strain_accession,species_name,species_id,gene_name,card_accession,mechanism,AMR_gene_ref_strain,card_drug_class,definition,amr_seqid,contig,strand,position,coverage,identity,host,source,source_detail,country,date,MLST,subspecies_id,subspecies_name
GCF_001187505.1,goodii,134601,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_001187505.1_AMRSEG0001,NZ_CP012150.1,positive,687513-688998,98.09,90.78,Environment,Environment: wild environment,Environment:Wild environment:soil,China,2015/7/27,148.0,,
GCF_001187505.1,goodii,134601,vanR_in_vanO_cl,ARO:3002930,antibiotic target alteration,Rhodococcus hoagii,glycopeptide antibiotic,"Also known as vanRO, is a vanR variant found in the vanO gene cluster.",GCF_001187505.1_AMRSEG0002,NZ_CP012150.1,negative,1302119-1302818,99.29,83.86,Environment,Environment: wild environment,Environment:Wild environment:soil,China,2015/7/27,148.0,,
GCF_001187505.1,goodii,134601,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_001187505.1_AMRSEG0003,NZ_CP012150.1,negative,1948792-1949398,95.42,84.39,Environment,Environment: wild environment,Environment:Wild environment:soil,China,2015/7/27,148.0,,
GCF_001187505.1,goodii,134601,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_001187505.1_AMRSEG0004,NZ_CP012150.1,negative,3092968-3094211,98.41,90.84,Environment,Environment: wild environment,Environment:Wild environment:soil,China,2015/7/27,148.0,,
GCF_001187505.1,goodii,134601,tap,ARO:3000343,antibiotic efflux,Mycolicibacterium fortuitum,tetracycline antibiotic,"Efflux pump proteins contained within Mycobacterial genomes which confer resistance to a number of different antibiotics including aminoglycosides, and tetracyclines.",GCF_001187505.1_AMRSEG0005,NZ_CP012150.1,negative,3245959-3247162,97.64,81.86,Environment,Environment: wild environment,Environment:Wild environment:soil,China,2015/7/27,148.0,,
GCF_001187505.1,goodii,134601,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_001187505.1_AMRSEG0006,NZ_CP012150.1,negative,4436716-4437049,96.81,95.81,Environment,Environment: wild environment,Environment:Wild environment:soil,China,2015/7/27,148.0,,
GCF_001187505.1,goodii,134601,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_001187505.1_AMRSEG0007,NZ_CP012150.1,negative,6327749-6328435,100.0,84.13,Environment,Environment: wild environment,Environment:Wild environment:soil,China,2015/7/27,148.0,,
GCF_001187505.1,goodii,134601,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_001187505.1_AMRSEG0008,NZ_CP012150.1,positive,6567135-6568286,99.22,88.29,Environment,Environment: wild environment,Environment:Wild environment:soil,China,2015/7/27,148.0,,
GCF_001187505.1,goodii,134601,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_001187505.1_AMRSEG0009,NZ_CP012150.1,negative,6842860-6846351,98.85,81.23,Environment,Environment: wild environment,Environment:Wild environment:soil,China,2015/7/27,148.0,,
GCF_001187505.1,goodii,134601,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_001187505.1_AMRSEG0010,NZ_CP012150.1,negative,6968761-6969192,100.0,91.2,Environment,Environment: wild environment,Environment:Wild environment:soil,China,2015/7/27,148.0,,