Difference between revisions of "LINC01705"
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Revision as of 02:53, 26 December 2018
LINC01705, long intergenic non-protein coding RNA 1705 serves an important role in the carcinogenesis of gastric cancer.
Contents
Annotated Information
Name
LINC01705:long intergenic non-protein coding RNA 1705 (HGNC:52493)
Alias
RP11-400N13.3 (HGNC:52493)
Characteristics
LINC01705 or RP11-400N13.3 is a long non-protein coding gene that is located at chromosome 1q41.[1]
Function
RP11-400N13.3 may have a role in the progression of gastric cancer. It is predicted to regulate >10 target genes, including collagen type I a 1 (COL1A1), COL1A2, and arachidonate 15-lipoxygenase (ALOX15).[1]
Regulation
Please input information here.
Expression
| Experiment | Forward primer | Reverse primer |
|---|---|---|
| RT-qPCR | 5'-GCAGATGGCAAAGGATAAAGC- 3' | 5'-GGTGATATACGATGCAACGGTG- 3'[1] |
It is differentially expressed in gastric cancer tissues.[1]
Disease
Gastric cancer [1]
Labs working on this lncRNA
Department of Laboratory Medicine, Shanghai Shuguang Hospital Affiliated with Shanghai University of TCM, Shanghai 200021, P.R. China
References
Sequence
>ENST00000438158.1, Homo sapiens lincRNA LINC01705 cdna
000081 TTGAAATACA CACTACCTGA AGCTGGATAA CTCATGAACT CTGTTGACAA TTATATTCTT TGTCTTTTTA ATTAACTCAT 000160
000161 TTGGAGTTGG TGTCCTGAGG ACCTAAGCCT AAGAATCTTC AAGATGGAAG AGTAGAGTGA ACAATGAATG AGCCAGAGGG 000240
000241 CTCTTGTCCT CTGTGTGCAG CTCTGGGCAG CCAGCAGGTG GATATGGGAC TTGGCCTGCT GGAGGGGCCC TGGCAAGAGG 000320
000321 AGCTGGCAGG AGCAGATGGC AAAGGATAAA GCGCTCCCTT GTTGGTGTCC CCACAGTCCA GGCTGGTGCT GATGCCGTCC 000400
000401 TGCCGTCCTG CATCAGAGCC ACTCATGCCC GTGTGCGCAC TCTTTGTCGG GGTCTGACAC CGTTGCATCG TATATCACCT 000480
000481 GTGTTGTCAT GGTCAGTGCT CAACAAATGC CCCTACTGAT TCAAGTATAT GAGCAAGTCA AATAAAAAAA TAATATGGCC 000560
000561 GG
