Difference between revisions of "LncRNAWiki:How to contribute"

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(Created page with "{{basic| tID = ENST00000590978.1| same = | location = chr19+:71161-72706| classification = intergenic| sequence = <dnaseq>GTGCACACGGCTCCCATGCGTTGTCTTCCGAGCGTCAGGCCGCCCCTACCCGT...")
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{{basic|
 
{{basic|
tID = ENST00000455607.2|
+
tID = ENST00000590978.1|
location = chr6-:150117711-150119308|
 
 
same = |
 
same = |
classification = antisense(be contained in the intron of NM_005389:chr6+,150117636-150123335)|
+
location = chr19+:71161-72706|
sequence = <dnaseq>TTTTGAGACAGGGTCTCACTTTGTCACCCAGGCTGGAATGCAGTAGTACAAGCATGGCTCACTGCAGCCTCAACCTGTCAGGCTCACGCAATCCAAGCTATCCTCCCACCTCAGCCTCTTGAGTAGCTGGGACTACAAGTGCCTGCCACATCTAATTTTTTGTATTTTTTGTAGAGATGGAGTTTTGCCATGTTGCCCAGGCTGGTCTCGAACTTCTGAGCGCAAGTGATTCATCTGCCTTAGCCTCCCAAAGTGCTGGGGTTACATGCATGAGCCACCATGCCCGGCCATATATCCTACTATTCTTTAAGATTCAGTTCAAGTTCCATCCGTGTGTGATGTCTCCTTGACCACTCACTGCACAATTCTCTCCCTCATATGCATATTTTATTTTCCTTCCAATAGATATCCTGTGTTAATTATATGTTATCATATCGCTAATTTCCCAGTTACATATATGACATATCTCTTCTAGAATACAAGCTTTGTGAGAATATAATGTATGGCAAATACTTTCTCATATCTCCCATACACCAAATACAGCCTTACATATTCTGCTATTTAAAAAACATCAAACTGGCCGGGTGCAGTGGCTCACACCTGTAATCCCAGCACTTTCGGAGGCTGAGGCGGGCAGATCACCCGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGCGGGCGCCTGTTATCCCAGCTACTCGGGAGGCTAAGGCAGGAGAATCACTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCTGAAATTGGGCCACTGCACTCCAGCCTGGGTGACAAGAGCAAAACTCCACCTCAAAAACAAAAAACAAAAAACAAAAAACAAACAAACAAAAAAAACCTGATTATCAGGTCATAAACTCCAGAGGGATTTTCCCAATTCTACTGTTGTCCTAGTTCTTACCTGGATCAAATATGAGCGCCACAAACTGGGGTTTAGTAATTTTCATGTCATTTATACAATTGTTTGCATATGAAAAAAGAAAAGAGTAACAGCTAAATGTAACCAAAATGTATGATATAAAAGTCTAATTATATTTTGAACATCATCTA</dnaseq>|
+
classification = intergenic|
}}
+
sequence = <dnaseq>GTGCACACGGCTCCCATGCGTTGTCTTCCGAGCGTCAGGCCGCCCCTACCCGTGCTTTCTGCTCTGCAGACCCTCTTCCTAGACCTCCGTCCTTTGTCCCATCGCTGCCTTCCCCTCAAGCTCAGGGCCAAGCTGTCCGCCAACCTCGGCTCCTCCGGGCAGCCCTCGCCCGGGGTGCGCCCCGGGGCAGGACCCCCAGCCCACGCCCAGGGCCCGCCCCTGCCCTCCAGCCCTACGCCTTGACCCGCTTTCCTGCGTCTCTCAGCCTACCTGACCTTGTCTTTACCTCTGTGGGCAGCTCCCTTGTGATCTGCTTAGTTCCCACCCCCCTTTAAGAATTCAATAGAGAAGCCAGACGCAAAACTACAGATATCGTATGAGTCCAGTTTTGTGAAGTGCCTAGAATAGTCAAAATTCACAGAGACAGAAGCAGTGGTCGCCAGGAATGGGGAAGCAAGGCGGAGTTGGGCAGCTCGTGTTCAATGGTTTTGTCCGCCTTCCCTGCCTCCTCTTCTGGGGGAGTTAGATCGAGTTGTAACAAGAACATGCCACTGTCTCGCTGGCTGCAGCGTGTGGTCCCCTTACCAGAGTGAGGATGCGAAGAGAAGGTGGCTGTCTGCAAACCAGGAAGAGAGCCCTCACCGGGAACCCGTCCAGCTGCCACCTTGAACTTGGACTTCCAAGCCTCCAGAACTGTGAGGGATAAATGTAT</dnaseq>|
[[Category:Antisense(intronic)]]
 
