NONHSAT015939
Revision as of 12:05, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT015939 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intronic(AS) |
Length |
846 nt |
Genomic location |
chr10-:101548322..101549167 |
Exon number |
1 |
Exons |
101548322..101549167 |
Genome context |
|
Sequence |
000001 ATGAGTGTGA GTCCAGCTTG TCTCCAAAGC CTGCCTTATT CTAAAGCATC CAATTCTAGG GACTCTTTCA CCAATGCCTG 000080
000081 TGACTCGTGG CCCTGATGAA AGTTATCCAT CCTTGCAAAT GACATATGAG GAGGTGTCCC ACTCAGAGGC TCTCTCATCT 000160 000161 TCCTTCCTCC GTGGATCTAT TTATTCAGGA AAGCTCTAAT TCTTCCACTA GTCCCAGAGT AAAACTACAC ATTTCTGCAG 000240 000241 AGAAGAGCAC AGTGAAGAAT GAAGATAAGA TCCAGGAGAA GAAACAGAAG ACCAGAATCA TGTTCTCTCC GGCCCAGCTG 000320 000321 TGTGTAATTA ATGATGGATT TCAGAGACAG AAACACCGCA GCCTCCAGCA GCTGCAAGAA CTTTCCAATA CCCTGAATCT 000400 000401 TAGCTACAAA CAGCATACAA GCTAGTTACA GAGAATGAAA GCTAAGAGGT GGTAGAAAGC CAACTGACCA AAGAATAAGC 000480 000481 AACAATATGA CTCAGGGCTC AGCATCTACA GAATACCCAG GCCTCTACTC TTCCTACCAC CAGGAATGCC TGGGGAACAC 000560 000561 ATCTGGAAAC CTTCCAGTGT GGATCAACCA TTCCCAGAAA AGTCAGACTT GGCACCCAGA AGACTAGAAC AACCAGTCCC 000640 000641 GGAAAAATCG GTTTCATAAC TGTGGGGAGG AATCTTGGTA GTCCTGCATG CAGCTCCAGC GAAATTCTCC TGCCAGTTTT 000720 000721 TGGAAGCTGT CTTGGAAACT GCTGGGGAAA GCTATGATGT AATACAGCAA ACCACTAAGT ATTTCAGTGC TTCACAAATC 000800 000801 ATAGGTTTAT TCCTAAATTA CTCCATGAAC ATGCAGCCTG AAAACG |
Predicted Small Protein
Name | NONHSAT015939_smProtein_125:424 |
Length | 100 |
Molecular weight | 11451.9007 |
Aromaticity | 0.040404040404 |
Instability index | 62.697979798 |
Isoelectric point | 10.0181274414 |
Runs | 15 |
Runs residual | 0.017825311943 |
Runs probability | 0.0477948536772 |
Amino acid sequence | MRRCPTQRLSHLPSSVDLFIQESSNSSTSPRVKLHISAEKSTVKNEDKIQEKKQKTRIMF SPAQLCVINDGFQRQKHRSLQQLQELSNTLNLSYKQHTS |
Secondary structure | LLLLLLLLLLLLLLLLEEEEEELLLLLLLLLEEEEEEEELLLLLLHHHHHHHHLLEEEEE LLLEEEEELLLLHHHHHHHHHHHHHHHHHLLLLEELLLL |
PRMN | - |
PiMo | - |