATGA CACAGAGCTT GGAGGGAGAG 000320
000321 ACGTGTCAGG AGACAGAAAC AGTGTCCCTG GAGATATCAG CAGGCAAGTG TGCTGAGCTC ACACTGAGAG CCAGAGGGGA 000400
000401 TTCTGAAAAC TAGACTGATG ATTAAAACTG CTTAAAAACT CAGCAGCCTC CCCATGCTCC CGGGATTAAT GATGCAGGCT 000480
000481 CACATTGACT ACACACGTTT ATACCAGGCG CCATGTTCTT TGCCGAAACT CCCGCTCAGA GCCTGGATGA TCTGCCCCTC 000560
000561 ACCTCTGCCC TCGTTCCCAT CCACTCTCCC CTCCTTGCTC TGTTCCAGCC ACACTGGCCT CTTGCTGTTC CTCACACTCT 000640
000641 CCACGTCCAG GCACACCCCA GGGCCTTTGC ACTGGCTCTC ACTGCTGCCT CCAGTGAGCT CCCTCCAGAT CTTCTTGGGT 000720
000721 GCAGCTCATG AGGACTCGCT CTAATGCCAC CCCCTCAAAC AGGTCCTCCT GGCCTTCAGT AGCCCAGGCT GTCATTCTGT 000800
000801 GTCACTGTAC TCTGTTCCAC ATCCCGTGTC CCCCATGGGA AACAGGTGCC ACCGTCTTAG TCACAAGGCA CTTGTAACGT 000880
000881 GCCTGGCACA CAGGGCATGC TCCATCCTGA ACATAAGACG TGTGGATCTT GTTTGATTCT CACGTGACCC CAATAAGTAG 000960
000961 ATACTATAAG GCCCCCACTT TTCAGTGTGG CCCAAGTTGG GCCCTGCTGA ACCCTGTTAC CCTCCTCAAC AATCACCCGT 001040
001041 ACACACTGCT TCCTCTGCCT GGAACCCACC CCCCAACCCG CACCCCCACT CTAGGCCCAC TCCTGCCCAC CCATGTTAAT 001120
001121 TTGCTGGGGC AGCCGCAACA AACTACCACA CACTGAGTGG CTTAAACTGC AGAAATGTAT CATCTCACAG TTGCGGAGGC 001200
001201 CAGAAGTCCA AGTTCCAGGC GTCAACAGGG TGGTTCCCTC CAAGGGCGGT GAGGGAGAAC CTGTTCCTGG CCTCCCTCTT 001280
001281 AGCAGCCGGT GGGTGTCAGC ACGTAGATTC ATCACCCCCG TCTCTACCTC CTCTTCGCAT GATGTTCTCC CTGCATCTGT 001360
001361 GCCCACATTT CCTCTTTCTG CAAGGACGCC AATCTAACGG GATTAGGGGT CTACCCTAAT GACCTCATTT TCACTTGATT 001440
001441 GCCTCTGTAA AGACTCTGTC TCCAAATGAG GTCACATTTG GAGATGCTGG GGCTTAGGAC TTCAATGTAG CTTTTTGTGG 001520
001521 GGCCCCAGTT CAACCCATAA CACCACTCCT TGGGTATCAA CACAGACACG CCTTTCTTGC AGAAGTTGTC TGAACCCCCA 001600
001601 CACCAGGCTC AGCCCACCCC CAGCACCTGT CCCAGGGCAC AGCGACCGCC ACTCCCTTGG CAACTTGCTT CCTCTCTGTC 001680
001681 ACCCCCATGG GGCCCAGAAC AGAGACATCC TGAACCTCAC CCAGACCACA CACTTAGTAG GTGCTCAGAA GATGTACCTG 001760
001761 GAGAGACAAC AACCCTATCC AACAACAGCT TTCCCAGTGA TGAAATCCAG AGATGGCTTG TATATGTGTG TGTTGGTGTA 001840
001841 AACATATGTA AACTAAGCAT ATAAAATATC AGCAGGAGAC ACAAATGAAA
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Predicted Small Protein

Name ENST00000594299.1_smProtein_1112:1396
Length 95
Molecular weight 10335.9514
Aromaticity 0.0531914893617
Instability index 78.4308510638
Isoelectric point 10.8473510742
Runs 11
Runs residual 0.0117946345976
Runs probability 0.0401149812915
Amino acid sequence MLICWGSRNKLPHTEWLKLQKCIISQLRRPEVQVPGVNRVVPSKGGEGEPVPGLPLSSRW
VSARRFITPVSTSSSHDVLPASVPTFPLSARTPI
Secondary structure LEEEELLLLLLLLHHHHHHHHHHHHHLLLLLEELLLLEEEELLLLLLLLLLLLLLLLLEE
EEEEEEEEELLLLLLLLLLLLLLLLLLLLLLLLL
PRMN -
PiMo -