>RbpA-NODE_10_length_184052_cov_34.351439(-)[156575:156893] RNA-polymerase binding protein which confers resistance to rifampin. ATGGCAGATCGTGTTCTACGAGGCAGCCGACTCGGCGCCGTCAGCTACGAAACCGATCGT GACCACGACCTGGCGCCGCGTCGCATGGCCCGTTATCGCACCGAGAACGGCGAAGAGTTC GATGTTCCGTTCGCTCATGACGCCGAGATCCCGGCCAACTGGGCGTGCCGCAACGGCCTG GAGGGCACACTGCTTGATGGCGACGTGCCCGAACCCAAGAAGGTCAAGCCGCCCCGCACA CACTGGGACATGCTCCTGGAACGCCGCAGTGTCGAAGAGCTTGATGAACTGCTCAAAGAG CGCCTGGAGCTGATCAAGG >Erm(41)-NODE_11_length_181598_cov_32.456006(-)[141373:141789] Erm41 confers MLSb phenotype. GTGGATCTGGGCGCAGGACACGGCGCGCTGACGGCACATCTGGTTGCCGCTGGTGCCAGG GTGCTAGCCGTCGAGCTGCATCCGGGGCGGGCTCGACACCTTCGTTCACGGTTTGCCGAG GAAGATGTCCGGATAGCGGAAGCGGACCTGCTCGCCTTCCGGTGGCCGCGACGGCCATTT CGGGTGGTGGCGAGCCCGCCCTACCAAGTCACCAGCGCACTGATACGGAGTCTCTTGACG CCGGAATCCCGGCTGCTGGCTGCCGACCTGGTGCTGCAGCGCGGGGCTGTGCACAAACAT GCGAAGCGAGCACCTGTTCGCCATTGGACGCTACGGGCCGGAATCACATTGCCGCGAAGC GCTTTCCATCATCCACCGCAGGTGGATTCGTCGGTGCTGGTGATCAGGCGGCGCTGA >mtrA-NODE_2_length_403324_cov_38.310786(-)[45864:46541] MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae. ATGAGGCAAAGGATCCTTGTTGTCGACGATGACGCGTCATTGGCGGAGATGCTCACCATC GTGTTGCGCGGGGAGGGCTTCGAGACCGCGGTCGTGAGCGATGGCACCCAGGCGCTCACC GCCGTCCGGGAGCTGCGCCCCGACCTGGTCTTGTTGGACCTCATGCTGCCGGGGATGAAC GGCATCGATGTATGCCGCGTGCTGCGCTCCGACTCCGGAGTGCCGATCGTCATGCTTACC GCCAAGACCGACACCGTGGATGTGGTGTTGGGCCTGGAGTCTGGTGCTGACGACTACATC ATGAAGCCGTTCAAGCCCAAGGAACTCGTGGCCCGCATCCGTGCCCGGCTGCGGCGAAAC GACGACGAGCCCGCCGAACTGCTGAACATCGCGGGTATCGACATCGACGTGCCCGCGCAC AAGGTGACGCGCGAGGGCGAGCAGATCTCGCTGACCCCGCTGGAGTTCGACCTGCTGGTG GCGCTGGCACGCAAACCGCGCCAGGTGTTTACTCGAGATGTGCTGCTCGAACAGGTGTGG GGTTACCGTCACCCGGCCGATACCAGGCTGGTGAACGTCCACGTGCAGCGTCTGCGGGCG AAGGTCGAGAAGGACCCCGAGAATCCGACCGTGGTGTTGACCGTTCGAGGAGTGGGATAT AAGGCCGGACCCCCGTGA >Nocardia_rifampin_resistant_beta-subunit_of_RNA_polymerase_(rpoB2)-NODE_2_length_403324_cov_38.310786(-)[318251:321666] Due to gene duplication the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance. GTACCTGGGGCCCCTAGCCGACTTTCCTTCGCCAAGCTGCGTGAACCGCTTGCGGTTCCC GGCCTGCTCGATGTGCAGACGGAGTCCTTTGAATGGCTGGTTGGATCGCCGCGCTGGCGT GAGGTTGCGACTGCACGCGGTGAGGTGAACCCGACCGGCGGCCTTGAGGAGATCCTCACG GAGCTTTCGCCGATCGAAGACTTCTCCGGCTCGATGTCGCTGTCGTTCAGCGACCCGCGC TTCGACGAGGTCAAGGCGCCCGTCGACGAGTGCAAAGACAAGGACATGACGTACGCGGCC CCGCTGTTCGTCACGGCCGAGTTCATCAACAACAACACCGGTGAGATCAAGAGCCAGACG GTCTTCATGGGTGATTTCCCGATGATGACCGATATGGGCACCTTCATCATCAACGGCACC GAGCGCGTGGTCGTGTCGCAGCTCGTCCGTTCGCCGGGTGTCTACTTCGACGAGAGCATC GACAAGTCGACCGAGAAGACCCTGCATAGCGTCAAGGTCATCCCCGGCCGCGGTGCCTGG CTCGAGTTCGACGTCGACAAGCGCGACACCGTCGGCGTCCGCATCGACCGCAAGCGCCGC CAGCCGGTCACCGTGCTGCTGAAGGCGCTGGGCTGGACCAACGAGCAGATCGTCGAGCGC TTCGGGTTCTCCGAGATCATGATGGGCACCCTGGAGAAGGACAACATCGCCGGTCCCGAC