Difference between revisions of "NONHSAT124373"
(Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
Please input transcriptomic nomeclature information here.
===Functio...") |
|||
Line 42: | Line 42: | ||
sequence = <dnaseq>CATGTGGCGGTTCTTTATTCTCATAAATGATTTCAAAACATTATGCACTTGGGGGATTTTATAATGAAAAATCGCGGTGTCCTATTAAAGCACAAAGAGGCAAAGCAGAAGCAGCAGACAGGACGTCAAAGAACCAGTGCATGGCTGCGCCGGGCCCCGGGGCTTCCCACACGGGTTACTGTCATCCTTCCGAATCACTGGACTTGAAGCCCAGCATGTTGCTGAGTTTTGCTCCAGAGACAATTGCCATTTGTTATTTAAGTGACAAAGGTAACGCATGCCGGCGGGAAGCAATGCACAAAATGTGAAGCTCATACAGGAAGCTTATTGGAGCCTCACATCTGGAAAGCACTACAGACCGCACCGCAGACCGCACGACAGACCGCACCGCAGACCGCTCTACAGACCGGCACATGCGCAACCCTGCCCGGCTGCTCTCCCTCCCTGCCTGGCTGCTCTCCCTCCCTGCCCAGCTGCTTTCTCTCCCTGCTGTGACCAGGCCATTTTGGTGCATTATCTGTGCTCAGCGCTTTCCTCCTCTATTTGATGACTTTTCCAGGCAGTGGGCCTGGGGGTGAAGTCCCCTTGACCTTTGGGCTCCACCCAGGCACCTGGAGCCCCTGGGCTCTTCCCCTGCAGGGAACTGTTAGCATCCTGCACTTTGCCCTCCTCCCATCCTGCCCACGGGAGATGCAGCGTGAACTCCTA</dnaseq>| | sequence = <dnaseq>CATGTGGCGGTTCTTTATTCTCATAAATGATTTCAAAACATTATGCACTTGGGGGATTTTATAATGAAAAATCGCGGTGTCCTATTAAAGCACAAAGAGGCAAAGCAGAAGCAGCAGACAGGACGTCAAAGAACCAGTGCATGGCTGCGCCGGGCCCCGGGGCTTCCCACACGGGTTACTGTCATCCTTCCGAATCACTGGACTTGAAGCCCAGCATGTTGCTGAGTTTTGCTCCAGAGACAATTGCCATTTGTTATTTAAGTGACAAAGGTAACGCATGCCGGCGGGAAGCAATGCACAAAATGTGAAGCTCATACAGGAAGCTTATTGGAGCCTCACATCTGGAAAGCACTACAGACCGCACCGCAGACCGCACGACAGACCGCACCGCAGACCGCTCTACAGACCGGCACATGCGCAACCCTGCCCGGCTGCTCTCCCTCCCTGCCTGGCTGCTCTCCCTCCCTGCCCAGCTGCTTTCTCTCCCTGCTGTGACCAGGCCATTTTGGTGCATTATCTGTGCTCAGCGCTTTCCTCCTCTATTTGATGACTTTTCCAGGCAGTGGGCCTGGGGGTGAAGTCCCCTTGACCTTTGGGCTCCACCCAGGCACCTGGAGCCCCTGGGCTCTTCCCCTGCAGGGAACTGTTAGCATCCTGCACTTTGCCCTCCTCCCATCCTGCCCACGGGAGATGCAGCGTGAACTCCTA</dnaseq>| | ||
}} | }} | ||
− | [[Category:Intergenic]] | + | [[Category:Intergenic]][[Category:NONHSAG049249]] |
Revision as of 08:46, 13 October 2014
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT124373 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
708 nt |
Genomic location |
chr7+:155207531..155211435 |
Exon number |
3 |
Exons |
155207531..155208062,155208630..155208700,155211091..155211435 |
Genome context |
|
Sequence |
000001 CATGTGGCGG TTCTTTATTC TCATAAATGA TTTCAAAACA TTATGCACTT GGGGGATTTT ATAATGAAAA ATCGCGGTGT 000080
000081 CCTATTAAAG CACAAAGAGG CAAAGCAGAA GCAGCAGACA GGACGTCAAA GAACCAGTGC ATGGCTGCGC CGGGCCCCGG 000160 000161 GGCTTCCCAC ACGGGTTACT GTCATCCTTC CGAATCACTG GACTTGAAGC CCAGCATGTT GCTGAGTTTT GCTCCAGAGA 000240 000241 CAATTGCCAT TTGTTATTTA AGTGACAAAG GTAACGCATG CCGGCGGGAA GCAATGCACA AAATGTGAAG CTCATACAGG 000320 000321 AAGCTTATTG GAGCCTCACA TCTGGAAAGC ACTACAGACC GCACCGCAGA CCGCACGACA GACCGCACCG CAGACCGCTC 000400 000401 TACAGACCGG CACATGCGCA ACCCTGCCCG GCTGCTCTCC CTCCCTGCCT GGCTGCTCTC CCTCCCTGCC CAGCTGCTTT 000480 000481 CTCTCCCTGC TGTGACCAGG CCATTTTGGT GCATTATCTG TGCTCAGCGC TTTCCTCCTC TATTTGATGA CTTTTCCAGG 000560 000561 CAGTGGGCCT GGGGGTGAAG TCCCCTTGAC CTTTGGGCTC CACCCAGGCA CCTGGAGCCC CTGGGCTCTT CCCCTGCAGG 000640 000641 GAACTGTTAG CATCCTGCAC TTTGCCCTCC TCCCATCCTG CCCACGGGAG ATGCAGCGTG AACTCCTA |
Predicted Small Protein
Name | NONHSAT124373_smProtein_26:307 |
Length | 94 |
Molecular weight | 10134.5812 |
Aromaticity | 0.0645161290323 |
Instability index | 57.4592473118 |
Isoelectric point | 9.07781982422 |
Runs | 12 |
Runs residual | 0.00189167662286 |
Runs probability | 0.0369266325149 |
Amino acid sequence | MISKHYALGGFYNEKSRCPIKAQRGKAEAADRTSKNQCMAAPGPGASHTGYCHPSESLDL KPSMLLSFAPETIAICYLSDKGNACRREAMHKM |
Secondary structure | LLLHHHLLLLLLLLLLLLLHHHHLLHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLHHHEEEEEELLLLLHHHHHHHHLL |
PRMN | - |
PiMo | - |