Lnc-CALHM3-2:1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

lnc-CALHM3-2:1

Source

LNCipedia2.1

Same with

,

Classification

intronic(S)

Length

4533 nt

Genomic location

chr10-:105401922..105408105

Exon number

2

Exons

105401922..105406000,105407652..105408105

Genome context

Sequence
000001 TTAAACAAGA GCCATGAAAG CAATAGCTCT GGCGCTTAAA GAGAGGCTTG GTGCAGGGAT CTCAAAAGCC AAACATTGGA 000080
000081 GGGCTCCCCT GACCCCCACT GGTATCGGGG TAGGGATTTG CCTGACCCTT TTACTACCCC ATTTCTTCTT GTGTGCACTG 000160
000161 GGGAATCCTG TTTTTCCATA CTCTTTCTTG TCTACCTGGG CCCTTCTCAT CGCCTCACCT GTGTCGTGCC CACCAGCCCG 000240
000241 TGTCCTGGCA TTCTCTGAGT GCTTGCCATG CATCTTTCCT GCGTGGATAT GTGGGTGGGA AGGAAGTCGG GCAGGGATAG 000320
000321 CAAAGAAGTG GCTAGCACGT TGGAGCAGAC CTTAACCAGC TCCTGAAGAT AACAGAATAG GAGATTCTCA TCCCTCCGGG 000400
000401 CTCCAACCCA CCCCTAGGGG ACCCTCTTCT CCTCCCCTCC CCCTGCCTTA ACCAGTGAGA GAACCTAATC CTAGGTCACC 000480
000481 ACAAACCTAG CTGAGGCCCC AGGATGGTTA TCCCAGGACA AGGGGATTTA GGGCTCAAGT TAGACCCATT TGCTGCTTTC 000560
000561 TGGAGACTTA ATATCAGAAA CCGATGAAAC TGATGGGAAA GACAAGAAAG AGATTATTAA AGCACCTCCT ATATGTCAGG 000640
000641 CAGGGAACGA AACACCTTTT TTCTTATAAT TATCACCACT GCCCTGTAAA GTATGGGTAT TGTGATGCCT ATTTTACAGT 000720
000721 TAAGAAGGCC AAGGGCCAGA CGGTTCAGGT CATCCACAGT TCTCCCCTGT ACACTCTGCT GCCTCTTGGT GAATCCACTG 000800
000801 GAGGCTTGTG CCATGGTTGT GGAGCTATTT TTGGTATGCC TCTCTCCCCA CTGTCCTCTG GGAGTTGGGG CAAACAGGTC 000880
000881 TCTGGGGCTG CCCATTCCAG TGCCCTGAGT TGCACCCAGG AGGACTTTGT TTGTGGTCCC TGGATGAGAG GCAGTGCCAC 000960
000961 CAAGATTCCC AGTAGAGGCC TGCAAACAAC CTGTGGGGCT GCCTTGAATG GGCTTGGGAG ATGCTGCTAG TGGCACCCCC 001040
001041 TGCATTCCTC CAGGAATGTC GGCCCGTTCC TGGTGATTAG CCTGTGGGGC CTCCCTGAGC TTTGATCTTC CATTCCTGTA 001120
001121 AGCGGAGAGG CCCAGATGGA AATGGCCGGG TCAGGTATCC AAGCAGACTA CATGAGCTGT CAGGACTGGA AGTATTAGCT 001200
001201 CACTGGATGA TCCTGGGCAA ATTATGCAAC AAGCAACAAA AACCTCTGTG CCTTGGGTCC TTGAAGACAG ATCCTCCTGG 001280
001281 GTAAGCTAGA GATGCTTGCT GTGGGTCGAA GTCATTTCCC CAAATTGGGG AACTGGAAGA AGGAACATTG CCCAGAGGCT 001360
