strain_accession,species_name,species_id,gene_name,card_accession,mechanism,AMR_gene_ref_strain,card_drug_class,definition,amr_seqid,contig,strand,position,coverage,identity,host,source,source_detail,country,date,MLST,subspecies_id,subspecies_name
GCF_000526915.1,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_000526915.1_AMRSEG0001,NZ_JAGZ01000003.1,positive,170058-170389,96.23,89.46,,,,,2014/1/14,255.0,,
GCF_000526915.1,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,GCF_000526915.1_AMRSEG0002,NZ_JAGZ01000003.1,negative,275354-276970,100.0,83.49,,,,,2014/1/14,255.0,,
GCF_000526915.1,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,GCF_000526915.1_AMRSEG0003,NZ_JAGZ01000004.1,negative,116018-116560,99.45,80.18,,,,,2014/1/14,255.0,,
GCF_000526915.1,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_000526915.1_AMRSEG0004,NZ_JAGZ01000009.1,negative,100093-100779,100.0,90.25,,,,,2014/1/14,255.0,,
GCF_000526915.1,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_000526915.1_AMRSEG0005,NZ_JAGZ01000017.1,positive,15569-18955,96.62,81.66,,,,,2014/1/14,255.0,,
SRR5052604,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052604_AMRSEG0004,NODE_29_length_46511_cov_112.478600,positive,39352-40968,100.0,83.49,Animal,Animal: avian,Animal:Avian:Southern wattled jacana:liver,United States of America,2004/2/28,255.0,,
SRR5052604,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052604_AMRSEG0005,NODE_5_length_268021_cov_116.374514,negative,99055-99386,96.23,89.46,Animal,Animal: avian,Animal:Avian:Southern wattled jacana:liver,United States of America,2004/2/28,255.0,,
SRR5052606,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052606_AMRSEG0001,NODE_13_length_116406_cov_159.390509,positive,113458-113789,96.23,89.46,Animal,Animal: avian,Animal:Avian:Great go-away bird:liver,United States of America,2012/6/28,255.0,,
SRR5052606,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052606_AMRSEG0002,NODE_35_length_47205_cov_170.767723,negative,30504-31046,99.45,80.18,Animal,Animal: avian,Animal:Avian:Great go-away bird:liver,United States of America,2012/6/28,255.0,,
SRR5052606,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052606_AMRSEG0003,NODE_36_length_46290_cov_148.317239,positive,39144-40760,100.0,83.49,Animal,Animal: avian,Animal:Avian:Great go-away bird:liver,United States of America,2012/6/28,255.0,,
SRR5052606,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052606_AMRSEG0004,NODE_52_length_28056_cov_178.393241,negative,18975-22361,96.62,81.66,Animal,Animal: avian,Animal:Avian:Great go-away bird:liver,United States of America,2012/6/28,255.0,,
SRR5052606,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052606_AMRSEG0005,NODE_60_length_18033_cov_162.947969,negative,7623-8309,100.0,90.25,Animal,Animal: avian,Animal:Avian:Great go-away bird:liver,United States of America,2012/6/28,255.0,,
SRR5052609,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052609_AMRSEG0001,NODE_11_length_195257_cov_242.749588,positive,94836-95522,100.0,90.25,Animal,Animal: avian,Animal:Avian:Gouldian finch:lung,United States of America,1996/8/23,255.0,,
SRR5052609,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052609_AMRSEG0002,NODE_12_length_178764_cov_238.367021,negative,40570-43956,96.62,81.66,Animal,Animal: avian,Animal:Avian:Gouldian finch:lung,United States of America,1996/8/23,255.0,,
SRR5052609,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052609_AMRSEG0003,NODE_3_length_461968_cov_231.468196,positive,345693-346235,99.45,80.18,Animal,Animal: avian,Animal:Avian:Gouldian finch:lung,United States of America,1996/8/23,255.0,,
SRR5052609,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052609_AMRSEG0004,NODE_6_length_382776_cov_219.845741,positive,107230-108846,100.0,83.49,Animal,Animal: avian,Animal:Avian:Gouldian finch:lung,United States of America,1996/8/23,255.0,,
SRR5052609,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052609_AMRSEG0005,NODE_6_length_382776_cov_219.845741,negative,213810-214141,96.23,89.46,Animal,Animal: avian,Animal:Avian:Gouldian finch:lung,United States of America,1996/8/23,255.0,,
SRR5052610,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052610_AMRSEG0001,NODE_10_length_195258_cov_132.479874,negative,99737-100423,100.0,90.25,Animal,Animal: avian,Animal:Avian:Sulawesi superb fruit dove:kidney,United States of America,2007/9/19,255.0,,
