NONHSAT093551

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT093551

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3590 nt

Genomic location

chr3+:181722797..181726386

Exon number

1

Exons

181722797..181726386

Genome context

Sequence
000001 GGGTGGAATT TATGGCCCTA GATATGAAGC TTGGAGATGA CTGAAGTGAT AGATGACTCC AAGGATAATC AATAGCCATG 000080
000081 AGAGTTATGG CTTATTGAAA GCTTACTATT TCTTGGGAGA GTGCAATGTT ATCATCTCCT TAAATTCTAC TGCAAGTCGT 000160
000161 CAGGTTTCTG CAGCTGGGAT TTAAGCCCAA TTCTGCCTGA AGCCAAAACT TGTGTTCTCT TTCACTGTTG TCTCCTAAGA 000240
000241 CAATTGGTTG TGAGGTAGAA AAAGAACTGG ATAATCCTCA AAATGGAAAA TTAAAAAGAT GAAACTAAAT TGGGGTCATG 000320
000321 GGTTGAGACA ATACAGTGAG AGACACTGGA ATTGGAAGAA ATGAGGCATG AGGCCAGAGT GGAGCTCCCT TAGGACAATG 000400
000401 CTTTTGGCTT CTGGAGCCTT TATTACAATG AGGCAGCTCA GGACTTACAG TGTTCATCTG AGTGCCGGGA ATCGTACTGT 000480
000481 CATGGTGCTT CTCATGGCTT TTTCATCTTG CTTTGTGTTA TAGGGCTTTG GGTTCACAAG CTCTCTGAAG GAGCTGACTG 000560
000561 TGAAGGCAAG GACTGTGTCT ATGCCTTTTT TAAGGAGACG CACAGTTTGT CTTAACCAAG TGGACACATG AGAGGCACAG 000640
000641 AGAGGGGTGC ACCTCAGTCT ACCCAAGGAT ATGGAGTGGG GGCTTTATGG AGACCTGAGG GGCCCAGGCA CAGAAAAGAG 000720
000721 ACAAAGTGAG GGAACACTTG AGGCAGATGG CAGGGCACAT GCTTAGGGAG GAAAGCTTGG AAAGGCACAG GCAGAGTGTT 000800
000801 TAAGGATGTG CCCAGCATGT AATCTAGAGA AAGCAGTCAG AGGAAATGAG ACTGGAGAGG CAGCTCGAGG CAGGGCATAT 000880
000881 ATGTGAAAGT CACTCGCACC CCCTCTTATC ATATGACTCC AGGCAGTCCT CCAACCCGTC CTCCAACCCA CCCACTCGAG 000960
000961 CTTCCTGCCT TCTGACAGGT TTCCTTATTT CTGAGCCTCT CGTAACAGGC CCAGTATATC CTTCCTTGCT CATGTAAAGA 001040
001041 ATTCCACTCA TCTTTCAAGA CATTTTAAAC AGAAGTCCTG TGAGGCCTGC CTTGAGACAC TCACACTCAA TTTACTTTCT 001120
001121 TCAGAAGTGT CTTTTCTACT TCTCTGTTCT AGCACAGCCA CAATGTTTCA TCTGTTTCCC CTACTATTGT GAGGGCTTCT 001200
001201 TCCACAAGAA GAATTTTGTC TTCTCTTTGC ACCCCCATTA CCAGCACATA GTAAGCGCTC AGCACATTTG ATAATGGAAT 001280
001281 GGCTCTGATT TTACATTCCT GTATTTTTCC GGCAGATAGT GAGTAGTCAG CGGGGACTCA TGCATGACTC TGGGAAAAGT 001360
001361 AGAGGGTAAT TTTTTTATTT GCTTTTCGAG GGCTGATCAG GGCTCCTTAT TTTTATGGCG GCCAGCATCC TGCTCACCCT 001440
001441 GACTCCCTCC AGCTTCTGGT ACCTGCATAT CCAGGCTATG TTAATTTCCC TGCATTTTTC CTCTTTGTCA CTTTTTCTTT 001520
001521 TTTTTCTTCA AAGAGCGTCG CAATCTCTCA GGAGTTTGAT TATATTGCAA GATGAATAGG ATATTTGAAT TATGCTATTT 001600
001601 AAATGAGTCA TCTCAACCCT AGTGTAATTG TTCACCCCCT GTCACACTAA ACGTGACCTA CATTTTTAAA AGAGTGCTTT 001680
001681 TGGCCTGAAT AGAGGATTGC TGAAATTGTT GGGTTCCAGT TCTCAGCAAT TTATCATTTG TTATCACCGA GTGTGTCTTT 001760
001761 TGTTTCACAT CTGGGCAGAT GTGAACTTTT AAAACTGTCT CTCACTAGAC CTATCAAAAG AAGCTGCTTT TATTTGCAAA 001840
001841 AAGAAGGTGA ACTGATTTCC TGGGTGTTTA TGTGTGTGTG GTATGTGGAG GGGCACAGAG GAGCAGCAGA GTTCATTAAA 001920
001921 CAGAAGATGT CTGGTCTTGG CTAAGCAGTT TAAAAACATA TAGGAGTACT TATGCTGAAT TGATTCACAT TTTGGTTCTG 002000
002001 TGGCCTGAAA CTTGCTTGTT TCACCCTTCT TTTTTGAGAG TTTTGGTTGC TCTAAAACTA AGCCTGTATT AATGCTCTTG 002080
002081 AGATGGATCA ACTGGGGAGC CCTGTCATGC CTTACCATTT TTTCATCTTG GAGTCAAGCT GCAGGACAGG ATTCTTATAC 002160
002161 TGCCCAAATG ATTGGAGGCA CATTTCCCTC CATTGTCCAT TTCTTTGACA GGCTGTGAAA CATAACTAAC TCCAAAGCCA 002240
002241 CCTATCAAAG TTCATGAAGG TTTTAGTTAG GAACTGGTGG TTTTGTTGTT ACAGATACTT CAGTTATTCA GACTGTGAAT 002320
002321 TTGAGTCACA GCCTACTAGG CAAGGCCCAT ACTGAGATAC AAAGGAACTG AACTTTCTAA ATTAGAGGTG AGCAGCATTT 002400
002401 CTGAAGTGAT AGATAAGGTC CTTGTACTAC ATTCATTCAG CAGATATTGA TTGTGTGCCC ATGAATCAGG CATATGTGTA 002480
002481 GGGCGTTAAT ACAAAAGAAA CTGGCCCCTA CCCTCAAGAA GTTCACAGTC TAGTGAGGTT GACAGGCATG CAGATGATAA 002560
002561 CATAATGGAG GCATGCAAGA AATGCTGTGG AAAATTAAGA CAGCACAGTC TGCCTGAGGA GAGTGGTCAA CGTTTAATAG 002640
002641 AGGAGGATGT GCTTGTGTTG GAACTTGTAG GATGAGTAAT GGTGAAGGCA AAGGCTACTG TGGCTAGAGT CTAGTGCACG 002720
002721 ATGATGGAGA TGAGGTGGTC AGAACACGAG GGTTCTTGTA TGTCAAAGTA TGCTAGTTTT ACACCATACA TTTATTATTA 002800
002801 TGAATTCAGC TGCGAGGAAC AGAAATCTGC AATTCAACTG GCTTAAACAC TGAGGAAAAT TTATTAGCAC ATGTAATATG 002880
002881 TTCAAAGGCA GTTCCAGGAT GACTGAATTC AGTGGCTCGA CTCTGTCATT AAGGACTTAG GTTCTTTCCA TTTTTTTTGC 002960
002961 TCTGCCATCC TTGGTATGAT GGTTTGCTCT CAGACTTGCT CTTCTCCTGA TCGCAAGGTG ACCAAAGAGG AAGAGAGATT 003040
003041 TGTTTCTTTG TTTTTGAGGT TTGTTGGTGT TTGTTTTGTC TTGATTTGTG TCTTTTCAAT CAGTAAGGAA AATCTTTCCT 003120
003121 AAGGAGCTCT CCTGCCACTC CCATCAGACT CATCCTCATG CCTCAGTGGC CAAAAGTGCA TCACGTGCCC AATCCTAAAC 003200
003201 CATTCACTGG CAAGGGGAAT GCAACCACCA TTACTGGCTC AGACCAATCT TGATTCACTC CCTGGAAGAA CTGTCCCACT 003280
003281 TCTTCTGGAT TATATGGCCC AGGTAGAGGA TACTGGAACA AAATTGGGTT TCCGATAGAG AGTAGGAGAA AGGGAGACAA 003360
003361 TTGATTGCTG AGTTGGCAAC CAACAGCATT TGCTATGGTA GATGATGAGA AACCAGTATA GATAATTGAG CAGGAGTGGC 003440
003441 ATGATCAGTT ATGTTTAAAA AAAGTCCTAT CAGAAATGTA GAGTTGAGCT TAATAGACAG AAAAATTGAG AACACATGGA 003520
003521 ATAGTCTTGT GAGCAGCCAA GGAACTGATC AACACACATG TGGAACTGGA GCTGAAACTT TTCTGGAGTC
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Predicted Small Protein

Name NONHSAT093551_smProtein_845:1036
Length 64
Molecular weight 6922.8123
Aromaticity 0.047619047619
Instability index 69.6746031746
Isoelectric point 6.23236083984
Runs 9
Runs residual 0.00210560414642
Runs probability 0.0129050619247
Amino acid sequence MRLERQLEAGHICESHSHPLLSYDSRQSSNPSSNPPTRASCLLTGFLISEPLVTGPVYPS
LLM
Secondary structure LLHHHHHHLLLEELLLLLLLLLLLLLLLLLLLLLLLLLLEEEELLEEEELLLLLLLLLLL
LLL
PRMN -
PiMo -