Lnc-RP11-210M15.2.1-1:1
Revision as of 15:01, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
lnc-RP11-210M15.2.1-1:1 |
Source |
LNCipedia2.1 |
Same with |
NONHSAT047700 |
Classification |
intergenic |
Length |
7336 nt |
Genomic location |
chr15-:80665712..80696455 |
Exon number |
4 |
Exons |
80665712..80672495,80690286..80690348,80695844..80695927,80696051..80696455 |
Genome context |
|
Sequence |
000001 GACCGCAGGC GCCTCTCCCG CGCTCGCCTA GCCCGGGCTG CCCCCGCACG CCCACGCCCC AGGTGTCCGG GCGCGCTTTA 000080
000081 CCCAGGGGCG CCGTGCCCAG GCCAGGAGGC CAGGGCGGAG CGGGTGAGGG AGAAGCCCAT TTAGATTCAG AGGGAAGCCG 000160 000161 GTCCTGGGAG ACGGCCGCGA GGAACAAAGG CGCCCCAGTG CTGCCCACTT AGCATGCCAG AGCCGCGCTG CTCGGCTCCC 000240 000241 AGGCCGGGGA CACGGCCCGG TGTTAAGCGG AGGGTGCCCG ACCGCGGGAA TTCCTAAGGC CACGCGCACC TCCAAGGCCA 000320 000321 CCGCCGCACA CAGCTTCGGA GTGCACAGTG CACACGCCCA GGCACAGGCA GCCGGCCCGA GAAATTGTGA ATGTCTTGGC 000400 000401 TTTGAGTTTA TCTGCGTATC CTGGCGAAGT TTGGATGCAG AGAACTTGGA GCTGTTGTTT TCTACCAGAC ACTAGGATCC 000480 000481 CTGAGAGAGG TGTCATTCTT TCGCGCTGCA CACACCTTCC TCCACGTGGT GAAGATACAT CGCTCCTGAC AGATCCAAAG 000560 000561 GGAGATATCG ATCCATGGAA GATGGTTGCT CTCGGAAAAT GCTGAGAAGT TTGCAAAAGG AATGGAAGCA GAGTTAACCA 000640 000641 ATGTATCAGG AAGCTTACAC TTTCTCCTTT TAAACTGCTG TGCTGGTCTA TTAAGACATG CCTAATACCC AAAGCTGAGG 000720 000721 GGCAAAAGGG GAGAGAATGA AGTTTATGCG TCTGTGTCAT AGAGAAAAGC TGCCAAAATG TGATTAAGCT TTTTGAGTTA 000800 000801 GAACTTAACA AAATGCCTTT GCTACTGGTT TCCATGGTTG TCCAGTGAAA AGAGTGAATA CATTTATAGG AAACACAAAA 000880 000881 GGTGGTTTCA GAGCTTGGGC AGGATGGAAG ACGTATTTCT TCTACTATTC GCTCCTGTGA GTTTAGTGCC ACAGACCTGC 000960 000961 TCAGGCATCT GGGAGATGCC GGTGGGAGAT GCCAGGGCTG AGCAGGTTTG AATTTCTTCC TAAACAGGGA ATAAAGACCT 001040 001041 TGAGGAAGGA ATATAGATAT TGAGGAAGAC CCAGCTCCTC ACTAATGAGC TTACCTGCTT TTCTTGGGAC AGCTTGCCTT 001120 001121 AAAGTAGACA GTGCTGTCAT GGGCTTCTGG ATCTTAGAAA ATGCTTCTCA TTCTAGGGGA TTTTGGCCAT GGAGACCATC 001200 001201 GCACAGCTCT TCTCCCTTCT CCTCTTGGCT GCCATCCCAG TAAACAGGTC CTTCCCAGAA CCCACAGAGG AGAAAGGCGT 001280 001281 TGGAGAGGTG GTAAAGATCG TTGGCGGGCT AGGTGGCAAT GTTAAGTCCT GAAAAACGCT GTGCGTTGGG GAGTTTCTTA 001360 001361 GAACACTTGT GTTACTACAA AGGAATACTT GAGGCTGGGT AATTTATAAA GAAAGAGGTT ACTTTGGCTT GCAGTTCTGC 001440 001441 AGCCTGTACA AGAAGCAAGG CACCTGCATT TGCTTCTGGT GATGGCTTCA GGCTGCTTCC ACTCATGGTG GAAGAGGAAG 001520 001521 GGGCACCAGT ATGTGCAAAT CACAACAAGG TGAGAGAGAA GGCAGGTGGG GAGATGCCAG GCTCCCTTTT AACAATCAGC 