GAGGCGTTGCTGGACATCTACCGCAAGCTGCGCCCGGGCGAGCCGCCGACCAAGGAGTCG GCGCAGGCCCTGCTGGAGAACCTGTTCTTCAAGGAGAAGCGTTACGACCTGGCCCGCGTG GGTCGGTACAAGGTGAACAAGAAGCTGGGCCTGGGCGGCACCAATCCGGCTCAGGTGACC ACCACCACCCTCACCGAGGAAGACGTCGTCGCCACCATCGAGTACCTGGTGCGCCTGCAC GAGGGCCAGACCACGATGACCGCCCCCGGTGGCGTCGAGGTGCCGGTGGATGTGGACGAC ATCGACCACTTCGGTAACCGTCGCCTGCGTACCGTCGGCGAGCTGATTCAGAACCAGATC CGGGTCGGCCTGTCCCGTATGGAGCGCGTCGTGCGTGAGCGCATGACCACGCAGGACGTC GAGGCGATCACCCCGCAGACCCTGATCAACATCCGTCCCGTCGTGGCGGCGATCAAGGAG TTCTTCGGAACCAGCCAGCTGTCGCAGTTCATGGACCAGAACAACCCGCTGTCGGGCCTG ACCCACAAGCGTCGTCTGTCGGCGCTGGGCCCCGGTGGTCTGACCCGTGACCGCGCCGGC CTCGAGGTCCGCGACGTGCACCCCTCGCACTACGGCCGCATGTGCCCGATCGAGACCCCG GAAGGCCCGAACATCGGCCTGATCGGCTCGCTGTCGGTGTACGCGCGGGTCAACCCGTTC GGTTTCATCGAGACGCCTTACCGGAAGGTCTCGGACGGAGTTGTCACCGACGACATCCAC TACCTGACGGCCGACGAAGAGGACCGCCACGTGGTGGCGCAGGCCAACTCGCCCGTGGAC GCCAACGGCCGCTTCACCGAGGAGAAGATCCTGGTTCGCCGCAAGGGCGGCGAGGTGGAG TTCGTGTCGGCGACCGAGGTCGACTACATGGATGTCTCGCCGCGCCAGATGGTGTCGGTC GCGACCGCCATGATCCCGTTCCTCGAGCACGACGACGCCAACCGTGCCCTCATGGGTGCC AACATGCAGCGCCAGGCGGTTCCGCTGGTGCGTAGCGAGGCTCCGCTGGTCGGTACCGGT ATGGAATTGCGTGCCGCCATCGACGCCGGAGACGTCGTCGTCGCGGAGAAGGCCGGTGTC ATCGAAGAGGTGTCTGCCGACTACGTCACCGTGATGGCCGACGACGGCACCCGGCAGAGC TACCGGTTGCGCAAGTTCGCCCGCTCCAACCACGGCACCTGCGCCAACCAGAAGCCCATC GTGGACGAGGGGCAGCGGGTCGAGGCCGGTCAGGTCATCGCCGACGGTCCCTGCACCGAG AACGGCGAAATGGCCCTCGGTAAGAACCTGCTCGTGGCAGTCATGCCGTGGGAAGGCCAC AACTACGAGGACGCCATCATCCTGTCCAACCGTCTGGTGGAAGAGGACGTGCTCACCTCG ATTCACATCGAAGAGCACGAAATCGATGCGCGCGACACCAAGCTGGGCGCCGAGGAGATC ACCCGGGACATCCCGAACGTCTCCGATGAGGTGCTGGCAGATCTCGACGAGCGTGGCATC GTCCGCATCGGCGCCGAGGTCCGCGACGGCGACATCCTCGTCGGCAAGGTCACCCCGAAG GGTGAGACCGAGCTGACCCCCGAGGAGCGCCTGCTGCGTGCCATCTTCGGTGAGAAGGCT CGCGAGGTCCGCGACACCTCCCTGAAGGTGCCGCACGGCGAGTCCGGAAAGGTCATCGGC ATCCGCGTGTTCTCGCGTGATGACGACGACGATCTGCCTGCCGGCGTGAATGAGCTCGTT CGCGTGTACGTGGCGCAGAAGCGCAAGATCTCCGACGGTGACAAGCTGGCCGGACGCCAC GGCAACAAGGGCGTCATCGGCAAGATCCTGCCCGTCGAGGACATGCCGTTCCTGCCCGAT GGCACCCCGGTGGACATCATCCTGAACACCCACGGTGTGCCACGCCGTATGAACATCGGC CAGATCTTGGAAACCCACCTCGGGTGGATTGCCAAGACCGGCTGGAACATCGAGGGTGAG CCCGAGTGGGCGGCCAATCTGCCTGCAGACCTCACCTCTGCGCCGGCCGATACCCGCACG GCCACCCCGGTGTTCGACGGTGCCCGCGAGGAGGAGCTGACCGGACTGCTGTCCTCGACG CTGCCCAACCGGGACGGCGAGGTCATGGTGGATGGTGACGGCAAGGCGCGGTTGTTCGAC GGCCGGAGCGGCGAGCCGTTCCCGTACCCGGTGACCGTCGGTTACATGTACATCCTGAAG CTGCACCACTTGGTCGACGACAAGATCCACGCGCGTTCGACCGGCCCGTACTCGATGATC ACCCAGCAGCCGCTCGGTGGTAAGGCGCAGTTCGGTGGCCAGCGGTTCGGTGAGATGGAG TGCTGGGCCATGCAGGCCTACGGTGCGGCGTACACGCTGCAGGAGCTGTTGACCATCAAG TCCGACGACACCGTCGGTCGCGTGAAGGTCTACGAGGCGATCGTCAAGGGCGAGAACATC CCCGAGCCGGGTATCCCCGAATCGTTCAAGGTTCTGCTCAAGGAACTCCAGTCGCTGTGC CTCAACGTGGAGGTGCTGTCCAAGGACGGCGCCGCCATCGAGATGCGCGACGGCGACGAC GAGGACCTGGAGCGCGCTGCCGCGAACCTGGGAATCAACCTGTCCCGCAATGAATC