strain_accession,species_name,species_id,gene_name,card_accession,mechanism,AMR_gene_ref_strain,card_drug_class,definition,amr_seqid,contig,strand,position,coverage,identity,host,source,source_detail,country,date,MLST,subspecies_id,subspecies_name
DRR236242,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,DRR236242_AMRSEG0001,NODE_107_length_14591_cov_35.384361,negative,4099-5687,99.69,85.66,Animal,Animal: domestic animals,Animal:Domestic Animals:Felis catus,Japan,2019/1/1,38.0,,
DRR236242,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,DRR236242_AMRSEG0002,NODE_32_length_60520_cov_38.128753,positive,15408-15953,100.0,83.52,Animal,Animal: domestic animals,Animal:Domestic Animals:Felis catus,Japan,2019/1/1,38.0,,
DRR236242,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",DRR236242_AMRSEG0003,NODE_4_length_198089_cov_38.166574,negative,105032-108454,97.13,80.37,Animal,Animal: domestic animals,Animal:Domestic Animals:Felis catus,Japan,2019/1/1,38.0,,
DRR236242,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,DRR236242_AMRSEG0004,NODE_65_length_33892_cov_37.313075,positive,11353-12039,100.0,90.97,Animal,Animal: domestic animals,Animal:Domestic Animals:Felis catus,Japan,2019/1/1,38.0,,
DRR236242,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,DRR236242_AMRSEG0005,NODE_98_length_17220_cov_33.152766,positive,1519-1826,89.28,87.01,Animal,Animal: domestic animals,Animal:Domestic Animals:Felis catus,Japan,2019/1/1,38.0,,
ERR3281097,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR3281097_AMRSEG0001,NODE_10_length_218776_cov_39.233095,positive,66226-66912,100.0,90.97,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Netherlands,2016/1/1,38.0,,
ERR3281097,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,ERR3281097_AMRSEG0002,NODE_1_length_772162_cov_41.258766,positive,69642-70187,100.0,83.52,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Netherlands,2016/1/1,38.0,,
ERR3281097,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR3281097_AMRSEG0003,NODE_2_length_419537_cov_39.333115,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Netherlands,2016/1/1,38.0,,
ERR3281097,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR3281097_AMRSEG0004,NODE_35_length_38339_cov_37.384836,negative,36261-36568,89.28,87.01,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Netherlands,2016/1/1,38.0,,
ERR3281097,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,ERR3281097_AMRSEG0005,NODE_8_length_247805_cov_37.932648,negative,46424-48012,99.69,85.66,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Netherlands,2016/1/1,38.0,,
ERR3281098,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,ERR3281098_AMRSEG0001,NODE_21_length_107171_cov_53.182825,negative,13264-14852,99.69,86.29,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Netherlands,2016/1/1,418.0,,
ERR3281098,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,ERR3281098_AMRSEG0002,NODE_24_length_97156_cov_54.636359,positive,26712-27257,100.0,82.78,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Netherlands,2016/1/1,418.0,,
ERR3281098,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR3281098_AMRSEG0003,NODE_32_length_60311_cov_55.804143,negative,36133-36440,89.28,87.66,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Netherlands,2016/1/1,418.0,,
ERR3281098,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR3281098_AMRSEG0004,NODE_5_length_352751_cov_55.389412,negative,230174-230860,100.0,89.81,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Netherlands,2016/1/1,418.0,,
ERR3281099,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR3281099_AMRSEG0001,NODE_11_length_119242_cov_41.379580,positive,100099-100785,100.0,90.39,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Netherlands,2016/1/1,222.0,,
ERR3281099,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,ERR3281099_AMRSEG0002,NODE_2_length_259592_cov_40.248855,negative,8494-10086,99.94,85.63,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Netherlands,2016/1/1,222.0,,
ERR3281099,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,ERR3281099_AMRSEG0003,NODE_3_length_251995_cov_43.731813,negative,187967-188512,100.0,82.6,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Netherlands,2016/1/1,222.0,,
ERR3281099,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR3281099_AMRSEG0004,NODE_67_length_32451_cov_39.470236,positive,1524-1831,89.28,87.99,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Netherlands,2016/1/1,222.0,,
ERR3281099,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR3281099_AMRSEG0005,NODE_77_length_23937_cov_40.679484,negative,4203-7640,97.13,80.45,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Netherlands,2016/1/1,222.0,,
ERR3281100,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,ERR3281100_AMRSEG0001,NODE_19_length_99384_cov_40.962193,negative,38351-38896,100.0,83.88,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Netherlands,2016/1/1,570.0,,
ERR3281100,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR3281100_AMRSEG0002,NODE_37_length_51227_cov_38.141623,negative,13139-13825,100.0,89.81,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Netherlands,2016/1/1,570.0,,
ERR3281100,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,ERR3281100_AMRSEG0003,NODE_3_length_230285_cov_38.433707,negative,64598-66186,99.69,85.47,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Netherlands,2016/1/1,570.0,,
ERR3281100,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR3281100_AMRSEG0004,NODE_41_length_47723_cov_38.072304,positive,34575-34882,89.28,88.31,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Netherlands,2016/1/1,570.0,,
ERR5262829,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR5262829_AMRSEG0002,NODE_3_length_309644_cov_162.721417,positive,89676-93098,97.13,80.37,,,,Switzerland,,38.0,,
ERR5262829,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR5262829_AMRSEG0003,NODE_58_length_34100_cov_166.687193,positive,11351-12037,100.0,90.97,,,,Switzerland,,38.0,,
ERR5262829,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR5262829_AMRSEG0004,NODE_81_length_17241_cov_166.989289,negative,15416-15723,89.28,87.01,,,,Switzerland,,38.0,,
ERR5262829,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,ERR5262829_AMRSEG0005,NODE_86_length_14871_cov_158.166397,negative,4103-5691,99.69,85.66,,,,Switzerland,,38.0,,
ERR5262832,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,ERR5262832_AMRSEG0001,NODE_17_length_103353_cov_204.386291,positive,15371-15916,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2011/7/12,38.0,,
ERR5262832,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR5262832_AMRSEG0002,NODE_1_length_289076_cov_208.483137,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2011/7/12,38.0,,
ERR5262832,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR5262832_AMRSEG0003,NODE_58_length_34232_cov_217.118441,positive,11485-12171,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2011/7/12,38.0,,
ERR5262832,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR5262832_AMRSEG0004,NODE_85_length_17210_cov_192.056278,negative,15385-15692,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2011/7/12,38.0,,
ERR5262832,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,ERR5262832_AMRSEG0005,NODE_90_length_14803_cov_190.350068,positive,9149-10737,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2011/7/12,38.0,,
ERR5262835,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,ERR5262835_AMRSEG0001,NODE_38_length_60149_cov_226.587275,positive,15235-15780,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2007/1/15,38.0,,
ERR5262835,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR5262835_AMRSEG0002,NODE_60_length_34102_cov_244.216986,positive,11348-12034,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2007/1/15,38.0,,
ERR5262835,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,ERR5262835_AMRSEG0003,NODE_7_length_172854_cov_211.289529,positive,167057-168645,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2007/1/15,38.0,,
ERR5262835,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR5262835_AMRSEG0004,NODE_81_length_16453_cov_214.548566,negative,14375-14682,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2007/1/15,38.0,,
ERR5262840,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,ERR5262840_AMRSEG0001,NODE_12_length_133020_cov_193.853983,negative,4132-5720,99.69,85.66,Homo sapiens,Homo sapiens,Homo sapiens:Biopsy,Switzerland,2010/12/6,38.0,,
ERR5262840,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR5262840_AMRSEG0002,NODE_1_length_289200_cov_207.150354,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens,Homo sapiens:Biopsy,Switzerland,2010/12/6,38.0,,
ERR5262840,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,ERR5262840_AMRSEG0003,NODE_34_length_60555_cov_208.735701,positive,15483-16028,100.0,83.52,Homo sapiens,Homo sapiens,Homo sapiens:Biopsy,Switzerland,2010/12/6,38.0,,
ERR5262840,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR5262840_AMRSEG0004,NODE_55_length_33972_cov_220.044413,positive,11348-12034,100.0,90.97,Homo sapiens,Homo sapiens,Homo sapiens:Biopsy,Switzerland,2010/12/6,38.0,,
ERR5262840,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR5262840_AMRSEG0005,NODE_80_length_17489_cov_205.595317,negative,15411-15718,89.28,87.01,Homo sapiens,Homo sapiens,Homo sapiens:Biopsy,Switzerland,2010/12/6,38.0,,
ERR5262846,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR5262846_AMRSEG0001,NODE_1_length_285819_cov_148.447354,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2011/6/3,38.0,,
ERR5262846,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR5262846_AMRSEG0002,NODE_22_length_89672_cov_142.901617,negative,22062-22748,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2011/6/3,38.0,,
ERR5262846,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,ERR5262846_AMRSEG0003,NODE_35_length_59917_cov_153.938885,positive,15003-15548,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2011/6/3,38.0,,
ERR5262846,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR5262846_AMRSEG0004,NODE_87_length_17463_cov_148.574253,negative,15385-15692,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2011/6/3,38.0,,
ERR5262846,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,ERR5262846_AMRSEG0005,NODE_95_length_14805_cov_147.174535,positive,9151-10739,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2011/6/3,38.0,,
ERR5262847,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,ERR5262847_AMRSEG0001,NODE_19_length_103404_cov_129.240679,positive,15390-15935,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2012/10/2,38.0,,
ERR5262847,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR5262847_AMRSEG0002,NODE_1_length_289916_cov_135.449662,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2012/10/2,38.0,,
ERR5262847,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR5262847_AMRSEG0003,NODE_24_length_88968_cov_126.870862,positive,66226-66912,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2012/10/2,38.0,,
ERR5262847,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR5262847_AMRSEG0004,NODE_80_length_17517_cov_131.275524,negative,15439-15746,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2012/10/2,38.0,,
ERR5262847,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,ERR5262847_AMRSEG0005,NODE_87_length_14795_cov_133.007127,positive,9054-10642,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2012/10/2,38.0,,
ERR5262849,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,ERR5262849_AMRSEG0001,NODE_100_length_14856_cov_101.626851,positive,9163-10751,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2012/5/3,38.0,,
ERR5262849,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR5262849_AMRSEG0002,NODE_1_length_260140_cov_103.053576,negative,196159-199581,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2012/5/3,38.0,,
ERR5262849,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,ERR5262849_AMRSEG0003,NODE_34_length_60315_cov_108.289252,negative,44543-45088,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2012/5/3,38.0,,
ERR5262849,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR5262849_AMRSEG0004,NODE_48_length_46208_cov_110.046722,negative,21929-22615,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2012/5/3,38.0,,
ERR5262849,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR5262849_AMRSEG0005,NODE_48_length_46208_cov_110.046722,positive,23594-24280,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2012/5/3,38.0,,
ERR5262849,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR5262849_AMRSEG0006,NODE_93_length_17240_cov_101.052570,negative,15415-15722,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2012/5/3,38.0,,
ERR5262857,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,ERR5262857_AMRSEG0001,NODE_35_length_60150_cov_184.081332,positive,15093-15638,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2013/3/22,38.0,,
ERR5262857,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR5262857_AMRSEG0002,NODE_3_length_270283_cov_180.410355,negative,192589-196011,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2013/3/22,38.0,,
ERR5262857,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,ERR5262857_AMRSEG0003,NODE_48_length_49529_cov_168.017891,negative,4004-5592,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2013/3/22,38.0,,
ERR5262857,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR5262857_AMRSEG0004,NODE_61_length_34227_cov_189.384440,negative,22057-22743,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2013/3/22,38.0,,
ERR5262857,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR5262857_AMRSEG0005,NODE_83_length_17189_cov_183.284597,negative,15111-15418,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2013/3/22,38.0,,
ERR5262860,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,ERR5262860_AMRSEG0001,NODE_32_length_60151_cov_220.614133,positive,15237-15782,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2014/2/12,38.0,,
ERR5262860,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR5262860_AMRSEG0002,NODE_4_length_187963_cov_218.191123,positive,60560-63982,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2014/2/12,38.0,,
ERR5262860,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR5262860_AMRSEG0003,NODE_59_length_34091_cov_224.886770,positive,11349-12035,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2014/2/12,38.0,,
ERR5262860,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR5262860_AMRSEG0004,NODE_92_length_17525_cov_210.228553,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2014/2/12,38.0,,
ERR5262860,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,ERR5262860_AMRSEG0005,NODE_93_length_17441_cov_202.343135,positive,9014-10602,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2014/2/12,38.0,,
ERR5262862,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,ERR5262862_AMRSEG0001,NODE_19_length_103104_cov_159.785357,positive,15093-15638,100.0,83.52,Homo sapiens,Homo sapiens,Homo sapiens:Surgical specimen,Switzerland,2014/3/5,38.0,,
ERR5262862,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR5262862_AMRSEG0002,NODE_4_length_217079_cov_169.742683,negative,123982-127404,97.13,80.37,Homo sapiens,Homo sapiens,Homo sapiens:Surgical specimen,Switzerland,2014/3/5,38.0,,
ERR5262862,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR5262862_AMRSEG0003,NODE_59_length_34034_cov_173.336051,negative,22000-22686,100.0,90.97,Homo sapiens,Homo sapiens,Homo sapiens:Surgical specimen,Switzerland,2014/3/5,38.0,,
ERR5262862,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR5262862_AMRSEG0004,NODE_82_length_17489_cov_162.433146,negative,15411-15718,89.28,87.01,Homo sapiens,Homo sapiens,Homo sapiens:Surgical specimen,Switzerland,2014/3/5,38.0,,
ERR5262862,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,ERR5262862_AMRSEG0005,NODE_91_length_14923_cov_156.843271,negative,4177-5765,99.69,85.66,Homo sapiens,Homo sapiens,Homo sapiens:Surgical specimen,Switzerland,2014/3/5,38.0,,
ERR5262943,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR5262943_AMRSEG0001,NODE_19_length_101992_cov_216.858715,positive,71778-72085,89.28,87.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2014/11/10,38.0,,
ERR5262943,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR5262943_AMRSEG0002,NODE_2_length_298977_cov_224.268786,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2014/11/10,38.0,,
ERR5262943,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,ERR5262943_AMRSEG0003,NODE_35_length_60631_cov_224.329316,positive,15571-16116,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2014/11/10,38.0,,
ERR5262943,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR5262943_AMRSEG0004,NODE_61_length_33916_cov_235.982070,positive,11150-11836,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2014/11/10,38.0,,
ERR5262943,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,ERR5262943_AMRSEG0005,NODE_82_length_15576_cov_207.376523,positive,9922-11510,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2014/11/10,38.0,,
ERR5262945,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR5262945_AMRSEG0001,NODE_2_length_289273_cov_106.730186,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2007/9/17,106.0,,
ERR5262945,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,ERR5262945_AMRSEG0002,NODE_36_length_60159_cov_107.448649,positive,15245-15790,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2007/9/17,106.0,,
ERR5262945,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR5262945_AMRSEG0003,NODE_54_length_48138_cov_109.439688,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2007/9/17,106.0,,
ERR5262945,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR5262945_AMRSEG0004,NODE_65_length_34125_cov_111.199753,positive,11379-12065,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2007/9/17,106.0,,
ERR5262945,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,ERR5262945_AMRSEG0005,NODE_96_length_14707_cov_100.175020,positive,8998-10586,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:BAL,Switzerland,2007/9/17,106.0,,
ERR5263029,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR5263029_AMRSEG0001,NODE_101_length_17583_cov_164.223573,negative,15505-15812,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2008/8/25,38.0,,
ERR5263029,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,ERR5263029_AMRSEG0002,NODE_15_length_102844_cov_158.887674,positive,15232-15777,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2008/8/25,38.0,,
ERR5263029,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR5263029_AMRSEG0003,NODE_65_length_34145_cov_172.845226,positive,11403-12089,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2008/8/25,38.0,,
ERR5263029,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR5263029_AMRSEG0004,NODE_6_length_152756_cov_169.874965,positive,15877-19299,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2008/8/25,38.0,,
ERR5263029,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,ERR5263029_AMRSEG0005,NODE_9_length_133714_cov_155.925612,negative,4101-5689,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2008/8/25,38.0,,
ERR5263031,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR5263031_AMRSEG0001,NODE_16_length_102119_cov_199.510984,positive,71905-72212,89.28,87.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2008/11/18,38.0,,
ERR5263031,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR5263031_AMRSEG0002,NODE_21_length_88964_cov_186.131438,positive,66226-66912,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2008/11/18,38.0,,
ERR5263031,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR5263031_AMRSEG0003,NODE_2_length_236924_cov_221.119631,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2008/11/18,38.0,,
ERR5263031,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,ERR5263031_AMRSEG0004,NODE_35_length_60496_cov_200.243675,positive,15093-15638,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2008/11/18,38.0,,
ERR5263031,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,ERR5263031_AMRSEG0005,NODE_97_length_14821_cov_189.517008,positive,9122-10710,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,2008/11/18,38.0,,
GCA_000524095.1,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,GCA_000524095.1_AMRSEG0001,JANY01000001.1,negative,85322-86910,99.69,85.66,,,,,2014/1/27,38.0,,
GCA_000524095.1,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCA_000524095.1_AMRSEG0002,JANY01000001.1,negative,891889-892575,100.0,90.97,,,,,2014/1/27,38.0,,
GCA_000524095.1,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCA_000524095.1_AMRSEG0003,JANY01000001.1,negative,1334381-1337801,97.08,80.37,,,,,2014/1/27,38.0,,
GCA_000524095.1,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,GCA_000524095.1_AMRSEG0004,JANY01000001.1,positive,1914369-1914913,99.82,83.52,,,,,2014/1/27,38.0,,
GCA_000524095.1,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCA_000524095.1_AMRSEG0005,JANY01000011.1,negative,55973-56280,89.28,87.01,,,,,2014/1/27,38.0,,
GCF_000523615.1,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_000523615.1_AMRSEG0001,NZ_JAOA01000001.1,positive,389795-390481,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary :bronchoscopy,United States of America,2014/1/27,,,
GCF_000523615.1,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,GCF_000523615.1_AMRSEG0002,NZ_JAOA01000001.1,positive,1195771-1197359,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary :bronchoscopy,United States of America,2014/1/27,,,
GCF_000523615.1,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_000523615.1_AMRSEG0003,NZ_JAOA01000010.1,positive,207530-210952,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary :bronchoscopy,United States of America,2014/1/27,,,
GCF_000523615.1,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,GCF_000523615.1_AMRSEG0004,NZ_JAOA01000018.1,negative,43787-44332,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary :bronchoscopy,United States of America,2014/1/27,,,
GCF_000523615.1,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_000523615.1_AMRSEG0005,NZ_JAOA01000019.1,positive,18291-18598,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary :bronchoscopy,United States of America,2014/1/27,,,
GCF_002085795.1,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_002085795.1_AMRSEG0004,NZ_CP019886.1,positive,4510144-4510830,100.0,90.97,,,,,2017/4/11,746.0,,
GCF_002085795.1,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,GCF_002085795.1_AMRSEG0005,NZ_CP019886.1,positive,5310089-5311677,99.69,85.66,,,,,2017/4/11,746.0,,
GCF_002085815.1,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_002085815.1_AMRSEG0001,NZ_CP019887.1,positive,334141-334448,89.28,87.01,,,,,2017/4/11,38.0,,
GCF_002085815.1,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,GCF_002085815.1_AMRSEG0002,NZ_CP019887.1,negative,3645766-3646311,100.0,83.52,,,,,2017/4/11,38.0,,
GCF_002085815.1,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_002085815.1_AMRSEG0003,NZ_CP019887.1,positive,4224916-4228338,97.13,80.37,,,,,2017/4/11,38.0,,
GCF_002085815.1,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_002085815.1_AMRSEG0004,NZ_CP019887.1,positive,4621328-4622014,100.0,90.97,,,,,2017/4/11,38.0,,
GCF_002085815.1,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,GCF_002085815.1_AMRSEG0005,NZ_CP019887.1,positive,5423450-5425038,99.69,85.66,,,,,2017/4/11,38.0,,
GCF_002085835.1,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_002085835.1_AMRSEG0001,NZ_CP019888.1,positive,381471-381778,89.28,87.01,,,,,2017/4/11,38.0,,
GCF_002085835.1,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,GCF_002085835.1_AMRSEG0002,NZ_CP019888.1,negative,3689975-3690520,100.0,83.52,,,,,2017/4/11,38.0,,
GCF_002085835.1,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_002085835.1_AMRSEG0003,NZ_CP019888.1,positive,4268178-4271600,97.13,80.37,,,,,2017/4/11,38.0,,
GCF_002085835.1,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_002085835.1_AMRSEG0004,NZ_CP019888.1,positive,4664037-4664723,100.0,90.97,,,,,2017/4/11,38.0,,
GCF_002085835.1,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,GCF_002085835.1_AMRSEG0005,NZ_CP019888.1,positive,5464151-5465739,99.69,85.66,,,,,2017/4/11,38.0,,
GCF_002086895.1,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_002086895.1_AMRSEG0001,NZ_MWKY01000001.1,positive,377797-378104,89.28,87.01,,,,,2017/4/11,745.0,,
GCF_002086895.1,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,GCF_002086895.1_AMRSEG0002,NZ_MWKY01000001.1,negative,3620022-3620567,100.0,83.52,,,,,2017/4/11,745.0,,
GCF_002086895.1,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_002086895.1_AMRSEG0003,NZ_MWKY01000001.1,positive,4191974-4195396,97.13,80.37,,,,,2017/4/11,745.0,,
GCF_002086895.1,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_002086895.1_AMRSEG0004,NZ_MWKY01000001.1,positive,4587505-4588191,100.0,90.97,,,,,2017/4/11,745.0,,
GCF_002920655.1,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,GCF_002920655.1_AMRSEG0001,NZ_PQOL01000020.1,positive,15254-15799,100.0,83.33,,,,,2018/2/6,812.0,,
GCF_002920655.1,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_002920655.1_AMRSEG0002,NZ_PQOL01000068.1,positive,11339-12025,100.0,90.83,,,,,2018/2/6,812.0,,
GCF_002920655.1,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_002920655.1_AMRSEG0003,NZ_PQOL01000121.1,positive,2197-2504,89.28,86.69,,,,,2018/2/6,812.0,,
GCF_002920655.1,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_002920655.1_AMRSEG0004,NZ_PQOL01000133.1,positive,3702-7124,97.13,80.37,,,,,2018/2/6,812.0,,
GCF_002920655.1,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,GCF_002920655.1_AMRSEG0005,NZ_PQOL01000163.1,positive,8983-10571,99.69,85.66,,,,,2018/2/6,812.0,,
GCF_002920665.1,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_002920665.1_AMRSEG0001,NZ_PQOM01000001.1,negative,105000-108422,97.13,80.34,,,,,2018/2/6,635.0,,
GCF_002920665.1,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_002920665.1_AMRSEG0002,NZ_PQOM01000020.1,negative,13894-14201,89.28,87.01,,,,,2018/2/6,635.0,,
GCF_002920665.1,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,GCF_002920665.1_AMRSEG0003,NZ_PQOM01000043.1,negative,20659-21204,100.0,83.52,,,,,2018/2/6,635.0,,
GCF_002920665.1,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_002920665.1_AMRSEG0004,NZ_PQOM01000186.1,negative,8093-8779,100.0,90.97,,,,,2018/2/6,635.0,,
GCF_002920665.1,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,GCF_002920665.1_AMRSEG0005,NZ_PQOM01000216.1,positive,1346-2934,99.69,85.66,,,,,2018/2/6,635.0,,
GCF_002920675.1,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_002920675.1_AMRSEG0001,NZ_PQON01000004.1,negative,105017-108439,97.13,80.37,,,,,2018/2/6,38.0,,
GCF_002920675.1,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,GCF_002920675.1_AMRSEG0002,NZ_PQON01000019.1,positive,15267-15812,100.0,83.52,,,,,2018/2/6,38.0,,
GCF_002920675.1,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_002920675.1_AMRSEG0003,NZ_PQON01000070.1,positive,11356-12042,100.0,90.97,,,,,2018/2/6,38.0,,
GCF_002920675.1,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,GCF_002920675.1_AMRSEG0004,NZ_PQON01000138.1,positive,8045-9633,99.69,85.66,,,,,2018/2/6,38.0,,
GCF_002920675.1,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_002920675.1_AMRSEG0005,NZ_PQON01000157.1,negative,6947-7254,89.28,87.01,,,,,2018/2/6,38.0,,
GCF_002920705.1,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_002920705.1_AMRSEG0001,NZ_PQOO01000001.1,positive,89564-92986,97.13,80.37,,,,,2018/2/6,38.0,,