001361 GAGTCACCGC ACAGGATTCT AGCAGAGCAG AAGTTGCGGG GGCCGGCAGG AAGACAGCTG GAGAGAAGAT GCCCAGTGCT 001440
001441 GATCCCGCAT TGGCCCCAGG AGCTGGGCTT CAGAGAGTCT GAGCTTGTCA GGATGCCAAG ATGAGCAAGA TTCGGCCTAT 001520
001521 GTCCTCAGAG AGCTCTTGGT CTAGCTGGGG GACTGGCCAA CCCAAACCTA AGGTCAAGGT GATGGGGGAG CCTTGAGTTA 001600
001601 GGAGAGCAGA ACGCTGGCTG GCAGGGGAGT CAGGGGAACA TCACAAAGTT AGTGGCTTTG AAGGACGGGG CCTGGGTACT 001680
001681 ACAGCAATGA ATCAAAGACA TCAACACATT TGGGGGCTTC TGAACCCTGC TGCATGTGCA TTCAAAAAGC AAGACGGGGT 001760
001761 ACTTCTCCCA GGCCCCAAGA AAGGCTTCGA ATCCTACTCT GCCACTGAAT AGCCACTCTG TGGCCAGCAT GTGGCCATTC 001840
001841 TGCTCCTCAG TTTCCATATC TGTAACATGA GGATAATATT GGAAACCCAT GTGGCTATTG GGAAAGGCCA GCTGTGAAAG 001920
001921 AAAATTGTCA AGTGGCATAT TCACCCTCCT ATCCTTTTCT CTGATGGACA GGGATGGGCT ACCATCCAGT TTAGGCAGTA 002000
002001 AGTTCTACTG GGGATAGTTA GGAGTCCGTC GGGTTTCTGA AATGGCTTAG AATAGTAACC CCTCTGCCCC CACCAGCCTA 002080
002081 TAGCCTGGAG ACTTTTTTTT TTTTTTTTTT TGAGACTTGG TCTCACTCTG TCGCCCAGGC TAGAGTACAG TGGCATGATC 002160
002161 ACGGCTCATT GCAGCTATGA CCTCCTGGGC TCAAGTGATC CTCCCACCTC AGCCCCCGAG TAGCTGGGAC CACAGGTGCG 002240
002241 TACCACTATG CCCCGCTAAA TTTTTTAAAC TACATTTTTA GTAGAGACAA GGTTTCACCA TGTTTTCCAG GCTGGTCTTG 002320
002321 AACACCTGGA CTCAAACGAT CTGCCCACCT CGGCCTCCCA AAGTGCTGGG ATTACAGGTG TGAGCCACCG CACCTGGCCT 002400
002401 ATCCTTTTCA AAGCATTTTT CTCATCTATT ATCTCAGAGT AACTCTCTAA GGGTAAGTAG GGCAGGTGGC TTTGTTTCCA 002480
002481 TTTTTCAAAG GAAACAGTTG AGACCTCAGA GCTTGCTTGT GGCCAGGCTT GGATTTGAAC CAAGGTTCGG CAGATTCTTT 002560
002561 TTTTTTTTTT TTTTTTTTTT TTGGGATGGA GCCTCGCTCT GTCGCCCAGG CTGGAGTGCA GTGGTGCAAT CTCAGCCCAC 002640
002641 TGCAAGCTCC ATGTCCGTGG TTCACACCAT TCTCTTACCT CAGCCTCCCC AGTAGCTGGG ACTACAGGTG GAGGCCACCA 002720
002721 CGCCCTGCTA ATTTTTTTTT GTATTTTTTA GTAGAGATGG GGTTTCACCC TGTTAGCCAG GATAGTCTCG ATCTCCTGAC 002800
002801 CTCGTGATCC GCCCGCCTCG GCCTCCCAAA GTGCTGGGAT TACAGGCGTG AGCCACCGCG CCTGGCCTGG TCTGCAGATT 002880
002881 CTTTACCCCA AGCTTCACCT GAAGAAGATC AGTGGTTCCC CGAGAGTGGG TCGTGCAAAC ATGTGCTGGG CGGACACAGC 002960