SRR5052610,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052610_AMRSEG0002,NODE_11_length_190797_cov_134.751224,negative,115734-116276,99.45,80.18,Animal,Animal: avian,Animal:Avian:Sulawesi superb fruit dove:kidney,United States of America,2007/9/19,255.0,,
SRR5052610,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052610_AMRSEG0003,NODE_12_length_179906_cov_128.385114,positive,135951-139337,96.62,81.66,Animal,Animal: avian,Animal:Avian:Sulawesi superb fruit dove:kidney,United States of America,2007/9/19,255.0,,
SRR5052610,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052610_AMRSEG0004,NODE_3_length_382776_cov_121.793265,positive,107230-108846,100.0,83.49,Animal,Animal: avian,Animal:Avian:Sulawesi superb fruit dove:kidney,United States of America,2007/9/19,255.0,,
SRR5052610,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052610_AMRSEG0005,NODE_3_length_382776_cov_121.793265,negative,213810-214141,96.23,89.46,Animal,Animal: avian,Animal:Avian:Sulawesi superb fruit dove:kidney,United States of America,2007/9/19,255.0,,
SRR5052612,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052612_AMRSEG0001,NODE_11_length_195258_cov_157.561823,positive,94836-95522,100.0,90.25,Animal,Animal: avian,Animal:Avian:Yellow-breasted fruit dove:intestine,United States of America,2004/3/17,255.0,,
SRR5052612,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052612_AMRSEG0002,NODE_12_length_178764_cov_160.817147,negative,40570-43956,96.62,81.66,Animal,Animal: avian,Animal:Avian:Yellow-breasted fruit dove:intestine,United States of America,2004/3/17,255.0,,
SRR5052612,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052612_AMRSEG0003,NODE_20_length_104212_cov_165.818241,negative,87400-87942,99.45,80.18,Animal,Animal: avian,Animal:Avian:Yellow-breasted fruit dove:intestine,United States of America,2004/3/17,255.0,,
SRR5052612,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052612_AMRSEG0004,NODE_30_length_46547_cov_154.597109,negative,5538-7154,100.0,83.49,Animal,Animal: avian,Animal:Avian:Yellow-breasted fruit dove:intestine,United States of America,2004/3/17,255.0,,
SRR5052612,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052612_AMRSEG0005,NODE_4_length_267958_cov_150.954299,negative,98992-99323,96.23,89.46,Animal,Animal: avian,Animal:Avian:Yellow-breasted fruit dove:intestine,United States of America,2004/3/17,255.0,,
SRR5052613,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052613_AMRSEG0001,NODE_11_length_195258_cov_122.029427,negative,99737-100423,100.0,90.25,Animal,Animal: avian,Animal:Avian:Superb fruit dove:liver,United States of America,2006/4/12,255.0,,
SRR5052613,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052613_AMRSEG0002,NODE_12_length_190895_cov_124.171879,negative,115734-116276,99.45,80.18,Animal,Animal: avian,Animal:Avian:Superb fruit dove:liver,United States of America,2006/4/12,255.0,,
SRR5052613,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052613_AMRSEG0003,NODE_13_length_179906_cov_122.370723,positive,135951-139337,96.62,81.66,Animal,Animal: avian,Animal:Avian:Superb fruit dove:liver,United States of America,2006/4/12,255.0,,
SRR5052613,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052613_AMRSEG0004,NODE_18_length_114403_cov_118.463154,positive,107230-108846,100.0,83.49,Animal,Animal: avian,Animal:Avian:Superb fruit dove:liver,United States of America,2006/4/12,255.0,,
SRR5052613,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052613_AMRSEG0005,NODE_7_length_268107_cov_118.125248,negative,99141-99472,96.23,89.46,Animal,Animal: avian,Animal:Avian:Superb fruit dove:liver,United States of America,2006/4/12,255.0,,
SRR5052614,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052614_AMRSEG0001,NODE_10_length_195258_cov_213.215651,negative,99737-100423,100.0,90.25,Animal,Animal: avian,Animal:Avian:Eastern blue-necked tanager:intestine,United States of America,2008/3/4,255.0,,
SRR5052614,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052614_AMRSEG0002,NODE_11_length_178947_cov_213.709851,negative,40570-43956,96.62,81.66,Animal,Animal: avian,Animal:Avian:Eastern blue-necked tanager:intestine,United States of America,2008/3/4,255.0,,
SRR5052614,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052614_AMRSEG0003,NODE_2_length_464375_cov_212.720563,positive,348100-348642,99.45,80.18,Animal,Animal: avian,Animal:Avian:Eastern blue-necked tanager:intestine,United States of America,2008/3/4,255.0,,
