NONHSAT004794

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT004794

Source

NONCODE4.0

Same with

,

Classification

sense

Length

818 nt

Genomic location

chr1+:100889288..100908670

Exon number

3

Exons

100889288..100889857,100905488..100905554,100908490..100908670

Genome context

Sequence
000001 TGATTTTATT GAGTGTCTAG AGAGCAACAC TGGCTTTCCT CAAGAGTAGG CTGAAAATTC AGTAGATACC CCATGGATAT 000080
000081 TGTGCTCACT GTGAGAAGTC TTTCAAAATT TACCAGGCAC TGAAATAACT CACCTCAGGT CTTCGATGAA GGTCAGGGAG 000160
000161 GTGTGCGTTG GTCTTTGGTG AGCACACGGT ATATTATGAG GGTACAACTG TCGCTGCCAT TGTGTCTGTT CAGTGTGCCT 000240
000241 TTGTAAAGAG CCTGGGATGG CCTCTTCATG GATCTGCCCT CTGTCTCTAA GCTTACCCAT GGAGAAGACA AAGGCTGCTG 000320
000321 CGCAGCTTCA TGCTGAAAAG GAAATGTTGG CAAGTTGTTG CTTTGTAAAG ATCAACACTA TCACCGTAAC AGCTGTCACT 000400
000401 CAAAGTGGAG GAAGTGAAAT GCAAATTTGG TGAGTAATTA GTTTTGTGTC ATTCTTGGGT GTTCTAAATG TTACTATTTA 000480
000481 TCTGTCTTAG GTAATCTATT TAAAGAAGAC ACCAGAAGAA GCCTACAGAG CACTCCTGTC TGGCTCAAAC CCCCCCTATC 000560
000561 TTCCATTCAG GGATGCTTCC TTTGGAAATT GCACTTACAA TCTCACCATT CTCGACTGTT TGCAGGGAAT CAGAAAGGGA 000640
000641 TTACAACATG GATTTTTTGA CTTTGAGACA TTTGATGTGG ATGAATATGA ACATTATGAG GTTTGTACAT TTAATTTTTT 000720
000721 TTACAAAACA TAATTTCATG TTGATTAATT TTTTCCCCCT GTCACACTCA TGTATTGCAA ATCGAGTGGG TGCTAAATAA 000800
000801 AAGCATTCTG GAGTTTTC
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Predicted Small Protein

Name NONHSAT004794_smProtein_572:799
Length 76
Molecular weight 8953.599
Aromaticity 0.133333333333
Instability index 44.5066666667
Isoelectric point 8.84283447266
Runs 11
Runs residual 0.0022695035461
Runs probability 0.0761670761672
Amino acid sequence MLPLEIALTISPFSTVCRESERDYNMDFLTLRHLMWMNMNIMRFVHLIFFTKHNFMLINF
FPLSHSCIANRVGAK
Secondary structure LLLLEEEEELLLLLLLLLHHHHHLLLHHHHHHHHHHHHHHHHHHHHHHHHLLLLEEEEEL
LLLLHHHHHLLLLLL
PRMN LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHH
HHLLLLLLLLLLLLL
PiMo ooooooooooooooooooooooooooooooooooooooTTTTTTTTTTTTTTTTTTTTTT
TTiiiiiiiiiiiii