strain_accession,species_name,species_id,gene_name,card_accession,mechanism,AMR_gene_ref_strain,card_drug_class,definition,amr_seqid,contig,strand,position,coverage,identity,host,source,source_detail,country,date,MLST,subspecies_id,subspecies_name
GCF_002086115.1,bacteremicum,564198,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_002086115.1_AMRSEG0001,NZ_MVHJ01000001.1,negative,323496-323827,96.23,91.27,,,,,2017/4/11,724.0,,
GCF_002086115.1,bacteremicum,564198,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_002086115.1_AMRSEG0002,NZ_MVHJ01000002.1,positive,205921-209392,99.03,80.99,,,,,2017/4/11,724.0,,
GCF_002086115.1,bacteremicum,564198,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_002086115.1_AMRSEG0003,NZ_MVHJ01000006.1,negative,176743-177429,100.0,85.73,,,,,2017/4/11,724.0,,
GCF_002086115.1,bacteremicum,564198,tap,ARO:3000343,antibiotic efflux,Mycolicibacterium fortuitum,tetracycline antibiotic,"Efflux pump proteins contained within Mycobacterial genomes which confer resistance to a number of different antibiotics including aminoglycosides, and tetracyclines.",GCF_002086115.1_AMRSEG0004,NZ_MVHJ01000016.1,negative,72795-73977,96.18,80.05,,,,,2017/4/11,724.0,,
GCF_002086115.1,bacteremicum,564198,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_002086115.1_AMRSEG0005,NZ_MVHJ01000032.1,negative,25261-26696,94.72,80.31,,,,,2017/4/11,724.0,,