NONHSAT131725

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT131725

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2195 nt

Genomic location

chr9+:70871837..70885811

Exon number

5

Exons

70871837..70871896,70873448..70873485,70874263..70874350,70879384..70879430,70883850..70885811

Genome context

Sequence
000001 GTGCAGTGGC TTCTATGTTT TGGGTTGATG CTGAATTAGG GAGTGATATT TACCTTGATG GTATCATAAC TATTGTGGAT 000080
000081 TCAAAATATG GATTAAAAgt gaaataccac taaaggcaga agagaatgaa atcatcccac ccactgaccc gttcccaatc 000160
000161 tgagcatatg gatagggccc aaagcaCATT TAACAGAAGA GAAACCTGAT GGCCTTATCA ATGAAGCTAC TAGATCCATA 000240
000241 AATGGACTAG GACAAATCTT AGAAACACAA AGATCAAGGT ACTTTAAAAA AGCTATTCCT ATTAATAACA AATCATTTTA 000320
000321 GTTATTAATA ATAAACATTA AGTAATTGAC AAATATGCTT GATTCTGATA TAAGAAAGAT CTAAGTGCAT TTAAAAAGAT 000400
000401 TTGGATCCAA AATGTTGTTT GGAATGCTCT TAATAAGTTA GTTTGGCATA TTTGACTAGT ACATTTGCCT GTCTTCAAAA 000480
000481 CTAAGATTAC AAAGCCATGA TAACACTGTG TAAGTGTTTG CTTAATGAGG AAGAAAAGAC TTCCAAACAC TCGAGAGGGT 000560
000561 AACTCAGTAC AGAAATCTGA AGTATATTGA GGAATCTTAA TTTGAAGTGT TTAAATGGCT TTTTAATATT TAAAAAGCCT 000640
000641 TCTTAGTGTT TTATAGTTGC CAAAAAATAC ATGGAGTCTT TACCTTGAAG TTCCTGACAA ATTCTTTTAT TAAATTTTGA 000720
000721 CTTTCATTTT CTCTAGGTTC TGTTCCTAAA ACATCTGTGA AGTGTATTTC TGTAGATTAA ATTCTGTTTT CCATTGAATG 000800
000801 TTATCTTAAT TTCAGAAAAT TTCTGTGCAG GGTTATTTTA TTAAGCTCAt tttttttttt tttttttttt tttttttttt 000880
000881 tttttttttG GTGAGAAAGG CTCAGCAGCT GATAGACTCA GCAACAGGCA GCCAGGAGCT CTGAGGCTCA CAGCTGGCAG 000960
000961 TCTAGTTCCA CTCAGTCTCT ACTTGAGAAA TTCTTTCTTT GGAAGTACAG CAGAGGCCTT AGGTGAGTGG CTTGTCTGCT 001040
001041 ATGGCAGAGA TTAGAGGTGC TGACAGACTG CCATAAGTAT TAGGCAGTAA CAGCAGCAGC TGCTTATATG CATGTGAACA 001120
001121 GCTGGGGAAT TAATTTGGTA TGCATTCTCA GGAGCCACTC ATCTGCTGGC AGAGGTAGCA GAAGAATGCC CTTAGTGTAA 001200
001201 GTCCTCTACA ACCATACACC AAATGTGCTC CCTGCGTTTC AAATTCCATT GTAGAGAGTC TCTGATAATC TCACTTATAC 001280
001281 CATGAGCCAT TCCTCAGTAT CTGTCCTCTT CCTGTTAGTG TTCTACAATT CCTTTCTCCT TAATTTTTCT CCGCTTTACA 001360
001361 AAATGTCACA CAGACAAGTG CATGATACTT AAACAAGCTT TTAAAAATAA TGCTCATAAA TAGCTTTGGT TCTGTCATAA 001440
001441 TATTCGTATT TATAAACATT TTAAGTCAAT TCTCTTCTTT TATTTTCATT TCAGAAATAT CCATGTCCTG AATAAAAGTT 001520
001521 GTGTCTTGAT TAGTTTATTA TGTAACAATT TAGTGTGTTT GACATTTCTA ACTTTTATTT CTAACATTTG CTTTATTATA 001600
001601 GAACAATAAA CATGCAGTGA TTGATTTTTC TTACTTCAAG TGGATGAGTG AGCAAGTGAC TAAAATCTTC TGTGAATTCT 001680
001681 TCAGTGTATG GTGCTTGCCA ATGCATCTGA GAATCTAGGG ACTTTCTGAA ATAGTACTTC CTTGCTATGA GGACTGAAGT 001760
001761 TGGATTAGAA TCCTTTTCAA TGAAGATCAG ATGTCCTGAG TAGAATTCTT ACTATTGGGT CCTGAATCTT ATATTAAATA 001840
001841 TTCTCTCAAA TTCCTTGAGG CATAGCAACT TGAGCTTACC AGTTTAGAAA CTGGAGATTT Gggctgggca cggtggctca 001920
001921 cgcctgtaat cccagcactt tgggaggcca aggtgggcgg atcacgaggt caggagatgg agaccatcct ggctaacact 002000
002001 gtgaaacccc atctctacta aaaatacaaa aaattagctg aggctggtgg tgggcgcctg tagtcccagc tactcaggag 002080
002081 actgaggcag gagaatggcg tgaacccggg aggcggagct tgcagtgagc tgagatcgca ccactgcact ccagcctggg 002160
002161 tgacagagcg agactctgtc tcaaaaaaaa aaaaa
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Predicted Small Protein

Name NONHSAT131725_smProtein_1409:1510
Length 34
Molecular weight 3732.4062
Aromaticity 0.181818181818
Instability index 63.2242424242
Isoelectric point 3.99884033203
Runs 8
Runs residual 0.0583003952569
Runs probability 0.0666732909379
Amino acid sequence MLINSFGSVIIFVFINILSQFSSFIFISEISMS
Secondary structure LEELLLLEEEEEEEHHHHHHHLLEEEEEEEEEL
PRMN LLHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLL
PiMo i????????????????????????????????