SRR5052614,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052614_AMRSEG0004,NODE_5_length_382776_cov_206.364276,positive,107230-108846,100.0,83.49,Animal,Animal: avian,Animal:Avian:Eastern blue-necked tanager:intestine,United States of America,2008/3/4,255.0,,
SRR5052614,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052614_AMRSEG0005,NODE_5_length_382776_cov_206.364276,negative,213810-214141,96.23,89.46,Animal,Animal: avian,Animal:Avian:Eastern blue-necked tanager:intestine,United States of America,2008/3/4,255.0,,
SRR5052615,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052615_AMRSEG0001,NODE_11_length_195257_cov_205.105377,negative,99736-100422,100.0,90.25,Animal,Animal: avian,Animal:Avian:Golden backed woodpecker:liver,United States of America,2008/7/10,255.0,,
SRR5052615,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052615_AMRSEG0002,NODE_12_length_178764_cov_211.425258,negative,40570-43956,96.62,81.66,Animal,Animal: avian,Animal:Avian:Golden backed woodpecker:liver,United States of America,2008/7/10,255.0,,
SRR5052615,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052615_AMRSEG0003,NODE_2_length_461968_cov_213.515848,negative,115734-116276,99.45,80.18,Animal,Animal: avian,Animal:Avian:Golden backed woodpecker:liver,United States of America,2008/7/10,255.0,,
SRR5052615,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052615_AMRSEG0004,NODE_5_length_382776_cov_185.510051,positive,168636-168967,96.23,89.46,Animal,Animal: avian,Animal:Avian:Golden backed woodpecker:liver,United States of America,2008/7/10,255.0,,
SRR5052615,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052615_AMRSEG0005,NODE_5_length_382776_cov_185.510051,negative,273931-275547,100.0,83.49,Animal,Animal: avian,Animal:Avian:Golden backed woodpecker:liver,United States of America,2008/7/10,255.0,,
SRR5052617,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052617_AMRSEG0001,NODE_12_length_195158_cov_153.624516,negative,99637-100323,100.0,90.25,Animal,Animal: avian,Animal:Avian:Southern wattled jacana:spleen,United States of America,2002/2/11,255.0,,
SRR5052617,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052617_AMRSEG0002,NODE_13_length_178764_cov_150.688759,negative,40570-43956,96.62,81.66,Animal,Animal: avian,Animal:Avian:Southern wattled jacana:spleen,United States of America,2002/2/11,255.0,,
SRR5052617,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052617_AMRSEG0003,NODE_18_length_114399_cov_149.286384,positive,107230-108846,100.0,83.49,Animal,Animal: avian,Animal:Avian:Southern wattled jacana:spleen,United States of America,2002/2/11,255.0,,
SRR5052617,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052617_AMRSEG0004,NODE_1_length_464378_cov_150.224916,positive,348103-348645,99.45,80.18,Animal,Animal: avian,Animal:Avian:Southern wattled jacana:spleen,United States of America,2002/2/11,255.0,,
SRR5052617,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052617_AMRSEG0005,NODE_8_length_268117_cov_145.807278,negative,99151-99482,96.23,89.46,Animal,Animal: avian,Animal:Avian:Southern wattled jacana:spleen,United States of America,2002/2/11,255.0,,
SRR5052618,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052618_AMRSEG0001,NODE_11_length_195257_cov_197.957176,positive,94836-95522,100.0,90.25,Animal,Animal: avian,Animal:Avian:Wompoo fruit dove:liver,United States of America,2012/7/7,255.0,,
SRR5052618,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052618_AMRSEG0002,NODE_12_length_178764_cov_191.465968,positive,134809-138195,96.62,81.66,Animal,Animal: avian,Animal:Avian:Wompoo fruit dove:liver,United States of America,2012/7/7,255.0,,
SRR5052618,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052618_AMRSEG0003,NODE_2_length_461968_cov_187.460683,negative,115734-116276,99.45,80.18,Animal,Animal: avian,Animal:Avian:Wompoo fruit dove:liver,United States of America,2012/7/7,255.0,,
SRR5052618,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052618_AMRSEG0004,NODE_4_length_382776_cov_184.347420,positive,168636-168967,96.23,89.46,Animal,Animal: avian,Animal:Avian:Wompoo fruit dove:liver,United States of America,2012/7/7,255.0,,
SRR5052618,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052618_AMRSEG0005,NODE_4_length_382776_cov_184.347420,negative,273931-275547,100.0,83.49,Animal,Animal: avian,Animal:Avian:Wompoo fruit dove:liver,United States of America,2012/7/7,255.0,,
SRR5052619,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052619_AMRSEG0001,NODE_10_length_195158_cov_186.483036,positive,94836-95522,100.0,90.25,Animal,Animal: avian,Animal:Avian:Western fairy bluebird:liver,United States of America,2012/5/3,255.0,,
SRR5052619,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052619_AMRSEG0002,NODE_12_length_178764_cov_194.006144,positive,134809-138195,96.62,81.66,Animal,Animal: avian,Animal:Avian:Western fairy bluebird:liver,United States of America,2012/5/3,255.0,,
SRR5052619,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052619_AMRSEG0003,NODE_3_length_464374_cov_198.178374,negative,115734-116276,99.45,80.18,Animal,Animal: avian,Animal:Avian:Western fairy bluebird:liver,United States of America,2012/5/3,255.0,,
SRR5052619,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052619_AMRSEG0004,NODE_6_length_382777_cov_171.562647,positive,107230-108846,100.0,83.49,Animal,Animal: avian,Animal:Avian:Western fairy bluebird:liver,United States of America,2012/5/3,255.0,,
SRR5052619,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052619_AMRSEG0005,NODE_6_length_382777_cov_171.562647,negative,213811-214142,96.23,89.46,Animal,Animal: avian,Animal:Avian:Western fairy bluebird:liver,United States of America,2012/5/3,255.0,,
SRR5052620,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052620_AMRSEG0001,NODE_10_length_195258_cov_220.624688,negative,99737-100423,100.0,90.25,Animal,Animal: avian,Animal:Avian:Jambu fruit dove:liver,United States of America,2011/5/6,255.0,,
SRR5052620,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052620_AMRSEG0002,NODE_11_length_178764_cov_219.291806,positive,134809-138195,96.62,81.66,Animal,Animal: avian,Animal:Avian:Jambu fruit dove:liver,United States of America,2011/5/6,255.0,,
SRR5052620,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052620_AMRSEG0003,NODE_3_length_464394_cov_219.049650,negative,115734-116276,99.45,80.18,Animal,Animal: avian,Animal:Avian:Jambu fruit dove:liver,United States of America,2011/5/6,255.0,,
SRR5052620,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052620_AMRSEG0004,NODE_6_length_382777_cov_215.061262,positive,168636-168967,96.23,89.46,Animal,Animal: avian,Animal:Avian:Jambu fruit dove:liver,United States of America,2011/5/6,255.0,,
SRR5052620,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052620_AMRSEG0005,NODE_6_length_382777_cov_215.061262,negative,273932-275548,100.0,83.49,Animal,Animal: avian,Animal:Avian:Jambu fruit dove:liver,United States of America,2011/5/6,255.0,,
SRR5052622,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052622_AMRSEG0001,NODE_11_length_195164_cov_180.411730,negative,99636-100322,100.0,90.25,Animal,Animal: avian,Animal:Avian:White double-toothed barbet:liver,United States of America,2015/6/29,255.0,,
SRR5052622,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052622_AMRSEG0002,NODE_12_length_178764_cov_181.866615,negative,40570-43956,96.62,81.66,Animal,Animal: avian,Animal:Avian:White double-toothed barbet:liver,United States of America,2015/6/29,255.0,,
SRR5052622,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052622_AMRSEG0003,NODE_2_length_464345_cov_181.898956,negative,115734-116276,99.45,80.18,Animal,Animal: avian,Animal:Avian:White double-toothed barbet:liver,United States of America,2015/6/29,255.0,,
SRR5052622,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052622_AMRSEG0004,NODE_5_length_382770_cov_162.803037,positive,168629-168960,96.23,89.46,Animal,Animal: avian,Animal:Avian:White double-toothed barbet:liver,United States of America,2015/6/29,255.0,,
SRR5052622,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052622_AMRSEG0005,NODE_5_length_382770_cov_162.803037,negative,273924-275540,100.0,83.49,Animal,Animal: avian,Animal:Avian:White double-toothed barbet:liver,United States of America,2015/6/29,255.0,,
SRR5052623,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052623_AMRSEG0001,NODE_12_length_195257_cov_163.058624,negative,99736-100422,100.0,90.25,Animal,Animal: avian,Animal:Avian:Golden-headed manakin:liver,United States of America,2008/2/1,255.0,,
SRR5052623,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052623_AMRSEG0002,NODE_13_length_178764_cov_151.397614,negative,40570-43956,96.62,81.66,Animal,Animal: avian,Animal:Avian:Golden-headed manakin:liver,United States of America,2008/2/1,255.0,,
