Difference between revisions of "NONHSAT012762"

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==Annotation==
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===Name===
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NONHSAT012762
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===Alias===
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NA
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===Disease===
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Disease: triple-negative breast cancer [http://www.ncbi.nlm.nih.gov/pubmed/26078338 (PMID:26078338)]
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Dysfunction type: expression
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Description: LncRNAs NONHSAT125629 and ENST00000503938 were upregulated and that XRNA250621.1 and NONHSAT012762 were down-regulated in the tumor samples compared with NT samples. These qPCR results are consistent with the microarray data.
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===Function===
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Function Mechanism: NA [http://www.ncbi.nlm.nih.gov/pubmed/26078338 (PMID:26078338)]
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Biological Process: pathogenic process
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Description: NA
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sequence = <dnaseq>ATTTTCACCGCTATGCCTCCTTTCACTCTGGGAGTCTTCCAGAGGTCTTGCACTCGGGAGAGCATGCTCAGGTTTCCCCAGCTCTACAAAATCACCCAGAATGCCAAAGACTTCAACACAAGGATACTGTGTTGACCAGTGGTCATGCCACTGCCTGTTGATTTGTTGAAAATATTGTTTACACGTATGTTCTTGTTACTGATTGTCAGAAAGCTGGTTTTGAGACTGCAGCTTGGACTAAATTCAGTCATCTGGCTGTCTGGGGAAGCATGCTGACCAGTCTGGTGTTCTTTGGCATCTACTCAGCCATCTGGTCCACCATTCTCATTGCCCCAAATATGAGAGGACAGCAACTGTGATCCTGAGCTGTGCACACTTCTGGTTGGGATTATTTCTGGTTTCTACTTCCTGTTTGAAGATGTGGCATGGAGAGTGCCAAGCACATCTGCAAAAAAGACATTGCTGGAGGAGGTGCAAAGAGCTGGAAACCAAGTCTCCAGTCCTGGGAAAAGCAGTGGTATGGAAAAGCAATGGAAAGAG</dnaseq>|
 
sequence = <dnaseq>ATTTTCACCGCTATGCCTCCTTTCACTCTGGGAGTCTTCCAGAGGTCTTGCACTCGGGAGAGCATGCTCAGGTTTCCCCAGCTCTACAAAATCACCCAGAATGCCAAAGACTTCAACACAAGGATACTGTGTTGACCAGTGGTCATGCCACTGCCTGTTGATTTGTTGAAAATATTGTTTACACGTATGTTCTTGTTACTGATTGTCAGAAAGCTGGTTTTGAGACTGCAGCTTGGACTAAATTCAGTCATCTGGCTGTCTGGGGAAGCATGCTGACCAGTCTGGTGTTCTTTGGCATCTACTCAGCCATCTGGTCCACCATTCTCATTGCCCCAAATATGAGAGGACAGCAACTGTGATCCTGAGCTGTGCACACTTCTGGTTGGGATTATTTCTGGTTTCTACTTCCTGTTTGAAGATGTGGCATGGAGAGTGCCAAGCACATCTGCAAAAAAGACATTGCTGGAGGAGGTGCAAAGAGCTGGAAACCAAGTCTCCAGTCCTGGGAAAAGCAGTGGTATGGAAAAGCAATGGAAAGAG</dnaseq>|
 
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[[Category:Intergenic]]
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[[Category:Intergenic]][[Category:NONHSAG005629]][[Category:Transcripts]]

Latest revision as of 03:25, 7 November 2018


Annotation

Name

NONHSAT012762

Alias

NA

Disease

Disease: triple-negative breast cancer (PMID:26078338)

Dysfunction type: expression

Description: LncRNAs NONHSAT125629 and ENST00000503938 were upregulated and that XRNA250621.1 and NONHSAT012762 were down-regulated in the tumor samples compared with NT samples. These qPCR results are consistent with the microarray data.


Function

Function Mechanism: NA (PMID:26078338)

Biological Process: pathogenic process

Description: NA






Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

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You can also add sub-section(s) at will.

Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT012762

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

540 nt

Genomic location

chr10+:37537046..37604729

Exon number

6

Exons

37537046..37537168,37550792..37550853,37551411..37551467,37553458..37553565,37598025..37598108,37604624..37604729

Genome context

Sequence
000001 ATTTTCACCG CTATGCCTCC TTTCACTCTG GGAGTCTTCC AGAGGTCTTG CACTCGGGAG AGCATGCTCA GGTTTCCCCA 000080
000081 GCTCTACAAA ATCACCCAGA ATGCCAAAGA CTTCAACACA AGGATACTGT GTTGACCAGT GGTCATGCCA CTGCCTGTTG 000160
000161 ATTTGTTGAA AATATTGTTT ACACGTATGT TCTTGTTACT GATTGTCAGA AAGCTGGTTT TGAGACTGCA GCTTGGACTA 000240
000241 AATTCAGTCA TCTGGCTGTC TGGGGAAGCA TGCTGACCAG TCTGGTGTTC TTTGGCATCT ACTCAGCCAT CTGGTCCACC 000320
000321 ATTCTCATTG CCCCAAATAT GAGAGGACAG CAACTGTGAT CCTGAGCTGT GCACACTTCT GGTTGGGATT ATTTCTGGTT 000400
000401 TCTACTTCCT GTTTGAAGAT GTGGCATGGA GAGTGCCAAG CACATCTGCA AAAAAGACAT TGCTGGAGGA GGTGCAAAGA 000480
000481 GCTGGAAACC AAGTCTCCAG TCCTGGGAAA AGCAGTGGTA TGGAAAAGCA ATGGAAAGAG
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