Difference between revisions of "NONHSAT031561"

From LncRNAWiki
Jump to: navigation, search
Line 42: Line 42:
 
sequence = <dnaseq>AATGTCTGGGCAGGGGCTGTAAAATTGGAATAGGTCCCCCCCCACTCCTTAATGTGGTGGCAGAGACCCCTGAGGGGAAATGCAGAGGGCCTTGGTTCTCGGCTGGGCTGTGGAGCTGGGCACTCAGGGAGTTTCACATAGCCACGAAGCTGCTTTCTCAGGCTCCTCTGGCAGGGAGCGTCAGGATGAGAATCCAGACCTGACTGCCACCCAGCCCTCTCACTTCGCAGATGCAAAAATCCAGACTCAGAAAGGGAGGTAACTTCTCCAACAGGGCGGGGTCTGAAGCCCAGGGTCCCGACCCCACCAAGCTGGCCCTGCAGGAGCCTCCTGAGAGGTGTCTCGGGAGCAGACCCAGGGGAAGGGGGCACTGTGCACTCTTGCCGGGTAGGCAAAAGTCTGTCTGCTTCTTGGCAGCTGTGTGGCTTCAAAGCCCAGACAGCAGGGACTGAAGACTGAGCAAGCCACCCCTCTCCTGTCCCAGACCCACCTGAACCCACCAAAGCTGGGAAAGGAGGGGTAGTGGAGACTCCAGAAAAACAGGAAAAATTTAAACTCAACCACTAAGTAAAGCATCATTAACTCCTGTTGTGCTGAGCCCACAAACAGCCCCAGCACTCACTGTTCTACTGTCTGTCGCTGTGCATTTGACAACTCTAGGGACCTCATCATATAATCATGAATGGAGTCTCTACGAGGGCAGGGATGTTGGTTGGCTGTATCCTCGGGCTGGAAGAGCACTGGCACGCAGCAGGCACTGAATAGAATTTCTAAATATACAAACGGATGAACCAATGGATGGATGGATGAATGAAGACCCTGTATAGGTCAATGCCTCAAATGTCTGTGCCTGGCCTGGAGTTATGTCCCTCACCCCCACTGTAGACTAACTCCTGGTCCCACCCTACGGCTTTGGAACTGAAGCCACAGGCCTACCATCCCTGAGAGGTAGCGGTGCTCAGCGTGGCAGGACGCCCCACTTGATGGTAGGCTTCTCCCAGATGGCTAACTGCTTCGAGTCTTTCCCCCAGATGTAACATGTCTATGGGAGGATTATGACATGGGTAGATGAGAGTCCCCAGCCATGGAGGTGACAATGTGCCCTGGAGCCTCACAAGGCAGCAGCCACCAGGAAGAGGCATGGAGGCCAGGAAGGTCCTGGAACACCAGAATTTGGCCAACAGAGCCTGAAGCCAGCACATCGTGGAGGGGCAGCAGCCTGGGGGCATTCGGGAGACCTGGAGATGTGGCAGCTGGCCAGGAGCTGGGGTACAACCTTGACAATCACTAACCTCTCACTTCCTCGTCCTGCCAGGCTATTTATAGCCTCCCTCTCTCTGAAAACTCCTTCACCCATTTTTCTGAGCTTAACAAGCTTGGTGAATTGAAATCAGGTGGACCACCTCCCCAACCTCAGCAAGCCTGCTGGGGTGACTGCACTCAGGCCAGGCCTGCTGGCAGCTCCTGCTCCATGACAGGGACCCTTGAGGGCCTGCTGAGAGTCACAGGGTTGGGGTGCCCCCGGGAAGGTGGCATCTAAAGAGAGGGCAGCAGCTGGGCACCCAGGCAGACCTCAGCCAGAGATGCTGGACGATGGTGACCCCAGAAGGGCTCAGCTCACCCCAGGCCTCCTCCCTGCTTCAGGAAAAACAAACAGATTGGGACAGTGGAAAAACAGCTGTACCTTTAAATTATCTGGCCCACAGATATGAAAAACATTTGCATGCTGAAGCTGTTTGCATCTTCGGTTATTTTTAGGGTGAACCCAGTTGCCTCCCCTTGGAACCAGATGAAGCCCCAGAGGCACGTAGTCCTTTTTCCCAGACGGGGGTCCTGGTCCTGTTTCCCTGGGAATAAGGCTTGAGCATGAGCTCTCTGGGACCCAGCCCCCGACCAGAACCACACCGTGCATTCAGGCTTGGGAGGAACTGGAGCACCAGGGAGCCAAGGCTGCAACTTTGAACATTTGCCACTGCTGACATCGTGGCCACCCACCTGGGGCCAGAAAGAGCCCCTCCGCTGCCCCCAGGGCATGGGTGAAGAGACGAACGCTTAGCCTACTACCTCCTCTCATGCCAGGCCCAGCTGATGGGAATATTTTGCTGAGATATTTCTAGCACCAGCAGCAATTAAAGCAGATTTTCTCTTCCACTCCCCTTCCCCAAAACAAGAATAAATCAGTTCTACCAAT</dnaseq>|
 
