ENST00000601888.1
Revision as of 18:48, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000601888.1 |
Source |
Gencode19 |
Same with |
NONHSAT013650 |
Classification |
intergenic |
Length |
781 nt |
Genomic location |
chr10+:67375491..67430594 |
Exon number |
2 |
Exons |
67375491..67375519,67429843..67430594 |
Genome context |
|
Sequence |
000001 GGCACTACAA GTGACATGCC ACTGGGCAGG ATTTTTATTT CATTTGCAAT GAATGAAGAA GCACAGCTCT GAAAGACTGA 000080
000081 ATTCCCAGCA CTGGGTGTCA GCTCTACCAA ATGCGGTACA GATTGCAATC TGACCACAGA ATCTCACCAC AAAGAATGCC 000160 000161 GGGGTCTCCT CTGATTATAG CTACTGGCTA TAAGTTCTAA CTAGGGTTTA ATGCAAATTT TCCCTGTAGT CTGCTTGGGG 000240 000241 AGTTGGCCTC ATTCTTGAAT TTTTCTCAGA AAGTTATTGC CAAAAATGTG AGTTCTCACC GCAGTGAAAG AGGAAATCCA 000320 000321 GCTATGAGCA TATATAATAC AGGAGAAAGA ATGCAGAGAA AACACATTCT TTTCTTGCTA CTCAGTTGCC AGAGAAGTAT 000400 000401 ATCTATAATA TTTTCAGTTG TGATGCTATG TCCCATTGAA TTCAACCACA CATTGGAAAA ATCAGTTTAC CCTAGAATCT 000480 000481 AGTTATTGTT GTGGTACAGT TTAATTTTTG TCAAATAATT CTTTCTAAAA TTTCTAATGT AAGTCTTTAA TTTTCAAGAT 000560 000561 ATTTTGCTTA GAAGATGATA TGGTTTGGCT GTGTCCCCAC CCAAATCTCA CCTTGAATTC CCAGGTGTTG TAGGGGGCAG 000640 000641 GTCTTTCCTG TGCTGTTCTT GTGAAAGTGA GTAAGTCTCA TGAGATCTGA AGGCTTTGAA AAACAGGAAT CTCCCTGTAC 000720 000721 AAGCTCTCTC TTTGCCTGCT GCCATCCATG TAAGACGTGA CTTGCTCCTT CTTGTCTTCT G |
Predicted Small Protein
Name | ENST00000601888.1_smProtein_323:481 |
Length | 53 |
Molecular weight | 6157.3236 |
Aromaticity | 0.0961538461538 |
Instability index | 47.6923076923 |
Isoelectric point | 9.30010986328 |
Runs | 5 |
Runs residual | 0.0542155584528 |
Runs probability | 0.0281045751634 |
Amino acid sequence | MSIYNTGERMQRKHILFLLLSCQRSISIIFSVVMLCPIEFNHTLEKSVYPRI |
Secondary structure | LLLLLLHHHHHHHHHHHHHHHHLLLEEEEEEEEEELLLLLLLLLLLLLLLLL |
PRMN | LLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTooooooooooooooo |