NONHSAT138645

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT138645

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1078 nt

Genomic location

chrX-:133906109..133931217

Exon number

11

Exons

133906109..133906313,133915851..133915947,133919916..133919977,133921502..133921563,133922760..133922861,133923115..133923169,133923253..133923296,133923610..133923666,133927845..133927923,133930138..133930385,133931151..133931217

Genome context

Sequence
000001 GGACGCGGAA GAACTGGCCC AGCGGAGGTT CCCGCTTCTG AAGCGTGGGA GGCGGAAGAG ACTGCAGccc ccgcccccgt 000080
000081 ccccaagcct ccgcccctta gcccccgccc ccAGCTGCCA GTCCCCAGCA GCTCAGTCCT GCAGTGAGAG TCTTGGGAGT 000160
000161 CCATAGCTAA GCACCAGGAG CTGAGCACTG CCCGCTGTGC CTGCCTGCAA GTCTGACATG GCTCAGGAGA AAATGGAGCT 000240
000241 GGACCTTGAG CCTGACACAT CTTATGGGGG AACCCTGAGG AGATCCAGCA GCGCTCCCCT AATCCATGGG CTCAGTGACC 000320
000321 TTTCACAGGT TTTCCAACCT TACACACTTA GAACTCGGAG GAATAGTACA ACAATTATGA GCCGTCACAG CCTGTTGCTG 000400
000401 TCATCCTCAC CTAATCGTAT TCCTAGTAGC AGACTGCATC AGATCAAAAG GGAAGAAGGC CTGGATATGG TGAACAGAGA 000480
000481 AACTGCACAT GAAAGGGAAA TGCAAACGGC AATGCAGATA AGCCAATCAT GGGATGAGAG CTTGAGCCTG AGTGACAGTG 000560
000561 ATTTTGACAA GCCGGAGAAA TTATATTCTC CTAAGAGAAT TGACTTCACT CCAGTTTCTC CAGCACCTTC ACCCACCAGG 000640
000641 GGATTCGGAA AGATGTTCGT GAGCAGCAGT GGATTGCCAC CAAGTCCAGT TCCCAGTCCA AGACGATTTT CAAGGAGAAG 000720
000721 TCAGAGTCCA GTCAAGTGCA TTAGACCCAG TGTTCTTGGT CCTCTTAAAA GAAAAGGTGA AATGGAGACA GAAAGTCAGC 000800
000801 CCAAGAGACT CTTCCAAGGC ACTACCAATA TGTTATCTCC AGATGCCGCG CAACTGTCTG ATCTCAGTTC ATGTTCAGAT 000880
000881 ATTTTGGATG GCAGTAGTAG CAGCAGTGGC TTATCCTCAG ACCCGCTGGC TAAAGGCAGC GCTACCGCAG AGTCTCCAGT 000960
000961 AGCATGCTCC AATTCATGCT CTTCGTTCAT CTTGATGGAT GATCTCTCAC CCAAGTGACT TAACCATTTC TGATTCAACG 001040
001041 TTTTAACTGC TGTTTCCTAC ATAAAATGTT TAGTGGGG
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Predicted Small Protein

Name NONHSAT138645_smProtein_842:961
Length 40
Molecular weight 4438.2915
Aromaticity 0.102564102564
Instability index 88.9564102564
Isoelectric point 10.0523071289
Runs 6
Runs residual 0.0148944193062
Runs probability 0.0415121003357
Amino acid sequence MPRNCLISVHVQIFWMAVVAAVAYPQTRWLKAALPQSLQ
Secondary structure LLLLLEEHHHHHHHHHHHHHHHHLLHHHHHHHHLLLLLL
PRMN LLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLL
PiMo oooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiii