Difference between revisions of "Lnc-RALGPS1-2:1"
| Line 42: | Line 42: | ||
sequence = <dnaseq>ACAATAGAAAGGGCCAGGAGGTGCTGAGGCGAGGAGAGGCCGAACTCCAAGGGACGACGCTCGCGGAAGCAGAGGTTTGGGATTCTCACTCTGTTGCCCTCATCTGTCCGGTGCTGCGTTTCTCATAGGTCCTGTGCTCGGTAGTCTTGCATGTTCATCTTTGACTAGAAGCAGCTCTCCTGGGTCGTGTACCCACTAATAATGTGGGTGGAACCACCTAGACTCCCTCCCGCTCTATCTGAGCAATGGTTGGATCTTCTCTTTTAGAACCTGAGCTTGAGGTCTGGCCTCAGGAAGTGGGGAGGGTACAGAAGCAGTAGGAATGTGCCATCTCTTCTTACCAGTCCCACATTTTCCCATCAGTCCACCCAATTACCTGTTCCTGTGCTGTATCTGACCCCCCTGGCAGGGCTTCCCTTGAATTTCCAGCCTTCACCCCCACTTCAAGGCAAGACCCTCTGTGGGTCAGTGTGATTTCCCCTGACTTGTAGTCTTTCTTTGGGCAGGTTCACATGTACTTTTGGTTAATATCTTTCAAGAGATCTAAGTGGCTCCTAAGACATACTTATCCCTCTCTTCTTCAGCCTGTCCTCAGAAGGTCACCCTTTCTCATTAGAAAGCTGGGACAGTGAAAAAAACAAAGAGGGAACCCTCTGCCAAGTCCCACCCTTGCTGCCAGTCCTCACCCCTCCAAATCAAGCCTGGCCAGGCCTTCAGGACACGCCAGGTCATTTCCCTCACATTACGGGAGATGTACAGACTCTCAATGATCTCTTTCAGTTTGTCTACACTTAATCATATGTAGCAGATCTCAGAGTTCTAGCATGGAATTTGGCCACTCTCTTGTTTCAATAAGTTGTCTTTATATATTGAGCTATTTTTTGCTTTTTTCCTAGAGTGCCAAGGAGTTATTATGCAAATGAGTACTTACTCCACTTCTTTCCAAGAAGTTCTTCAACTGCTATATATTTTAAATAGTGAGAAGATAAAGGTAAAATATGTCAGAAGGTTAAGAGGAACATATTTTTTAAAATTAGAAAGTTAGGACTAGAAAAGATAAAAGAAATGAGTAAATAGATTAAAATTAACAGTGAGGAGACAAAATCTGAACAGTTTTAGAAGTCAGAGAATTTGATGAAAGTGCAAAAAAAGAACTCTAAGAGTAACGATGCCAAAAAGATAAAATTAAATGAGAGAAAAGGTTTAAAAAGGCTAGCCTTTCAAATTTTTAATAAAATCTTAAAGTTTAAAGGGCTAGAAAAGAACATGGTAAGATAATTAAATCATCTTAGTATTTAAAGATTAAAAAGCTAAAAAGAATGTAAACAATGTATTCTGTAATATTCCAAATTAAGGATGCATGTATATTTACTGATGTAGAAAGATGTGTAAGACCTCTAGTTTAGAAAGAAAAGCAAGTCACAGAACATTGTATAGTCCAAGCGTATATATTGCATAAAGGTTTGCAGATAGAGAAAAGAATGGTAGGAAGCCAAACTACTGAAGTGGTAGGGAGCTACTGAAGAGGAAAGGGAGTGGGGTGGGGGGTGTCATGGACATCGTCAGCCAGTCCCCTTAGGTGCCCTCAGGTCCCTTTACCGTTTCTGTGCTCTTTTTCCCATCCTGAGTGCCATGCACCGCCAGCCCTCACAATGGTAACTCGCAGGTGAACTGCCTTTGCACCCTTGCACCCCACATGTGTAGACAGCTTGAAGGATTCACTTGGGCCTTTACATCACCCCATCCTCACTCCCACCCTGTGGCCCTCAGCCAGTAACTGAGGCTGCAGGAAATGGAAGCCTCGCCCCTTGTCTCAGGTGGGGACAACTCTGAGATGTCAGTTGCCTTGAGCAGCAGTGTCCAAAATATAAAGCAACCTACATATGTGACTTTACATTTTCTAGTAGCCACATTAAAATTCATTTTAATAAGGGGCTAGGCATGGCATTCATGCTTGTAATCCCAACACTTTGGGAAGTCGAGGTGGGAGGATCACTTGAGCTGAGGAGTTTCAGACCACTGTGGGCAACATAGGGAGACCCATGTCTATACAAATAATGTTTTAAAAAATTAGCCAGATGTGATGGTGCACACCTGTGGTCCCAGCTACTCAGGAGGTTGAGGCAGGAGTATCTCCTGAGTCTGGGAAGTCAAAGCTATAGTGAGTTATGATTGTGCCACTGCACTCCATCCTGGGTGGCAGAGTGAGACCCTGTCTCAAAAAAATTTTTTTTAATTAAAATCATTCTAACAGTGTATTTATATCATTCAACATGTAATCAGTGTGAAAAACTATTAATGAGATGTTTTGAATTCATTTTTATTTGTACTAAGTCTTCAAAACCCAGTGTGTAACACACTTCACTTGGGATGTCCCTATTTCAGTTGCTCAGTAGTGGCTAGTGGCTACCCAGTCGGACAGCTCAGCGTCAGTCACATGGAAGCTGTTCCTCCGCAGGGCTCTGCCTGAAACTGAAGTCTCACTGGGTTTCTTCTCGTTCCCTGTCCTGCTTCCTCCACTCCCTCATCGGTATCTTGAGAGCACTGCTTAATAAATCTTTTGCATACAAGTATTATCTTTGTAATTAAAATAAATCTGGGAGGTTCAAAAGAAAAAAAAAAGAAAA</dnaseq>| | sequence = <dnaseq>ACAATAGAAAGGGCCAGGAGGTGCTGAGGCGAGGAGAGGCCGAACTCCAAGGGACGACGCTCGCGGAAGCAGAGGTTTGGGATTCTCACTCTGTTGCCCTCATCTGTCCGGTGCTGCGTTTCTCATAGGTCCTGTGCTCGGTAGTCTTGCATGTTCATCTTTGACTAGAAGCAGCTCTCCTGGGTCGTGTACCCACTAATAATGTGGGTGGAACCACCTAGACTCCCTCCCGCTCTATCTGAGCAATGGTTGGATCTTCTCTTTTAGAACCTGAGCTTGAGGTCTGGCCTCAGGAAGTGGGGAGGGTACAGAAGCAGTAGGAATGTGCCATCTCTTCTTACCAGTCCCACATTTTCCCATCAGTCCACCCAATTACCTGTTCCTGTGCTGTATCTGACCCCCCTGGCAGGGCTTCCCTTGAATTTCCAGCCTTCACCCCCACTTCAAGGCAAGACCCTCTGTGGGTCAGTGTGATTTCCCCTGACTTGTAGTCTTTCTTTGGGCAGGTTCACATGTACTTTTGGTTAATATCTTTCAAGAGATCTAAGTGGCTCCTAAGACATACTTATCCCTCTCTTCTTCAGCCTGTCCTCAGAAGGTCACCCTTTCTCATTAGAAAGCTGGGACAGTGAAAAAAACAAAGAGGGAACCCTCTGCCAAGTCCCACCCTTGCTGCCAGTCCTCACCCCTCCAAATCAAGCCTGGCCAGGCCTTCAGGACACGCCAGGTCATTTCCCTCACATTACGGGAGATGTACAGACTCTCAATGATCTCTTTCAGTTTGTCTACACTTAATCATATGTAGCAGATCTCAGAGTTCTAGCATGGAATTTGGCCACTCTCTTGTTTCAATAAGTTGTCTTTATATATTGAGCTATTTTTTGCTTTTTTCCTAGAGTGCCAAGGAGTTATTATGCAAATGAGTACTTACTCCACTTCTTTCCAAGAAGTTCTTCAACTGCTATATATTTTAAATAGTGAGAAGATAAAGGTAAAATATGTCAGAAGGTTAAGAGGAACATATTTTTTAAAATTAGAAAGTTAGGACTAGAAAAGATAAAAGAAATGAGTAAATAGATTAAAATTAACAGTGAGGAGACAAAATCTGAACAGTTTTAGAAGTCAGAGAATTTGATGAAAGTGCAAAAAAAGAACTCTAAGAGTAACGATGCCAAAAAGATAAAATTAAATGAGAGAAAAGGTTTAAAAAGGCTAGCCTTTCAAATTTTTAATAAAATCTTAAAGTTTAAAGGGCTAGAAAAGAACATGGTAAGATAATTAAATCATCTTAGTATTTAAAGATTAAAAAGCTAAAAAGAATGTAAACAATGTATTCTGTAATATTCCAAATTAAGGATGCATGTATATTTACTGATGTAGAAAGATGTGTAAGACCTCTAGTTTAGAAAGAAAAGCAAGTCACAGAACATTGTATAGTCCAAGCGTATATATTGCATAAAGGTTTGCAGATAGAGAAAAGAATGGTAGGAAGCCAAACTACTGAAGTGGTAGGGAGCTACTGAAGAGGAAAGGGAGTGGGGTGGGGGGTGTCATGGACATCGTCAGCCAGTCCCCTTAGGTGCCCTCAGGTCCCTTTACCGTTTCTGTGCTCTTTTTCCCATCCTGAGTGCCATGCACCGCCAGCCCTCACAATGGTAACTCGCAGGTGAACTGCCTTTGCACCCTTGCACCCCACATGTGTAGACAGCTTGAAGGATTCACTTGGGCCTTTACATCACCCCATCCTCACTCCCACCCTGTGGCCCTCAGCCAGTAACTGAGGCTGCAGGAAATGGAAGCCTCGCCCCTTGTCTCAGGTGGGGACAACTCTGAGATGTCAGTTGCCTTGAGCAGCAGTGTCCAAAATATAAAGCAACCTACATATGTGACTTTACATTTTCTAGTAGCCACATTAAAATTCATTTTAATAAGGGGCTAGGCATGGCATTCATGCTTGTAATCCCAACACTTTGGGAAGTCGAGGTGGGAGGATCACTTGAGCTGAGGAGTTTCAGACCACTGTGGGCAACATAGGGAGACCCATGTCTATACAAATAATGTTTTAAAAAATTAGCCAGATGTGATGGTGCACACCTGTGGTCCCAGCTACTCAGGAGGTTGAGGCAGGAGTATCTCCTGAGTCTGGGAAGTCAAAGCTATAGTGAGTTATGATTGTGCCACTGCACTCCATCCTGGGTGGCAGAGTGAGACCCTGTCTCAAAAAAATTTTTTTTAATTAAAATCATTCTAACAGTGTATTTATATCATTCAACATGTAATCAGTGTGAAAAACTATTAATGAGATGTTTTGAATTCATTTTTATTTGTACTAAGTCTTCAAAACCCAGTGTGTAACACACTTCACTTGGGATGTCCCTATTTCAGTTGCTCAGTAGTGGCTAGTGGCTACCCAGTCGGACAGCTCAGCGTCAGTCACATGGAAGCTGTTCCTCCGCAGGGCTCTGCCTGAAACTGAAGTCTCACTGGGTTTCTTCTCGTTCCCTGTCCTGCTTCCTCCACTCCCTCATCGGTATCTTGAGAGCACTGCTTAATAAATCTTTTGCATACAAGTATTATCTTTGTAATTAAAATAAATCTGGGAGGTTCAAAAGAAAAAAAAAAGAAAA</dnaseq>| | ||
}} | }} | ||
| − | [[Category:Intergenic]][[Category:lnc-RALGPS1-2]] | + | [[Category:Intergenic]][[Category:lnc-RALGPS1-2]][[Category:NONHSAG053469]] |
Revision as of 15:03, 13 October 2014