sequence = <dnaseq>AATGTCTGGGCAGGGGCTGTAAAATTGGAATAGGTCCCCCCCCACTCCTTAATGTGGTGGCAGAGACCCCTGAGGGGAAATGCAGAGGGCCTTGGTTCTCGGCTGGGCTGTGGAGCTGGGCACTCAGGGAGTTTCACATAGCCACGAAGCTGCTTTCTCAGGCTCCTCTGGCAGGGAGCGTCAGGATGAGAATCCAGACCTGACTGCCACCCAGCCCTCTCACTTCGCAGATGCAAAAATCCAGACTCAGAAAGGGAGGTAACTTCTCCAACAGGGCGGGGTCTGAAGCCCAGGGTCCCGACCCCACCAAGCTGGCCCTGCAGGAGCCTCCTGAGAGGTGTCTCGGGAGCAGACCCAGGGGAAGGGGGCACTGTGCACTCTTGCCGGGTAGGCAAAAGTCTGTCTGCTTCTTGGCAGCTGTGTGGCTTCAAAGCCCAGACAGCAGGGACTGAAGACTGAGCAAGCCACCCCTCTCCTGTCCCAGACCCACCTGAACCCACCAAAGCTGGGAAAGGAGGGGTAGTGGAGACTCCAGAAAAACAGGAAAAATTTAAACTCAACCACTAAGTAAAGCATCATTAACTCCTGTTGTGCTGAGCCCACAAACAGCCCCAGCACTCACTGTTCTACTGTCTGTCGCTGTGCATTTGACAACTCTAGGGACCTCATCATATAATCATGAATGGAGTCTCTACGAGGGCAGGGATGTTGGTTGGCTGTATCCTCGGGCTGGAAGAGCACTGGCACGCAGCAGGCACTGAATAGAATTTCTAAATATACAAACGGATGAACCAATGGATGGATGGATGAATGAAGACCCTGTATAGGTCAATGCCTCAAATGTCTGTGCCTGGCCTGGAGTTATGTCCCTCACCCCCACTGTAGACTAACTCCTGGTCCCACCCTACGGCTTTGGAACTGAAGCCACAGGCCTACCATCCCTGAGAGGTAGCGGTGCTCAGCGTGGCAGGACGCCCCACTTGATGGTAGGCTTCTCCCAGATGGCTAACTGCTTCGAGTCTTTCCCCCAGATGTAACATGTCTATGGGAGGATTATGACATGGGTAGATGAGAGTCCCCAGCCATGGAGGTGACAATGTGCCCTGGAGCCTCACAAGGCAGCAGCCACCAGGAAGAGGCATGGAGGCCAGGAAGGTCCTGGAACACCAGAATTTGGCCAACAGAGCCTGAAGCCAGCACATCGTGGAGGGGCAGCAGCCTGGGGGCATTCGGGAGACCTGGAGATGTGGCAGCTGGCCAGGAGCTGGGGTACAACCTTGACAATCACTAACCTCTCACTTCCTCGTCCTGCCAGGCTATTTATAGCCTCCCTCTCTCTGAAAACTCCTTCACCCATTTTTCTGAGCTTAACAAGCTTGGTGAATTGAAATCAGGTGGACCACCTCCCCAACCTCAGCAAGCCTGCTGGGGTGACTGCACTCAGGCCAGGCCTGCTGGCAGCTCCTGCTCCATGACAGGGACCCTTGAGGGCCTGCTGAGAGTCACAGGGTTGGGGTGCCCCCGGGAAGGTGGCATCTAAAGAGAGGGCAGCAGCTGGGCACCCAGGCAGACCTCAGCCAGAGATGCTGGACGATGGTGACCCCAGAAGGGCTCAGCTCACCCCAGGCCTCCTCCCTGCTTCAGGAAAAACAAACAGATTGGGACAGTGGAAAAACAGCTGTACCTTTAAATTATCTGGCCCACAGATATGAAAAACATTTGCATGCTGAAGCTGTTTGCATCTTCGGTTATTTTTAGGGTGAACCCAGTTGCCTCCCCTTGGAACCAGATGAAGCCCCAGAGGCACGTAGTCCTTTTTCCCAGACGGGGGTCCTGGTCCTGTTTCCCTGGGAATAAGGCTTGAGCATGAGCTCTCTGGGACCCAGCCCCCGACCAGAACCACACCGTGCATTCAGGCTTGGGAGGAACTGGAGCACCAGGGAGCCAAGGCTGCAACTTTGAACATTTGCCACTGCTGACATCGTGGCCACCCACCTGGGGCCAGAAAGAGCCCCTCCGCTGCCCCCAGGGCATGGGTGAAGAGACGAACGCTTAGCCTACTACCTCCTCTCATGCCAGGCCCAGCTGATGGGAATATTTTGCTGAGATATTTCTAGCACCAGCAGCAATTAAAGCAGATTTTCTCTTCCACTCCCCTTCCCCAAAACAAGAATAAATCAGTTCTACCAAT</dnaseq>|
 