001600 001601 TCTCATGGGC ACTAGTAGAG TGAAAACTCA CTTATTGCTA TGAGGATGGC ACTGAGCCAT TCATGAGGGG GTCCACCCTC 001680 001681 ATGGCCCTAA CACCTCCCTT CAGGCCTCAC CTCCAACATA TGAGTCCTAT CTGTGCCCTT ACTTTTTTGG AGTCAGCATC 001760 001761 TAAAATAGTC ACTGCTTTGC TCCAACTGGT GTCTCCAGTA ACTTGATGGG GACAACCTTC ATCTTCTTCC ACCTGCTCCA 001840 001841 TTCATGAACC ATGTCTCCTT GTCCTGAAAG GACCAAAGGG TTTCAATTTT CTTAAGCTGT GCCTCAGTTT CCTCATCTAT 001920 001921 AAAATGAGCA TAATAGGAGT ACGTACCTTA GTTTAAGAGG ACTAAGTAGT TTATATGTGA CCACATATTA ACTGAACTCA 002000 002001 TTTCATATCT CCAACCACCT ACACAACATC TTTATGTCTA ACAGAATCTT AAGTTTATTG TGGCAGTATG GAAACCTTGA 002080 002081 TTCTCCACTT CCCAAACCTG CTCTTCCCTG ATGGTTCCTC TTACTGGTTA GTGGCACTGT TGTTCACCCA GCTACTCTGG 002160 002161 CCAAAACCTT TGCCTCCTCT CTTTTGCTCA CACCCCACAT CCAATCCCAC AGGAGACTGG ACCTCTTCTC GCCTCTCCTA 002240 002241 TCACAACCCT AGTCCAAGCC AGTAGCCGGT CACCTGGATT GTGCACTGGA CATTTCCACT CTCCCTGCGC CCACCCTTAA 002320 002321 TCCCTTTACT GCTGCCAGAG GGACACTTTG AAATTACTAG CCAGCCCATG AGCCTCTACT TCCAATCTTC TAATGGTCTC 002400 002401 CCACATTTAC AGTAGAATCC ACTGTCCTTA CCAAGGCCAA AACATCCCAC CTATCTGGCC CCTGGCTGCC TCTCCAGCCT 002480 002481 CATCTCCCTC TTCTCTCACC ATTGCTTTTT CTGCCTTAGC CACGCTGGCC TGACTGCCTC CAGCTCAGGG GACACCTTGC 002560 002561 TGTCTCCACA ACCTTGTGCT CCCTGAGCTG GATATCATTC TCCTGATATC TGCGTACTTC ACCCATCTCA CTTCTGGTAC 002640 002641 ATCTCTCACC CCCTGGATAC CTCACCTTAA AATAGTACCA CTGGACCCCC TCTGCCATGT TACACTGCTT TAGTTTTCTC 002720 002721 ATACTTGCTT ATTACTCCTG AAACAGCAAT TTGTAAATTG TCTCTAGCAC CAGACTGTAA GGGCGGTAAG GACAGGGGCT 002800 002801 TTGAGTGTCT TGTTCTCTGC TCTGTCTTCA ACTCCTAGAT GTGTCTCTAA CGTGCAGTAG GTCCTTAGTA AATATTTATA 002880 002881 GAATGCATGA ATGAACCAGT AAGTATAGTG CCTGGCACAT GATTAAGTGT TGAAGAAGTG TTAGTAATTA TTATGGGCAT 002960 002961 TACTCACACT GCCAAACTAC TTCGTGAATT TTCCCAGGGG TAGGGAACTC CTCATCTTCA TATTTTAAAC AGAACATCAC 003040 003041 TTTATTGAGC TAGTACCATA ATGGGAACTT TAACAACCAT TACTTCATTT CATCCACACA TCAGCCTTAT GAATAAGTGT 003120 003121 TACTGTTCCC ACTTTGCACA TGAGAAAAAG AAGGATCAAA ATGTCAAATG ACCACCAACT ACTCCATTCA GGATCACTTA 003200 003201 TACGGTTTGG CTCTGTGTCC CCACCACAGT CTCATCTCAA ATTGTAATCC CCAGGTGTCT TGGGAGGGAC CTGATGGGAG 003280 003281 ATGATTGGAT CATGGGGGCA GTTTTCCCCC ATACTGTTCT CGTGATAGTG AGGGAGTTCT TGTGAGATCT AATGGTTTAA 003360 003361 AAGTGGCAGT TTCTCCTGCG CTGTCCTTCT CCTGTCGCCT TGTGAATAAG GTGCCTTGCT TCACCTTCTG CCATGATTGT 003440 003441 AAGTTTCCTG AGGCCCTCTA GCCATGCAGA ACTGTGAGCC AATTACACCT CTTTTGTTTA TAAATTACCC