NONHSAT017337

From LncRNAWiki
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT017337

Source

NONCODE4.0

Same with

,

Classification

sense

Length

646 nt

Genomic location

chr11+:812079..812850

Exon number

2

Exons

812079..812633,812760..812850

Genome context

Sequence
000001 CTGGTGGAAC TTGTTTGGAA GTTGAGCTGT TGGGGCAGCT GTTCTTGTCT TCCATGCATG TGACCACGAC AGGGCCAGCT 000080
000081 CAGCAAACGG GCCAAGCCAT GAACACAGCG TTGTGGCCAG AGATGTGGAT ACTGGGGCAG CACACTCATT CCCTACCTAG 000160
000161 TTATGAACAT GTCTGTCCAG TGGACCTCTG AGGGTGGAGG TGGGGAAATT GGGCAGGCAG GCAGTGTGGG CCTAATTCCT 000240
000241 AGAAGGCAAG TCCCTGGATA GGAAAGGTGG GGAAGAGAAG TCCCCGTTGA GGAGTGGCTC AGGGAGGGAG TGTTCAGGAA 000320
000321 GAACGGGAGA CACTGGCATA TGGTGGGTCC AGATATGTTG GGTGCCATGT GCCATCTCTG GTGCCATCTA ACTTCCCTGT 000400
000401 GGAACAGCCT CCCAGGCTGG GCAGCTGCTC TGGTCTCACC TCTCTGCTTT CTGTAGGTAT TGGCAAGCTT GCCAGTGTAC 000480
000481 CTGCTGGTGG GGCTGTAGCC GTCTCTGCTG CCCCAGGCTC TGCAGCCCCT GCTGCTGGTT CTGCCCCTGC TGCAGCAGAG 000560
000561 GAGAAGAAAG ATGAGAAGAA GGAGGAGTCT GAAGAGTCAG ATGATGACAT GGGATTTGGC CTTTTTGATT AAATTCCTGC 000640
000641 TCCCCT
[back to top]

Predicted Small Protein

Name NONHSAT017337_smProtein_53:190
Length 46
Molecular weight 5015.6386
Aromaticity 0.0666666666667
Instability index 45.6777777778
Isoelectric point 5.58001708984
Runs 9
Runs residual 0.0377525252525
Runs probability 0.0481559991365
Amino acid sequence MHVTTTGPAQQTGQAMNTALWPEMWILGQHTHSLPSYEHVCPVDL
Secondary structure LEELLLLLHHHHHHHHHHHLLHHHHHHLLLLLLLLLLLEEELLLL
PRMN -
PiMo -