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Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
| Transcript ID |
lnc-RALGPS1-2:1 |
| Source |
LNCipedia2.1 |
| Same with |
NONHSAT134796 |
| Classification |
intergenic |
| Length |
2627 nt |
| Genomic location |
chr9+:129986890..130003594 |
| Exon number |
3 |
| Exons |
129986890..129986970,129994613..129994630,130001067..130003594 |
| Genome context |
|
| Sequence |
000001 ACAATAGAAA GGGCCAGGAG GTGCTGAGGC GAGGAGAGGC CGAACTCCAA GGGACGACGC TCGCGGAAGC AGAGGTTTGG 000080
000081 GATTCTCACT CTGTTGCCCT CATCTGTCCG GTGCTGCGTT TCTCATAGGT CCTGTGCTCG GTAGTCTTGC ATGTTCATCT 000160 000161 TTGACTAGAA GCAGCTCTCC TGGGTCGTGT ACCCACTAAT AATGTGGGTG GAACCACCTA GACTCCCTCC CGCTCTATCT 000240 000241 GAGCAATGGT TGGATCTTCT CTTTTAGAAC CTGAGCTTGA GGTCTGGCCT CAGGAAGTGG GGAGGGTACA GAAGCAGTAG 000320 000321 GAATGTGCCA TCTCTTCTTA CCAGTCCCAC ATTTTCCCAT CAGTCCACCC AATTACCTGT TCCTGTGCTG TATCTGACCC 000400 000401 CCCTGGCAGG GCTTCCCTTG AATTTCCAGC CTTCACCCCC ACTTCAAGGC AAGACCCTCT GTGGGTCAGT GTGATTTCCC 000480 000481 CTGACTTGTA GTCTTTCTTT GGGCAGGTTC ACATGTACTT TTGGTTAATA TCTTTCAAGA GATCTAAGTG GCTCCTAAGA 000560 000561 CATACTTATC CCTCTCTTCT TCAGCCTGTC CTCAGAAGGT CACCCTTTCT CATTAGAAAG CTGGGACAGT GAAAAAAACA 000640 000641 AAGAGGGAAC CCTCTGCCAA GTCCCACCCT TGCTGCCAGT CCTCACCCCT CCAAATCAAG CCTGGCCAGG CCTTCAGGAC 000720 000721 ACGCCAGGTC ATTTCCCTCA CATTACGGGA GATGTACAGA CTCTCAATGA TCTCTTTCAG TTTGTCTACA CTTAATCATA 000800 000801 TGTAGCAGAT CTCAGAGTTC TAGCATGGAA TTTGGCCACT CTCTTGTTTC AATAAGTTGT CTTTATATAT TGAGCTATTT 000880 000881 TTTGCTTTTT TCCTAGAGTG CCAAGGAGTT ATTATGCAAA TGAGTACTTA CTCCACTTCT TTCCAAGAAG TTCTTCAACT 000960 000961 GCTATATATT TTAAATAGTG AGAAGATAAA GGTAAAATAT GTCAGAAGGT TAAGAGGAAC ATATTTTTTA AAATTAGAAA 001040 001041 GTTAGGACTA GAAAAGATAA AAGAAATGAG TAAATAGATT AAAATTAACA GTGAGGAGAC AAAATCTGAA CAGTTTTAGA 001120 001121 AGTCAGAGAA TTTGATGAAA GTGCAAAAAA AGAACTCTAA