SRR5052623,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052623_AMRSEG0003,NODE_19_length_115318_cov_168.209171,negative,87409-87951,99.45,80.18,Animal,Animal: avian,Animal:Avian:Golden-headed manakin:liver,United States of America,2008/2/1,255.0,,
SRR5052623,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052623_AMRSEG0004,NODE_20_length_94415_cov_157.378582,negative,5538-7154,100.0,83.49,Animal,Animal: avian,Animal:Avian:Golden-headed manakin:liver,United States of America,2008/2/1,255.0,,
SRR5052623,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052623_AMRSEG0005,NODE_5_length_267982_cov_136.792590,positive,168636-168967,96.23,89.46,Animal,Animal: avian,Animal:Avian:Golden-headed manakin:liver,United States of America,2008/2/1,255.0,,
SRR5052624,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052624_AMRSEG0001,NODE_10_length_195258_cov_162.243106,negative,99737-100423,100.0,90.25,Animal,Animal: avian,Animal:Avian:Wompoo fruit dove:duodenum,United States of America,2010/10/6,255.0,,
SRR5052624,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052624_AMRSEG0002,NODE_11_length_178764_cov_157.996542,positive,134809-138195,96.62,81.66,Animal,Animal: avian,Animal:Avian:Wompoo fruit dove:duodenum,United States of America,2010/10/6,255.0,,
SRR5052624,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052624_AMRSEG0003,NODE_16_length_114436_cov_158.350004,negative,5591-7207,100.0,83.49,Animal,Animal: avian,Animal:Avian:Wompoo fruit dove:duodenum,United States of America,2010/10/6,255.0,,
SRR5052624,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052624_AMRSEG0004,NODE_3_length_464378_cov_154.988516,negative,115734-116276,99.45,80.18,Animal,Animal: avian,Animal:Avian:Wompoo fruit dove:duodenum,United States of America,2010/10/6,255.0,,
SRR5052624,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052624_AMRSEG0005,NODE_7_length_268137_cov_154.785735,negative,99171-99502,96.23,89.46,Animal,Animal: avian,Animal:Avian:Wompoo fruit dove:duodenum,United States of America,2010/10/6,255.0,,
SRR5052627,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052627_AMRSEG0001,NODE_11_length_195071_cov_525.130938,negative,99550-100236,100.0,90.25,Animal,Animal: avian,Animal:Avian:Swallow tanager:liver,United States of America,2015/12/20,255.0,,
SRR5052627,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052627_AMRSEG0002,NODE_12_length_179906_cov_533.044861,positive,135951-139337,96.62,81.66,Animal,Animal: avian,Animal:Avian:Swallow tanager:liver,United States of America,2015/12/20,255.0,,
SRR5052627,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052627_AMRSEG0003,NODE_2_length_464383_cov_527.887692,negative,115734-116276,99.45,80.18,Animal,Animal: avian,Animal:Avian:Swallow tanager:liver,United States of America,2015/12/20,255.0,,
SRR5052627,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052627_AMRSEG0004,NODE_5_length_382778_cov_473.054001,positive,107231-108847,100.0,83.49,Animal,Animal: avian,Animal:Avian:Swallow tanager:liver,United States of America,2015/12/20,255.0,,
SRR5052627,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052627_AMRSEG0005,NODE_5_length_382778_cov_473.054001,negative,213812-214143,96.23,89.46,Animal,Animal: avian,Animal:Avian:Swallow tanager:liver,United States of America,2015/12/20,255.0,,
SRR5052628,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052628_AMRSEG0001,NODE_11_length_195070_cov_472.567051,positive,94836-95522,100.0,90.25,Animal,Animal: avian,Animal:Avian:Superb fruit dove:lung,United States of America,2014/3/24,255.0,,
SRR5052628,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052628_AMRSEG0002,NODE_12_length_179906_cov_475.703814,positive,135951-139337,96.62,81.66,Animal,Animal: avian,Animal:Avian:Superb fruit dove:lung,United States of America,2014/3/24,255.0,,
SRR5052628,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052628_AMRSEG0003,NODE_3_length_461970_cov_447.044665,positive,345695-346237,99.45,80.18,Animal,Animal: avian,Animal:Avian:Superb fruit dove:lung,United States of America,2014/3/24,255.0,,
SRR5052628,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052628_AMRSEG0004,NODE_6_length_382776_cov_401.793950,positive,168636-168967,96.23,89.46,Animal,Animal: avian,Animal:Avian:Superb fruit dove:lung,United States of America,2014/3/24,255.0,,
