strain_accession,species_name,species_id,gene_name,card_accession,mechanism,AMR_gene_ref_strain,card_drug_class,definition,amr_seqid,contig,strand,position,coverage,identity,host,source,source_detail,country,date,MLST,subspecies_id,subspecies_name
GCF_000266905.1,chubuense,1800,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_000266905.1_AMRSEG0001,NC_018027.1,positive,913063-916449,96.59,81.55,Environment,Environment: urban environment,Environment:Urban environment:creosote-contaminated soil,,2012/6/12,36.0,,
GCF_000266905.1,chubuense,1800,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_000266905.1_AMRSEG0002,NC_018027.1,positive,1395192-1395878,100.0,87.19,Environment,Environment: urban environment,Environment:Urban environment:creosote-contaminated soil,,2012/6/12,36.0,,
GCF_000266905.1,chubuense,1800,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_000266905.1_AMRSEG0003,NC_018027.1,positive,3177761-3178078,92.17,89.94,Environment,Environment: urban environment,Environment:Urban environment:creosote-contaminated soil,,2012/6/12,36.0,,
GCF_000266905.1,chubuense,1800,tap,ARO:3000343,antibiotic efflux,Mycolicibacterium fortuitum,tetracycline antibiotic,"Efflux pump proteins contained within Mycobacterial genomes which confer resistance to a number of different antibiotics including aminoglycosides, and tetracyclines.",GCF_000266905.1_AMRSEG0004,NC_018027.1,positive,4067897-4069098,97.64,82.05,Environment,Environment: urban environment,Environment:Urban environment:creosote-contaminated soil,,2012/6/12,36.0,,
GCF_001044255.1,chubuense,1800,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_001044255.1_AMRSEG0001,NZ_JYNX01000008.1,negative,34353-34684,96.23,89.16,Environment,Environment: urban environment,Environment:Urban environment:Chubu hospital garden soil,Japan,2015/7/1,39.0,,
GCF_001044255.1,chubuense,1800,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_001044255.1_AMRSEG0002,NZ_JYNX01000016.1,negative,3995-4681,100.0,87.19,Environment,Environment: urban environment,Environment:Urban environment:Chubu hospital garden soil,Japan,2015/7/1,39.0,,
GCF_001044255.1,chubuense,1800,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_001044255.1_AMRSEG0003,NZ_JYNX01000018.1,positive,43678-47063,96.68,81.61,Environment,Environment: urban environment,Environment:Urban environment:Chubu hospital garden soil,Japan,2015/7/1,39.0,,
GCF_001044255.1,chubuense,1800,tap,ARO:3000343,antibiotic efflux,Mycolicibacterium fortuitum,tetracycline antibiotic,"Efflux pump proteins contained within Mycobacterial genomes which confer resistance to a number of different antibiotics including aminoglycosides, and tetracyclines.",GCF_001044255.1_AMRSEG0004,NZ_JYNX01000034.1,positive,125942-127140,97.4,81.33,Environment,Environment: urban environment,Environment:Urban environment:Chubu hospital garden soil,Japan,2015/7/1,39.0,,
GCF_002086595.1,chubuense,1800,tap,ARO:3000343,antibiotic efflux,Mycolicibacterium fortuitum,tetracycline antibiotic,"Efflux pump proteins contained within Mycobacterial genomes which confer resistance to a number of different antibiotics including aminoglycosides, and tetracyclines.",GCF_002086595.1_AMRSEG0001,NZ_MVHO01000003.1,positive,55129-56327,97.4,81.33,,,,,2017/4/11,39.0,,
GCF_002086595.1,chubuense,1800,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_002086595.1_AMRSEG0002,NZ_MVHO01000006.1,negative,159011-159342,96.23,89.16,,,,,2017/4/11,39.0,,
GCF_002086595.1,chubuense,1800,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_002086595.1_AMRSEG0003,NZ_MVHO01000016.1,negative,36486-39871,96.68,81.61,,,,,2017/4/11,39.0,,
GCF_002086595.1,chubuense,1800,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_002086595.1_AMRSEG0004,NZ_MVHO01000027.1,negative,3976-4662,100.0,87.19,,,,,2017/4/11,39.0,,
GCF_900453455.1,chubuense,1800,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_900453455.1_AMRSEG0001,NZ_UATB01000009.1,positive,1237711-1238042,96.23,89.16,,,,,2018/6/30,39.0,,
GCF_900453455.1,chubuense,1800,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_900453455.1_AMRSEG0002,NZ_UATB01000015.1,positive,2549832-2553217,96.68,81.61,,,,,2018/6/30,39.0,,
GCF_900453455.1,chubuense,1800,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_900453455.1_AMRSEG0003,NZ_UATB01000015.1,positive,3017258-3017944,100.0,87.19,,,,,2018/6/30,39.0,,
GCF_900453455.1,chubuense,1800,tap,ARO:3000343,antibiotic efflux,Mycolicibacterium fortuitum,tetracycline antibiotic,"Efflux pump proteins contained within Mycobacterial genomes which confer resistance to a number of different antibiotics including aminoglycosides, and tetracyclines.",GCF_900453455.1_AMRSEG0004,NZ_UATB01000016.1,positive,292430-293628,97.4,81.33,,,,,2018/6/30,39.0,,