Difference between revisions of "LncRNAWiki:How to contribute"

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(Created page with "{{basic| tID = ENST00000455607.2| location = chr6-:150117711-150119308| same = | classification = antisense(be contained in the intron of NM_005389:chr6+,150117636-150123335)|...")
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{{basic|
 
{{basic|
tID = ENST00000440038.2|
+
tID = ENST00000455607.2|
location = chr1+:317720-324873|
+
location = chr6-:150117711-150119308|
 
same = |
 
same = |
classification = intergenic|
+
classification = antisense(be contained in the intron of NM_005389:chr6+,150117636-150123335)|
sequence = <dnaseq>GATCTACCATGAAAGACTTGTGAATCCAGGAAGAGAGACTGACTGGGCAACATGTTATTCAGGGTCTCCCTCTGTTGTCCAAGGCTGGAGTGTAGTAGTGCTATCGCAGCTGACTGCAGCCTCAACCTTCCAGGCTGAAGCGATCCTCCCACCTCAACCTCCCACGTGGCTGAGACTACAGGTGCTTGCCACTATGCCCAACTAACATTTGGAATTTTCGTATACGTGGATTCCAGAGGGGTGACAGCGAAACGTGGGACCATCCAGTTGCAGGAAAACAAGCTTAACACGCCCACTAATTCTACATTATGCTCCTACCTCCCGGCAGCCTCTCCAGGCCCAGAACTTTCTCCAGTCAGCCTCTACAGACCAAGCTCATGACTCACAATGGCCTATTTAGGCCCATACCCTACGTCACGGCAGCCTCCGCAGATGAGGCTACTGCCTCACAACAGCCTCCACAGGCACAGCTCCATCGTTACAATGGCCTCTTTAGACCCAGCTCCTGCCTCCCAGCCTTCTCTCCAGGCCCTGAACTTTCTCAAGTCGACCTCACCAGGCCCAGCTCATGCTTCTTTGCAGCCTCTCCAGGCCCAGCTCCTGCATCTTGGTGGCCCCTCCAGGCCCAGCCTCTGCCTCCCGTCGGCCTCTGCAGTCCCAACGTCTGCCTCACAGCAGATTCTTCACGCCCAGCATCTACCTCACTGTGGACCCCCCAAGCCAAGCTCCCAACCTTTCAGCAGCTT</dnaseq>|
+
sequence = <dnaseq>TTTTGAGACAGGGTCTCACTTTGTCACCCAGGCTGGAATGCAGTAGTACAAGCATGGCTCACTGCAGCCTCAACCTGTCAGGCTCACGCAATCCAAGCTATCCTCCCACCTCAGCCTCTTGAGTAGCTGGGACTACAAGTGCCTGCCACATCTAATTTTTTGTATTTTTTGTAGAGATGGAGTTTTGCCATGTTGCCCAGGCTGGTCTCGAACTTCTGAGCGCAAGTGATTCATCTGCCTTAGCCTCCCAAAGTGCTGGGGTTACATGCATGAGCCACCATGCCCGGCCATATATCCTACTATTCTTTAAGATTCAGTTCAAGTTCCATCCGTGTGTGATGTCTCCTTGACCACTCACTGCACAATTCTCTCCCTCATATGCATATTTTATTTTCCTTCCAATAGATATCCTGTGTTAATTATATGTTATCATATCGCTAATTTCCCAGTTACATATATGACATATCTCTTCTAGAATACAAGCTTTGTGAGAATATAATGTATGGCAAATACTTTCTCATATCTCCCATACACCAAATACAGCCTTACATATTCTGCTATTTAAAAAACATCAAACTGGCCGGGTGCAGTGGCTCACACCTGTAATCCCAGCACTTTCGGAGGCTGAGGCGGGCAGATCACCCGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCTGGGCGTGGTGGCGGGCGCCTGTTATCCCAGCTACTCGGGAGGCTAAGGCAGGAGAATCACTTGAACCCGGGAGGCGGAGGTTGCAGTGAGCTGAAATTGGGCCACTGCACTCCAGCCTGGGTGACAAGAGCAAAACTCCACCTCAAAAACAAAAAACAAAAAACAAAAAACAAACAAACAAAAAAAACCTGATTATCAGGTCATAAACTCCAGAGGGATTTTCCCAATTCTACTGTTGTCCTAGTTCTTACCTGGATCAAATATGAGCGCCACAAACTGGGGTTTAGTAATTTTCATGTCATTTATACAATTGTTTGCATATGAAAAAAGAAAAGAGTAACAGCTAAATGTAACCAAAATGTATGATATAAAAGTCTAATTATATTTTGAACATCATCTA</dnaseq>|
}}
 