SRR5052628,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052628_AMRSEG0005,NODE_6_length_382776_cov_401.793950,negative,273931-275547,100.0,83.49,Animal,Animal: avian,Animal:Avian:Superb fruit dove:lung,United States of America,2014/3/24,255.0,,
SRR5052630,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052630_AMRSEG0001,NODE_11_length_195157_cov_196.391550,negative,99636-100322,100.0,90.25,Animal,Animal: avian,Animal:Avian:Spangled cotinga:small intestine,United States of America,2011/4/25,255.0,,
SRR5052630,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052630_AMRSEG0002,NODE_12_length_178764_cov_200.818356,negative,40570-43956,96.62,81.66,Animal,Animal: avian,Animal:Avian:Spangled cotinga:small intestine,United States of America,2011/4/25,255.0,,
SRR5052630,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052630_AMRSEG0003,NODE_16_length_114404_cov_188.457789,positive,107230-108846,100.0,83.49,Animal,Animal: avian,Animal:Avian:Spangled cotinga:small intestine,United States of America,2011/4/25,255.0,,
SRR5052630,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052630_AMRSEG0004,NODE_3_length_461968_cov_199.566831,negative,115734-116276,99.45,80.18,Animal,Animal: avian,Animal:Avian:Spangled cotinga:small intestine,United States of America,2011/4/25,255.0,,
SRR5052630,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052630_AMRSEG0005,NODE_8_length_268436_cov_181.310501,positive,168636-168967,96.23,89.46,Animal,Animal: avian,Animal:Avian:Spangled cotinga:small intestine,United States of America,2011/4/25,255.0,,
SRR5052631,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052631_AMRSEG0001,NODE_11_length_195258_cov_188.567304,negative,99737-100423,100.0,90.25,Animal,Animal: avian,Animal:Avian:Continental chaffinch:lung,United States of America,2000/3/23,255.0,,
SRR5052631,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052631_AMRSEG0002,NODE_12_length_178764_cov_195.583494,negative,40570-43956,96.62,81.66,Animal,Animal: avian,Animal:Avian:Continental chaffinch:lung,United States of America,2000/3/23,255.0,,
SRR5052631,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052631_AMRSEG0003,NODE_2_length_464374_cov_197.510313,negative,115734-116276,99.45,80.18,Animal,Animal: avian,Animal:Avian:Continental chaffinch:lung,United States of America,2000/3/23,255.0,,
SRR5052631,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052631_AMRSEG0004,NODE_5_length_382777_cov_177.528426,positive,168636-168967,96.23,89.46,Animal,Animal: avian,Animal:Avian:Continental chaffinch:lung,United States of America,2000/3/23,255.0,,
SRR5052631,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052631_AMRSEG0005,NODE_5_length_382777_cov_177.528426,negative,273932-275548,100.0,83.49,Animal,Animal: avian,Animal:Avian:Continental chaffinch:lung,United States of America,2000/3/23,255.0,,
SRR5052633,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052633_AMRSEG0001,NODE_10_length_179723_cov_183.637877,negative,40570-43956,96.62,81.66,Animal,Animal: avian,Animal:Avian:Long-tailed finch:lung,United States of America,2015/5/28,255.0,,
SRR5052633,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052633_AMRSEG0002,NODE_3_length_464374_cov_176.792925,positive,348099-348641,99.45,80.18,Animal,Animal: avian,Animal:Avian:Long-tailed finch:lung,United States of America,2015/5/28,255.0,,
SRR5052633,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052633_AMRSEG0003,NODE_5_length_382776_cov_177.393355,positive,107230-108846,100.0,83.49,Animal,Animal: avian,Animal:Avian:Long-tailed finch:lung,United States of America,2015/5/28,255.0,,
SRR5052633,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052633_AMRSEG0004,NODE_5_length_382776_cov_177.393355,negative,213810-214141,96.23,89.46,Animal,Animal: avian,Animal:Avian:Long-tailed finch:lung,United States of America,2015/5/28,255.0,,
SRR5052633,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052633_AMRSEG0005,NODE_9_length_195258_cov_189.858547,positive,94836-95522,100.0,90.25,Animal,Animal: avian,Animal:Avian:Long-tailed finch:lung,United States of America,2015/5/28,255.0,,
SRR5052634,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052634_AMRSEG0001,NODE_35_length_43406_cov_96.388483,negative,2654-4270,100.0,83.49,Animal,Animal: avian,Animal:Avian:Gouldian finch:lung,United States of America,1995/3/23,255.0,,
