strain_accession,species_id,species_name,vfg_id,gene_name,genbank_id,vf_id,vf_name,vf_full_name,vfc_id,vfc_name,source_organism,source_strain,vf_seqid,contig_name,strand,position,coverage,identity,host,source,source_detail,country,date,MLST,subspecies_id,subspecies_name
GCF_001021505.1,512402,heraklionense,VFG002394,esxM,,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001021505.1_VFSEQ0001,NZ_LDPO01000001.1,positive,271889-272185,100.0,81.48,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary :sputum,United States of America,2015/6/8,94.0,,
GCF_001021505.1,512402,heraklionense,VFG002400,esxN,YP_177838,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001021505.1_VFSEQ0002,NZ_LDPO01000001.1,positive,272200-272484,100.0,81.4,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary :sputum,United States of America,2015/6/8,94.0,,
GCF_001021505.1,512402,heraklionense,VFG002400,esxN,YP_177838,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001021505.1_VFSEQ0003,NZ_LDPO01000001.1,positive,274622-274904,99.3,83.04,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary :sputum,United States of America,2015/6/8,94.0,,
GCF_001021505.1,512402,heraklionense,VFG022098,esxH,NP_214802,VF0521,ESX-3,,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001021505.1_VFSEQ0004,NZ_LDPO01000004.1,negative,4651-4935,97.94,81.75,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary :sputum,United States of America,2015/6/8,94.0,,
GCF_001021505.1,512402,heraklionense,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001021505.1_VFSEQ0005,NZ_LDPO01000004.1,positive,72928-73620,100.0,81.82,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary :sputum,United States of America,2015/6/8,94.0,,
GCF_001021505.1,512402,heraklionense,VFG001811,fbpC,YP_177694,VF0311,Antigen 85,,VFC0001,Adherence,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001021505.1_VFSEQ0006,NZ_LDPO01000007.1,positive,102391-103312,90.03,80.06,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary :sputum,United States of America,2015/6/8,94.0,,
GCF_001021505.1,512402,heraklionense,VFG001819,mbtG,NP_216894,VF0299,Mycobactin,,VFC0272,Nutritional/Metabolic factor,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001021505.1_VFSEQ0007,NZ_LDPO01000009.1,negative,175331-176620,98.46,80.48,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary :sputum,United States of America,2015/6/8,94.0,,
GCF_001021505.1,512402,heraklionense,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001021505.1_VFSEQ0008,NZ_LDPO01000010.1,positive,28751-30037,100.0,88.03,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary :sputum,United States of America,2015/6/8,94.0,,
GCF_001021505.1,512402,heraklionense,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001021505.1_VFSEQ0009,NZ_LDPO01000017.1,negative,18252-18952,94.22,84.17,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary :sputum,United States of America,2015/6/8,94.0,,
GCF_001021505.1,512402,heraklionense,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001021505.1_VFSEQ0010,NZ_LDPO01000029.1,positive,25391-27643,94.94,84.2,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary :sputum,United States of America,2015/6/8,94.0,,
GCF_001021505.1,512402,heraklionense,VFG002394,esxM,,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001021505.1_VFSEQ0011,NZ_LDPO01000043.1,negative,1-241,81.14,82.16,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary :sputum,United States of America,2015/6/8,94.0,,
GCF_001021505.1,512402,heraklionense,VFG002401,eccA5,NP_216314,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001021505.1_VFSEQ0012,NZ_LDPO01000043.1,negative,945-2740,97.93,80.13,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary :sputum,United States of America,2015/6/8,94.0,,
GCF_001021505.1,512402,heraklionense,VFG002399,Rv1794,NP_216310,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001021505.1_VFSEQ0013,NZ_LDPO01000043.1,negative,7414-8292,97.34,81.11,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary :sputum,United States of America,2015/6/8,94.0,,
GCF_001021505.1,512402,heraklionense,VFG002400,esxN,YP_177838,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001021505.1_VFSEQ0014,NZ_LDPO01000063.1,negative,3-285,99.3,82.33,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary :sputum,United States of America,2015/6/8,94.0,,
GCF_001021505.1,512402,heraklionense,VFG002394,esxM,,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001021505.1_VFSEQ0015,NZ_LDPO01000063.1,negative,300-596,100.0,81.14,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary :sputum,United States of America,2015/6/8,94.0,,
GCF_001021505.1,512402,heraklionense,VFG002400,esxN,YP_177838,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001021505.1_VFSEQ0016,NZ_LDPO01000068.1,negative,6-233,80.0,82.46,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary :sputum,United States of America,2015/6/8,94.0,,
SRR14027494,512402,heraklionense,VFG002399,Rv1794,NP_216310,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR14027494_VFSEQ0001,NODE_122_length_8273_cov_112.957491,negative,7223-8101,97.34,81.0,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,India,2017/12/1,,,
SRR14027494,512402,heraklionense,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR14027494_VFSEQ0002,NODE_1_length_180175_cov_114.954750,negative,2768-3462,93.41,83.74,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,India,2017/12/1,,,
SRR14027494,512402,heraklionense,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR14027494_VFSEQ0003,NODE_1_length_180175_cov_114.954750,positive,176714-177408,93.41,83.74,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,India,2017/12/1,,,
SRR14027494,512402,heraklionense,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR14027494_VFSEQ0004,NODE_28_length_49124_cov_101.742953,positive,35666-36952,100.0,88.11,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,India,2017/12/1,,,
SRR14027494,512402,heraklionense,VFG002400,esxN,YP_177838,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR14027494_VFSEQ0005,NODE_299_length_313_cov_572.368000,negative,3-285,99.3,82.33,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,India,2017/12/1,,,
SRR14027494,512402,heraklionense,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR14027494_VFSEQ0006,NODE_47_length_32399_cov_103.506309,positive,19861-22120,95.15,83.69,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,India,2017/12/1,,,
SRR14027494,512402,heraklionense,VFG001811,fbpC,YP_177694,VF0311,Antigen 85,,VFC0001,Adherence,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR14027494_VFSEQ0007,NODE_78_length_19523_cov_117.928058,positive,3310-4231,90.03,81.47,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,India,2017/12/1,,,