 
 
{{annotation|
 
tID = ENST00000440038.2|
 
ann = <tab class=wikitable sep=tab head=top>
 
Source Type Begin End ID Classfication
 
HAVANA gene 317720 453948 ENSG00000237094.4 lincRNA
 
HAVANA transcript 317720 324873 ENST00000440038.2 lincRNA
 
HAVANA exon 317720 317781 NA NA
 
HAVANA exon 322038 322228 NA NA
 
HAVANA exon 324288 324345 NA NA
 
HAVANA exon 324439 324873 NA NA
 
</tab>|
 
 
}}
 
}}
 +
[[Category:Antisense(intronic)]]

Revision as of 10:13, 3 June 2014

Basic Information

Transcript ID

ENST00000455607.2

Source

{{{source}}}

Same with

'

Classification

antisense(be contained in the intron of NM_005389:chr6+,150117636-150123335)

Length

{{{length}}}

Genomic location

chr6-:150117711-150119308

Exon number

{{{number}}}

Exons

{{{exons}}}

Genome context

{{{context}}}

Sequence
000001 TTTTGAGACA GGGTCTCACT TTGTCACCCA GGCTGGAATG CAGTAGTACA AGCATGGCTC ACTGCAGCCT CAACCTGTCA 000080
000081 GGCTCACGCA ATCCAAGCTA TCCTCCCACC TCAGCCTCTT GAGTAGCTGG GACTACAAGT GCCTGCCACA TCTAATTTTT 000160
000161 TGTATTTTTT GTAGAGATGG AGTTTTGCCA TGTTGCCCAG GCTGGTCTCG AACTTCTGAG CGCAAGTGAT TCATCTGCCT 000240
000241 TAGCCTCCCA AAGTGCTGGG GTTACATGCA TGAGCCACCA TGCCCGGCCA TATATCCTAC TATTCTTTAA GATTCAGTTC 000320
000321 AAGTTCCATC CGTGTGTGAT GTCTCCTTGA CCACTCACTG CACAATTCTC TCCCTCATAT GCATATTTTA TTTTCCTTCC 000400
000401 AATAGATATC CTGTGTTAAT TATATGTTAT CATATCGCTA ATTTCCCAGT TACATATATG ACATATCTCT TCTAGAATAC 000480
000481 AAGCTTTGTG AGAATATAAT GTATGGCAAA TACTTTCTCA TATCTCCCAT ACACCAAATA CAGCCTTACA TATTCTGCTA 000560
000561 TTTAAAAAAC ATCAAACTGG CCGGGTGCAG TGGCTCACAC CTGTAATCCC AGCACTTTCG GAGGCTGAGG CGGGCAGATC 000640
000641 ACCCGAGGTC AGGAGTTCGA GACCAGCCTG GCCAACATGG TGAAACCCCG TCTCTACTAA AAATACAAAA ATTAGCTGGG 000720
000721 CGTGGTGGCG GGCGCCTGTT ATCCCAGCTA CTCGGGAGGC TAAGGCAGGA GAATCACTTG AACCCGGGAG GCGGAGGTTG 000800
000801 CAGTGAGCTG AAATTGGGCC ACTGCACTCC AGCCTGGGTG ACAAGAGCAA AACTCCACCT CAAAAACAAA AAACAAAAAA 000880
000881 CAAAAAACAA ACAAACAAAA AAAACCTGAT TATCAGGTCA TAAACTCCAG AGGGATTTTC CCAATTCTAC TGTTGTCCTA 000960
000961 GTTCTTACCT GGATCAAATA TGAGCGCCAC AAACTGGGGT TTAGTAATTT TCATGTCATT TATACAATTG TTTGCATATG 001040
001041 AAAAAAGAAA AGAGTAACAG CTAAATGTAA CCAAAATGTA TGATATAAAA GTCTAATTAT ATTTTGAACA TCATCTA
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