SRR5052634,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052634_AMRSEG0002,NODE_50_length_33090_cov_111.509341,positive,16145-16687,99.45,80.18,Animal,Animal: avian,Animal:Avian:Gouldian finch:lung,United States of America,1995/3/23,255.0,,
SRR5052634,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052634_AMRSEG0003,NODE_59_length_27884_cov_118.490960,positive,5630-9016,96.62,81.66,Animal,Animal: avian,Animal:Avian:Gouldian finch:lung,United States of America,1995/3/23,255.0,,
SRR5052634,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052634_AMRSEG0004,NODE_6_length_106484_cov_108.958035,positive,103546-103877,96.23,89.46,Animal,Animal: avian,Animal:Avian:Gouldian finch:lung,United States of America,1995/3/23,255.0,,
SRR5052634,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052634_AMRSEG0005,NODE_87_length_17864_cov_109.286950,negative,7592-8278,100.0,90.25,Animal,Animal: avian,Animal:Avian:Gouldian finch:lung,United States of America,1995/3/23,255.0,,
SRR5052635,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052635_AMRSEG0001,NODE_14_length_115221_cov_179.044513,negative,87393-87935,99.45,80.18,Animal,Animal: avian,Animal:Avian:Violceuos euphonia:liver,United States of America,2015/7/29,255.0,,
SRR5052635,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052635_AMRSEG0002,NODE_17_length_103160_cov_172.316682,negative,7639-8325,100.0,90.25,Animal,Animal: avian,Animal:Avian:Violceuos euphonia:liver,United States of America,2015/7/29,255.0,,
SRR5052635,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052635_AMRSEG0003,NODE_34_length_49661_cov_179.173817,negative,40570-43956,96.62,81.66,Animal,Animal: avian,Animal:Avian:Violceuos euphonia:liver,United States of America,2015/7/29,255.0,,
SRR5052635,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052635_AMRSEG0004,NODE_36_length_46341_cov_163.283871,positive,39199-40815,100.0,83.49,Animal,Animal: avian,Animal:Avian:Violceuos euphonia:liver,United States of America,2015/7/29,255.0,,
SRR5052635,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052635_AMRSEG0005,NODE_6_length_212802_cov_166.944495,positive,113476-113807,96.23,89.46,Animal,Animal: avian,Animal:Avian:Violceuos euphonia:liver,United States of America,2015/7/29,255.0,,
SRR5052636,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052636_AMRSEG0001,NODE_10_length_195257_cov_180.982192,positive,94836-95522,100.0,90.25,Animal,Animal: avian,Animal:Avian:Gouldian finch:liver,United States of America,2014/5/16,255.0,,
SRR5052636,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052636_AMRSEG0002,NODE_16_length_104117_cov_195.514512,positive,16191-16733,99.45,80.18,Animal,Animal: avian,Animal:Avian:Gouldian finch:liver,United States of America,2014/5/16,255.0,,
SRR5052636,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052636_AMRSEG0003,NODE_30_length_46521_cov_164.532589,positive,39369-40985,100.0,83.49,Animal,Animal: avian,Animal:Avian:Gouldian finch:liver,United States of America,2014/5/16,255.0,,
SRR5052636,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052636_AMRSEG0004,NODE_34_length_29822_cov_203.926678,negative,18938-22324,96.62,81.66,Animal,Animal: avian,Animal:Avian:Gouldian finch:liver,United States of America,2014/5/16,255.0,,
SRR5052636,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052636_AMRSEG0005,NODE_8_length_212837_cov_169.457467,positive,113494-113825,96.23,89.46,Animal,Animal: avian,Animal:Avian:Gouldian finch:liver,United States of America,2014/5/16,255.0,,
SRR5052637,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052637_AMRSEG0001,NODE_11_length_195158_cov_164.042815,positive,94836-95522,100.0,90.25,Animal,Animal: avian,Animal:Avian:Gouldian finch:lung,United States of America,1996/8/21,255.0,,
SRR5052637,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052637_AMRSEG0002,NODE_12_length_190870_cov_159.687328,negative,115734-116276,99.45,80.18,Animal,Animal: avian,Animal:Avian:Gouldian finch:lung,United States of America,1996/8/21,255.0,,
SRR5052637,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052637_AMRSEG0003,NODE_13_length_178947_cov_157.080136,positive,134992-138378,96.62,81.66,Animal,Animal: avian,Animal:Avian:Gouldian finch:lung,United States of America,1996/8/21,255.0,,