 
 
{{annotation|
 
tID = ENST00000455607.2|
 
ann = <tab class=wikitable sep=tab head=top>
 
Source Type Begin End ID Classfication
 
HAVANA gene 150117711 150119308 ENSG00000231760.2 antisense
 
HAVANA transcript 150117711 150119308 ENST00000455607.2 antisense
 
HAVANA exon 150119057 150119308 NA NA
 
HAVANA exon 150117711 150118575 NA NA
 
</tab>|
 
}}
 
 
 
{{annotation|
 
tID = ENST00000455607.2|
 
ann = <tab class=wikitable sep=tab head=top>
 
Source Type Begin End ID Classfication
 
HAVANA gene 150117711 150119308 ENSG00000231760.2 antisense
 
HAVANA transcript 150117711 150119308 ENST00000455607.2 antisense
 
HAVANA exon 150119057 150119308 NA NA
 
HAVANA exon 150117711 150118575 NA NA
 
</tab>|
 
 
}}
 
}}
 +
[[Category:Intergenic]]

Revision as of 10:03, 4 June 2014

Basic Information

Transcript ID

ENST00000590978.1

Source

{{{source}}}

Same with

'

Classification

intergenic

Length

{{{length}}}

Genomic location

chr19+:71161-72706

Exon number

{{{number}}}

Exons

{{{exons}}}

Genome context

{{{context}}}

Sequence
000001 GTGCACACGG CTCCCATGCG TTGTCTTCCG AGCGTCAGGC CGCCCCTACC CGTGCTTTCT GCTCTGCAGA CCCTCTTCCT 000080
000081 AGACCTCCGT CCTTTGTCCC ATCGCTGCCT TCCCCTCAAG CTCAGGGCCA AGCTGTCCGC CAACCTCGGC TCCTCCGGGC 000160
000161 AGCCCTCGCC CGGGGTGCGC CCCGGGGCAG GACCCCCAGC CCACGCCCAG GGCCCGCCCC TGCCCTCCAG CCCTACGCCT 000240
000241 TGACCCGCTT TCCTGCGTCT CTCAGCCTAC CTGACCTTGT CTTTACCTCT GTGGGCAGCT CCCTTGTGAT CTGCTTAGTT 000320
000321 CCCACCCCCC TTTAAGAATT CAATAGAGAA GCCAGACGCA AAACTACAGA TATCGTATGA GTCCAGTTTT GTGAAGTGCC 000400
000401 TAGAATAGTC AAAATTCACA GAGACAGAAG CAGTGGTCGC CAGGAATGGG GAAGCAAGGC GGAGTTGGGC AGCTCGTGTT 000480
000481 CAATGGTTTT GTCCGCCTTC CCTGCCTCCT CTTCTGGGGG AGTTAGATCG AGTTGTAACA AGAACATGCC ACTGTCTCGC 000560
000561 TGGCTGCAGC GTGTGGTCCC CTTACCAGAG TGAGGATGCG AAGAGAAGGT GGCTGTCTGC AAACCAGGAA GAGAGCCCTC 000640
000641 ACCGGGAACC CGTCCAGCTG CCACCTTGAA CTTGGACTTC CAAGCCTCCA GAACTGTGAG GGATAAATGT AT
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