AGTCTCAGGT 003520 003521 AGTATCTTTA TAGCAGTATG AGAACGGACT AATATATTCA CAAAGCTGGA GGAGGGAGTG CTGTGAGTTA AACCCATCAG 003600 003601 TCCCAAATCC GTTTCTCTTT CAACCACTCC CAGCATTGGT TCCGGGAACC CCAGGCATGG AGCTCTCCTT CCTCAAGATG 003680 003681 CCCATAGCAC CTGCTTTTCG TATTTGATGA ATCTTGCCTT GCACTGTCAT CAGGGGTCTC TCCCTCCGCT CCATGAGTTC 003760 003761 CTTGAGAGCC GAGACCAAAT CTTACTCCCA GAGCACAGGG CTGGGAATAC AGCAGGAGCT CAGAAACATC TTGACTTGGG 003840 003841 CTAGTGTGAG GAGTGGGAGA AAAAAGGGGA GGATTGTGTG TGCATGTAAG AGTGGGTCCT TTGCCTCTTA AAAAAGTATC 003920 003921 TACTGCAGCT TGTGCTGAAT ATGAGTGTTT GGAATCCTCA GTATGATCAG GGAGGGCACT CAGAGAGAAG AGCTGGAATG 004000 004001 ATCTATGTGA GGGTTCCCCA TTCAGTGTCA TCTGGAGCAA ATAGTCTTCC CCAGAGTTTA CAAGTATATG CAAGCCCAGG 004080 004081 GGACACAAGA AGCCAAGGTA GCCAAAGTTC ACCTACCTGC TATGACAGCC CCCTGGGATG AGTCTTCTCC TCATTTAATA 004160 004161 AAATAAATTA GGAGGGCTGG ATATGCCCTA AAATAATGGT TCCATAACTG CAAAGAAGCT GACTGTAACT CTGCCACCTG 004240 004241 TTAGGAACAG GATGTCACTG TCACTGAAAC AGAAGACTGA AAATTAGCCC ATGCTATATA TAAATTAGGA GGGTGGCGGG 004320 004321 GGGGCGGGGA ACTGGGAACA TCTTGTTTTG ACATTCAGCA ATATTTTCAA GGCTCTCTAA AGAAACTTGG AAGAAAAGAA 004400 004401 TGTAAAAGAG TCCAGGACCT AAAGGGAAAT AAGGACCTGA TTTTCAATCA CATTTTGACC TGAAAATGAA ATCAAGGCCT 004480 004481 ATATTGTGAT GACTTGAGTA GCTTGCTGTC CTACAGCTGC ACAATTGAAG TGGTTTCATT GCTGTGAGTA CCTTCTGCCA 004560 004561 CTCACTAGAT TCTGGAATTA ATCCTCTGCC AGGCTAAAAG CAGAAACAGC TACGGATCTA ACACTTCCTA GGAAGAAGTA 004640 004641 TTTAGCAGAA GCAGTGGTGT TCAATGTGGA GGCATTTTAA CACAGGGTTC CGGAAGGTTC ATTTGCATCC TGCACTGACC 004720 004721 CAGCACAGGG TCTGTAGTGG TCACAGTGGT TGAATTCCCA CCATCTATTC CTTACCAAAT AATCAGACTA AGCCAGTGGT 004800 004801 TCTTCATGAG AGGCTATTCC CCTCCCCTAC TAAGGTGACA TTGGCAATAT CTAGCAACGT TTTTAGTTGT CATATCTGGG 004880 004881 GAGGTGCTAC TGGCATCTCA TGGGTAGAAG CCAGGGATGA TGTTTAACAT CCTACAATGC ACAGGAAAGC ACTTCAACAA 004960 004961 AGACTTACCT GCCCCAAAAC GTTAAGAGTG CCGATGTTGA GAAAACTTGG TGGTCTATGG GGTTTGATTT GCCAATGCCT 005040 005041 GCTTTAAGAA TGAGTGTAAG ACTTCATCCC AGCAAACAGT CTTGAAGCAA AGTCTGTTGG AAGCTATTTG AGAAAGGTTC 005120 005121 TCTCATTCTT AAGAAGAACC AGAAGAAACT GTCTCTTTTC TTTTGGCTGT TGCAGTGTTT GAATATGACT TCTGGACCTG 005200 005201 TTGTAGCCAC TTTGAGTCCC TGAAGGGAAT AATTTTGAGA GCAATCCAGC CATATCCAGT AAAGCCGTAG GTGTGCATAA 005280 005281 CTTGCGACCA GCAATTCAGC CCATAGACAT ATGCCCTGGA GAAGTCTTTA CACAAGTGCA CCAGAAGACA AGTACACAAG 005360 005361 TGTTCCTGGC AACATTGTAA TACTGAAAAC TCACCAATAT TTGTTTGTGA ATAGGCAAAT