SRR5052637,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052637_AMRSEG0004,NODE_5_length_314728_cov_151.842220,positive,168636-168967,96.23,89.46,Animal,Animal: avian,Animal:Avian:Gouldian finch:lung,United States of America,1996/8/21,255.0,,
SRR5052637,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052637_AMRSEG0005,NODE_5_length_314728_cov_151.842220,negative,273931-275547,100.0,83.49,Animal,Animal: avian,Animal:Avian:Gouldian finch:lung,United States of America,1996/8/21,255.0,,
SRR5052640,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052640_AMRSEG0001,NODE_10_length_195257_cov_208.130163,positive,94836-95522,100.0,90.25,Animal,Animal: avian,Animal:Avian:Western golden-hooded tanager:liver,United States of America,2010/10/27,255.0,,
SRR5052640,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052640_AMRSEG0002,NODE_11_length_179906_cov_206.493163,negative,40570-43956,96.62,81.66,Animal,Animal: avian,Animal:Avian:Western golden-hooded tanager:liver,United States of America,2010/10/27,255.0,,
SRR5052640,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052640_AMRSEG0003,NODE_3_length_461968_cov_201.576785,negative,115734-116276,99.45,80.18,Animal,Animal: avian,Animal:Avian:Western golden-hooded tanager:liver,United States of America,2010/10/27,255.0,,
SRR5052640,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052640_AMRSEG0004,NODE_6_length_382776_cov_182.742097,positive,107230-108846,100.0,83.49,Animal,Animal: avian,Animal:Avian:Western golden-hooded tanager:liver,United States of America,2010/10/27,255.0,,
SRR5052640,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052640_AMRSEG0005,NODE_6_length_382776_cov_182.742097,negative,213810-214141,96.23,89.46,Animal,Animal: avian,Animal:Avian:Western golden-hooded tanager:liver,United States of America,2010/10/27,255.0,,
SRR5052641,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052641_AMRSEG0001,NODE_10_length_195258_cov_194.734717,negative,99737-100423,100.0,90.25,Animal,Animal: avian,Animal:Avian:Sulawesi superb fruit dove:liver,United States of America,2007/9/21,255.0,,
SRR5052641,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052641_AMRSEG0002,NODE_11_length_178764_cov_196.611340,positive,134809-138195,96.62,81.66,Animal,Animal: avian,Animal:Avian:Sulawesi superb fruit dove:liver,United States of America,2007/9/21,255.0,,
SRR5052641,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052641_AMRSEG0003,NODE_2_length_464369_cov_197.147618,negative,115734-116276,99.45,80.18,Animal,Animal: avian,Animal:Avian:Sulawesi superb fruit dove:liver,United States of America,2007/9/21,255.0,,
SRR5052641,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052641_AMRSEG0004,NODE_4_length_382775_cov_188.841121,positive,168634-168965,96.23,89.46,Animal,Animal: avian,Animal:Avian:Sulawesi superb fruit dove:liver,United States of America,2007/9/21,255.0,,
SRR5052641,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052641_AMRSEG0005,NODE_4_length_382775_cov_188.841121,negative,273930-275546,100.0,83.49,Animal,Animal: avian,Animal:Avian:Sulawesi superb fruit dove:liver,United States of America,2007/9/21,255.0,,
SRR5052643,genavense,36812,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR5052643_AMRSEG0001,NODE_16_length_71588_cov_134.901139,positive,16189-16731,99.45,80.18,Animal,Animal: avian,Animal:Avian:Long-tailed finch:liver,United States of America,2015/5/28,255.0,,
SRR5052643,genavense,36812,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR5052643_AMRSEG0002,NODE_34_length_46259_cov_113.364664,positive,39144-40760,100.0,83.49,Animal,Animal: avian,Animal:Avian:Long-tailed finch:liver,United States of America,2015/5/28,255.0,,
SRR5052643,genavense,36812,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5052643_AMRSEG0003,NODE_60_length_27969_cov_133.241238,positive,5676-9062,96.62,81.66,Animal,Animal: avian,Animal:Avian:Long-tailed finch:liver,United States of America,2015/5/28,255.0,,
SRR5052643,genavense,36812,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5052643_AMRSEG0004,NODE_7_length_106494_cov_117.273078,negative,2610-2941,96.23,89.46,Animal,Animal: avian,Animal:Avian:Long-tailed finch:liver,United States of America,2015/5/28,255.0,,
SRR5052643,genavense,36812,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5052643_AMRSEG0005,NODE_86_length_17918_cov_121.359227,negative,7621-8307,100.0,90.25,Animal,Animal: avian,Animal:Avian:Long-tailed finch:liver,United States of America,2015/5/28,255.0,,