}}
 
}}
[[Category:Intronic(AS)]][[Category:NONHSAG012597]]
+
[[Category:Intronic(AS)]][[Category:NONHSAG012597]][[Category:Transcripts]]

Revision as of 11:48, 16 October 2014

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT031561

Source

NONCODE4.0

Same with

,

Classification

intronic(AS)

Length

2191 nt

Genomic location

chr12+:123565931..123569291

Exon number

3

Exons

123565931..123566539,123567435..123567506,123567782..123569291

Genome context

Sequence
000001 AATGTCTGGG CAGGGGCTGT AAAATTGGAA TAGGTCCCCC CCCACTCCTT AATGTGGTGG CAGAGACCCC TGAGGGGAAA 000080
000081 TGCAGAGGGC CTTGGTTCTC GGCTGGGCTG TGGAGCTGGG CACTCAGGGA GTTTCACATA GCCACGAAGC TGCTTTCTCA 000160
000161 GGCTCCTCTG GCAGGGAGCG TCAGGATGAG AATCCAGACC TGACTGCCAC CCAGCCCTCT CACTTCGCAG ATGCAAAAAT 000240
000241 CCAGACTCAG AAAGGGAGGT AACTTCTCCA ACAGGGCGGG GTCTGAAGCC CAGGGTCCCG ACCCCACCAA GCTGGCCCTG 000320
000321 CAGGAGCCTC CTGAGAGGTG TCTCGGGAGC AGACCCAGGG GAAGGGGGCA CTGTGCACTC TTGCCGGGTA GGCAAAAGTC 000400
000401 TGTCTGCTTC TTGGCAGCTG TGTGGCTTCA AAGCCCAGAC AGCAGGGACT GAAGACTGAG CAAGCCACCC CTCTCCTGTC 000480
000481 CCAGACCCAC CTGAACCCAC CAAAGCTGGG AAAGGAGGGG TAGTGGAGAC TCCAGAAAAA CAGGAAAAAT TTAAACTCAA 000560
000561 CCACTAAGTA AAGCATCATT AACTCCTGTT GTGCTGAGCC CACAAACAGC CCCAGCACTC ACTGTTCTAC TGTCTGTCGC 000640
000641 TGTGCATTTG ACAACTCTAG GGACCTCATC ATATAATCAT GAATGGAGTC TCTACGAGGG CAGGGATGTT GGTTGGCTGT 000720
000721 ATCCTCGGGC TGGAAGAGCA CTGGCACGCA GCAGGCACTG AATAGAATTT CTAAATATAC AAACGGATGA ACCAATGGAT 000800
000801 GGATGGATGA ATGAAGACCC TGTATAGGTC AATGCCTCAA ATGTCTGTGC CTGGCCTGGA GTTATGTCCC TCACCCCCAC 000880