GGATAATTAA ATTGTTACAT 005440 005441 AACTATTAAA AATAAATATT TAGGGCCGGG CGCGGTGGCT CACGCCTGTA ATCCCAGCAC TTTGGGCGGC CGAGGCAGGT 005520 005521 GGATTGCGAG GTCAGGAGAT GAGACCATCC TGGCTAACAC GGTGAAACTC CGTCTCTACT AAAAATACAA AAAATTAGCC 005600 005601 GGGCGTGGTG GCGGGCACCT GTAGTACCAG CTACTCAGGA GGCTGAGGCA GGAGAAAGGC ATGAACCCAG GAGGTGGAGC 005680 005681 GTGCAGTGAG CCGAGATTGG GCCACTGCAC TCCAGCCTGG GCGACAGAGC GAGACTCCGT CTCAAAAATA AAAATTAAAA 005760 005761 TTAAAAATAA ATAAATAAAT AGCAGTGACA GTAAATAAAT TATGCCTGTG GATGCATGTC ACAAATATAA AGTTGAGTGA 005840 005841 AAAGTACAAA TTGAATTTTT CTCCCCCGGG CACGTCTTTG CTGCAAAGGC CCTGGTGGCC GAGACCAAGG CTGGCTGTTT 005920 005921 ACGTGAGGCC AGCCTTGCAG GTGGGGCAGA GAGGAGGAAA TTTTGTTGTA AGAACTGGGA CAAAGTTGGC TTCTGGAACT 006000 006001 CCCAAAGAAA ATATTTTTCT GGCAAGGGGA ATGCAAGGCA AGGCTTCTCT GATGTGTAAC TGATAGCCTC AGAAGGTGTA 006080 006081 AGGTTAAATA ATGATCTCAT CAGTATAACA GGAGCTGGAC AGTATTAATC AGTGGTCCAA TTCAAAATAA AGCCACACTG 006160 006161 CTATAAGCAA AGTAATGAAG GCTTATTGTG ACCTGGGGCT CCTTAATGAC ACAGATTTGA TTCCCACTTA ATGGGCAACT 006240 006241 GAATAATGCA GCTGATAGCA CAGACCAGTG GGGAAGGCAG ACCAGAGGGG TACAGGAGGC TGCCTGGGAT GAGGCATCTA 006320 006321 AAGGCTGTTA TCACATGTCA CATCATCAGA CCTTGAATTT GCTATTAAAC AGCAAATAAG CAAATATGCC ACTTACAGAA 006400 006401 GACCTTTCCA AACTTCAAGG CATCTACTAA AATTATATTT ATCTCTCTTT GATATACCAA TCACGCAACT CTAAACTATT 006480 006481 TATGCAGAAA CTAATCTACA TATTAAATTG TGCCAATAAA TGTTGTCTTC TCTGTTTACA TAAAATGAAT TGCAAGTCAT 006560 006561 TCCCATATGG TTCCTTAAAT CTGTGGCCTA AATATATTTT TTTTAATTTC AGAGAAACTT TTATATCTTG TGATCTTTAT 006640 006641 TCTCAGATAT GTAATTTTTT TTCTCACTGC TTATTTTCCT AATGTAAATT TCTCAGTTAT TATAGTGGGG AATTTTTTTT 006720 006721 AATTGGATAA CCTTTGGGAG CATGATGAGG ATAGAAAAAT GATTGAGTAT TGTACACATT ATCATTAAAT GGATAAACTT 006800 006801 CTAAAATCAG GATTGTGCAT GCTGAAAATA AGTTTAAAAT ATTGCAAATT TAAGTATCTT TTGTCAGAAC ATGAGAAAGT 006880 006881 TGAGGGAAAA ATAGTGGAAA GTTCCTAAAA GGGAAACAAA AAAAACAGCT TACACTATTA GTGATGACTA TTTTCTTTCT 006960 006961 GTTACGATAT CTGAATCTTT AATACCAGTA GAAATTAGGT TCCAAACTAA AATTGTTCAT TATAATTGCT CAGCATCAAG 007040 007041 TAATTTTTAT GTTGGATAAA GACACAACTC AATTGCTCTC TCTGATATCA ATGTGGGGAA CAATCCACTA TGTTTCTCAT 007120 007121 TTGGTGTTAA TATTGTGGCC TCAGATTTCC TCTCATAATT GCTTCAATAA TTACAATCTA TACATAAAAA CTGAAACTCA 007200 007201 TTATTTATGA GCTTGTAGTT CTGTTGTATG TGTACAAGAG CTATTCAAAG AATAGTTGAA AAGGAAAACT ATGAATAAAA 007280 007281 TATTATTCTC ATGAATTTTT GCTGTGTAGC TTTCAAAGAA TGTTCTATGC TTAAGC |