002961 ATTGAGTGGC ATTGAATCTC GTCATGAGAA GTTTCTTTCC TTTCAGTTCT CTTTCACTCC ACATTGGGTC AAGGGGAGAA 003040
003041 TCTCCATTTG GGGCTCCTGT GCTGTTAACA TCTGTCAGAC GCTGGCTGAT GTCATTTGTT TGTTTGACCA AGAGCAAATC 003120
003121 TGACCCAGGC TTAGAATCTT GCTAGAACTT GCCTTGCTCT CTTGTTGAAC TTCATGGCAT TGTTTCATTG TATGTGTTTT 003200
003201 TCCGGAATCT CCCGTCTATA CCTAGGAATG CTGGTTTTCC ATCCACTGTA GCATAGGAAA ATGTCTTTTT GAAATACATG 003280
003281 TTTAAGTTTT AAAAAATAAA GTCAACTTAA ATAAACACAC TAAGATGACA CTAGTGTAGG TGTTACTCAG GTTCATTGGT 003360
003361 TCACCTGGCC GGAGGGCTTG GGGAATGCAG AGTTAAACGA CCCCAAGTGG GACTCTGTCT CTTAGGCACC TAGGGTGCCC 003440
003441 TCTGCCTCTT GTCTCCTAGG GTGACACCAG TGGCTCCCAA ATTCCAACTG GGAAAGGAGC CTGGAAAAGC ATCGGCATTC 003520
003521 GTGGTGGCTG CTCCCCACAC CAAGTAGAAG AATCCACGTT GTCAGAGAGC TGCTAACGTC AGGCGGTACT GGATTTTTGC 003600
003601 AAGCCCTCTA TTTAAAATTC CCCAGAAATT AAATAAGGAG GCTTTGGAGG GAGGAATGCC CTAGACAAAT TGTGGAGTGG 003680
003681 GTTTGTTTTG TTTATGGAGA TGGTCTTTAA AGTCTAAATT GTCCCCGTTT TATTTTTGCC CAATTGAAGA GGGGCTGAAC 003760
003761 TCAGCTGGGA GGGAGGGGAT GGTTGTCAGC CTACAGCTTT TAGTTGAAAC CAAGTCCATT CTGGGGCCAA GAAGCTTCCA 003840
003841 TTTTTAGCAA AGAGAGAAAG GGGAAAAATA TACAAACTCG TACATGTACG CATCTTAGGC ACTGGAGTAA GCCAGTTAAA 003920
003921 TGGATAAGGA TAATCTTTAT ATTTCAAGTG ACCACAGCTC TCTTCTCCAG GCTGCAAATA GATCTATTAA GCACCAGGCA 004000
004001 CATTTCTGGG CACTTTCCAT TCTTTTCTTT TCTTTTCTTT TTCTCCCCAC AACACTGGTA GTAAATACAT GCTGTTTCAT 004080
004081 ATTCCCATCT CACCAATGAG AACTTAAGCC TCATTCTTCA GTCTCTTCCT TCAGCCAATC TGAAGGACCA GGCACCACAC 004160
004161 TAGTCTGACG TTGGCTTCCT AAAGCTGTAG TCCACCCAAC ACCATGATAC AGGGGAGGAT CTTAGGTGGC AGAGAGGCAA 004240
004241 TATCAATCCT TCTGCATCAC ACAGTGGGAA AAGTTTGTCT CATTGCAGTT CTCTTCCAAG CCTTCTGACT TATCTCAGTT 004320
004321 TGATGTTCGA TGATCTTTAA CCCCTGTCTA GCAAATCTGT GTAGCAAAGA AAGAGCGGGC CACAGGCTCA GCCTCTTCAT 004400
004401 TTGTGGCACG GTTCAAATGT ACTACATAGC TTTGTTTTCA TCGTGTGTGC TTTTCTGGTT GGAGCCAGTG GTCCTCGTTG 004480
004481 TTTATTCATG GTGGCAATCT GAAGTTTCCT TAGCAAATTT CTTTCTTGAA GTT
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