strain_accession,species_name,species_id,gene_name,card_accession,mechanism,AMR_gene_ref_strain,card_drug_class,definition,amr_seqid,contig,strand,position,coverage,identity,host,source,source_detail,country,date,MLST,subspecies_id,subspecies_name
DRR161203,branderi,43348,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,DRR161203_AMRSEG0001,NODE_10_length_239341_cov_18.775036,positive,80006-80321,91.59,89.24,,,,,,725.0,,
DRR161203,branderi,43348,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,DRR161203_AMRSEG0002,NODE_1_length_842379_cov_19.275823,negative,228066-228752,100.0,89.96,,,,,,725.0,,
DRR161203,branderi,43348,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",DRR161203_AMRSEG0003,NODE_1_length_842379_cov_19.275823,negative,542192-545562,96.02,81.48,,,,,,725.0,,
GCF_002086575.1,branderi,43348,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_002086575.1_AMRSEG0001,NZ_MVHM01000001.1,negative,602830-603516,100.0,89.96,,,,,2017/4/11,725.0,,
GCF_002086575.1,branderi,43348,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_002086575.1_AMRSEG0002,NZ_MVHM01000001.1,negative,916956-920326,96.02,81.48,,,,,2017/4/11,725.0,,
GCF_002086575.1,branderi,43348,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_002086575.1_AMRSEG0003,NZ_MVHM01000007.1,positive,80020-80335,91.59,89.24,,,,,2017/4/11,725.0,,