000881 TGTAGACTAA CTCCTGGTCC CACCCTACGG CTTTGGAACT GAAGCCACAG GCCTACCATC CCTGAGAGGT AGCGGTGCTC 000960
000961 AGCGTGGCAG GACGCCCCAC TTGATGGTAG GCTTCTCCCA GATGGCTAAC TGCTTCGAGT CTTTCCCCCA GATGTAACAT 001040
001041 GTCTATGGGA GGATTATGAC ATGGGTAGAT GAGAGTCCCC AGCCATGGAG GTGACAATGT GCCCTGGAGC CTCACAAGGC 001120
001121 AGCAGCCACC AGGAAGAGGC ATGGAGGCCA GGAAGGTCCT GGAACACCAG AATTTGGCCA ACAGAGCCTG AAGCCAGCAC 001200
001201 ATCGTGGAGG GGCAGCAGCC TGGGGGCATT CGGGAGACCT GGAGATGTGG CAGCTGGCCA GGAGCTGGGG TACAACCTTG 001280
001281 ACAATCACTA ACCTCTCACT TCCTCGTCCT GCCAGGCTAT TTATAGCCTC CCTCTCTCTG AAAACTCCTT CACCCATTTT 001360
001361 TCTGAGCTTA ACAAGCTTGG TGAATTGAAA TCAGGTGGAC CACCTCCCCA ACCTCAGCAA GCCTGCTGGG GTGACTGCAC 001440
001441 TCAGGCCAGG CCTGCTGGCA GCTCCTGCTC CATGACAGGG ACCCTTGAGG GCCTGCTGAG AGTCACAGGG TTGGGGTGCC 001520
001521 CCCGGGAAGG TGGCATCTAA AGAGAGGGCA GCAGCTGGGC ACCCAGGCAG ACCTCAGCCA GAGATGCTGG ACGATGGTGA 001600
001601 CCCCAGAAGG GCTCAGCTCA CCCCAGGCCT CCTCCCTGCT TCAGGAAAAA CAAACAGATT GGGACAGTGG AAAAACAGCT 001680
001681 GTACCTTTAA ATTATCTGGC CCACAGATAT GAAAAACATT TGCATGCTGA AGCTGTTTGC ATCTTCGGTT ATTTTTAGGG 001760
001761 TGAACCCAGT TGCCTCCCCT TGGAACCAGA TGAAGCCCCA GAGGCACGTA GTCCTTTTTC CCAGACGGGG GTCCTGGTCC 001840
001841 TGTTTCCCTG GGAATAAGGC TTGAGCATGA GCTCTCTGGG ACCCAGCCCC CGACCAGAAC CACACCGTGC ATTCAGGCTT 001920
001921 GGGAGGAACT GGAGCACCAG GGAGCCAAGG CTGCAACTTT GAACATTTGC CACTGCTGAC ATCGTGGCCA CCCACCTGGG 002000
002001 GCCAGAAAGA GCCCCTCCGC TGCCCCCAGG GCATGGGTGA AGAGACGAAC GCTTAGCCTA CTACCTCCTC TCATGCCAGG 002080
002081 CCCAGCTGAT GGGAATATTT TGCTGAGATA TTTCTAGCAC CAGCAGCAAT TAAAGCAGAT TTTCTCTTCC ACTCCCCTTC 002160
002161 CCCAAAACAA GAATAAATCA GTTCTACCAA T
[back to top]