GAGTAACGAT GCCAAAAAGA TAAAATTAAA TGAGAGAAAA 001200 001201 GGTTTAAAAA GGCTAGCCTT TCAAATTTTT AATAAAATCT TAAAGTTTAA AGGGCTAGAA AAGAACATGG TAAGATAATT 001280 001281 AAATCATCTT AGTATTTAAA GATTAAAAAG CTAAAAAGAA TGTAAACAAT GTATTCTGTA ATATTCCAAA TTAAGGATGC 001360 001361 ATGTATATTT ACTGATGTAG AAAGATGTGT AAGACCTCTA GTTTAGAAAG AAAAGCAAGT CACAGAACAT TGTATAGTCC 001440 001441 AAGCGTATAT ATTGCATAAA GGTTTGCAGA TAGAGAAAAG AATGGTAGGA AGCCAAACTA CTGAAGTGGT AGGGAGCTAC 001520 001521 TGAAGAGGAA AGGGAGTGGG GTGGGGGGTG TCATGGACAT CGTCAGCCAG TCCCCTTAGG TGCCCTCAGG TCCCTTTACC 001600 001601 GTTTCTGTGC TCTTTTTCCC ATCCTGAGTG CCATGCACCG CCAGCCCTCA CAATGGTAAC TCGCAGGTGA ACTGCCTTTG 001680 001681 CACCCTTGCA CCCCACATGT GTAGACAGCT TGAAGGATTC ACTTGGGCCT TTACATCACC CCATCCTCAC TCCCACCCTG 001760 001761 TGGCCCTCAG CCAGTAACTG AGGCTGCAGG AAATGGAAGC CTCGCCCCTT GTCTCAGGTG GGGACAACTC TGAGATGTCA 001840 001841 GTTGCCTTGA GCAGCAGTGT CCAAAATATA AAGCAACCTA CATATGTGAC TTTACATTTT CTAGTAGCCA CATTAAAATT 001920 001921 CATTTTAATA AGGGGCTAGG CATGGCATTC ATGCTTGTAA TCCCAACACT TTGGGAAGTC GAGGTGGGAG GATCACTTGA 002000 002001 GCTGAGGAGT TTCAGACCAC TGTGGGCAAC ATAGGGAGAC CCATGTCTAT ACAAATAATG TTTTAAAAAA TTAGCCAGAT 002080 002081 GTGATGGTGC ACACCTGTGG TCCCAGCTAC TCAGGAGGTT GAGGCAGGAG TATCTCCTGA GTCTGGGAAG TCAAAGCTAT 002160 002161 AGTGAGTTAT GATTGTGCCA CTGCACTCCA TCCTGGGTGG CAGAGTGAGA CCCTGTCTCA AAAAAATTTT TTTTAATTAA 002240 002241 AATCATTCTA ACAGTGTATT TATATCATTC AACATGTAAT CAGTGTGAAA AACTATTAAT GAGATGTTTT GAATTCATTT 002320 002321 TTATTTGTAC TAAGTCTTCA AAACCCAGTG TGTAACACAC TTCACTTGGG ATGTCCCTAT TTCAGTTGCT CAGTAGTGGC 002400 002401 TAGTGGCTAC CCAGTCGGAC AGCTCAGCGT CAGTCACATG GAAGCTGTTC CTCCGCAGGG CTCTGCCTGA AACTGAAGTC 002480 002481 TCACTGGGTT TCTTCTCGTT CCCTGTCCTG CTTCCTCCAC TCCCTCATCG GTATCTTGAG AGCACTGCTT AATAAATCTT 002560 002561 TTGCATACAA GTATTATCTT TGTAATTAAA ATAAATCTGG GAGGTTCAAA AGAAAAAAAA AAGAAAA |