GCF_002920705.1,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,GCF_002920705.1_AMRSEG0002,NZ_PQOO01000023.1,negative,44530-45075,100.0,83.52,,,,,2018/2/6,38.0,,
GCF_002920705.1,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_002920705.1_AMRSEG0003,NZ_PQOO01000093.1,negative,21605-22291,100.0,90.97,,,,,2018/2/6,38.0,,
GCF_002920705.1,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_002920705.1_AMRSEG0004,NZ_PQOO01000113.1,negative,6947-7254,89.28,87.01,,,,,2018/2/6,38.0,,
GCF_002920705.1,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,GCF_002920705.1_AMRSEG0005,NZ_PQOO01000124.1,negative,4092-5680,99.69,85.66,,,,,2018/2/6,38.0,,
GCF_002920735.1,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_002920735.1_AMRSEG0001,NZ_PQOP01000001.1,negative,105006-108428,97.13,80.37,,,,,2018/2/6,38.0,,
GCF_002920735.1,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,GCF_002920735.1_AMRSEG0002,NZ_PQOP01000007.1,negative,87288-87833,100.0,83.52,,,,,2018/2/6,38.0,,
GCF_002920735.1,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_002920735.1_AMRSEG0003,NZ_PQOP01000070.1,positive,11330-12016,100.0,90.97,,,,,2018/2/6,38.0,,
GCF_002920735.1,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,GCF_002920735.1_AMRSEG0004,NZ_PQOP01000141.1,positive,8639-10227,99.69,85.66,,,,,2018/2/6,38.0,,
GCF_002920735.1,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_002920735.1_AMRSEG0005,NZ_PQOP01000160.1,positive,1529-1836,89.28,87.01,,,,,2018/2/6,38.0,,
GCF_002920755.1,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_002920755.1_AMRSEG0001,NZ_PQOQ01000001.1,negative,105042-108464,97.13,80.37,,,,,2018/2/6,38.0,,
GCF_002920755.1,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,GCF_002920755.1_AMRSEG0002,NZ_PQOQ01000022.1,positive,15321-15866,100.0,83.52,,,,,2018/2/6,38.0,,
GCF_002920755.1,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_002920755.1_AMRSEG0003,NZ_PQOQ01000033.1,positive,41289-41596,89.28,87.01,,,,,2018/2/6,38.0,,
GCF_002920755.1,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_002920755.1_AMRSEG0004,NZ_PQOQ01000121.1,negative,4913-5599,100.0,90.97,,,,,2018/2/6,38.0,,
GCF_002920755.1,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,GCF_002920755.1_AMRSEG0005,NZ_PQOQ01000138.1,positive,8958-10546,99.69,85.66,,,,,2018/2/6,38.0,,
GCF_002920775.1,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_002920775.1_AMRSEG0001,NZ_PQOS01000001.1,negative,195893-199315,97.13,80.37,,,,,2018/2/6,812.0,,
GCF_002920775.1,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,GCF_002920775.1_AMRSEG0002,NZ_PQOS01000029.1,negative,44506-45051,100.0,83.33,,,,,2018/2/6,812.0,,
GCF_002920775.1,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_002920775.1_AMRSEG0003,NZ_PQOS01000097.1,negative,21597-22283,100.0,90.83,,,,,2018/2/6,812.0,,
GCF_002920775.1,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_002920775.1_AMRSEG0004,NZ_PQOS01000111.1,positive,1765-2072,89.28,86.69,,,,,2018/2/6,812.0,,
GCF_002920775.1,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,GCF_002920775.1_AMRSEG0005,NZ_PQOS01000122.1,positive,8876-10464,99.69,85.66,,,,,2018/2/6,812.0,,
GCF_002920795.1,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_002920795.1_AMRSEG0001,NZ_PQOR01000001.1,positive,89774-93196,97.13,80.37,,,,,2018/2/6,38.0,,
GCF_002920795.1,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_002920795.1_AMRSEG0002,NZ_PQOR01000031.1,negative,8269-8576,89.28,87.01,,,,,2018/2/6,38.0,,
GCF_002920795.1,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,GCF_002920795.1_AMRSEG0003,NZ_PQOR01000035.1,negative,32421-32966,100.0,83.52,,,,,2018/2/6,38.0,,
GCF_002920795.1,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_002920795.1_AMRSEG0004,NZ_PQOR01000100.1,positive,586-1272,100.0,90.97,,,,,2018/2/6,38.0,,
GCF_002920795.1,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,GCF_002920795.1_AMRSEG0005,NZ_PQOR01000143.1,positive,8046-9634,99.69,85.66,,,,,2018/2/6,38.0,,
GCF_002920805.1,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_002920805.1_AMRSEG0001,NZ_PQOV01000001.1,positive,98843-102265,97.13,80.37,,,,,2018/2/6,814.0,,
GCF_002920805.1,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,GCF_002920805.1_AMRSEG0002,NZ_PQOV01000020.1,positive,15226-15771,100.0,83.52,,,,,2018/2/6,814.0,,
GCF_002920805.1,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_002920805.1_AMRSEG0003,NZ_PQOV01000068.1,positive,11339-12025,100.0,90.97,,,,,2018/2/6,814.0,,
GCF_002920805.1,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_002920805.1_AMRSEG0004,NZ_PQOV01000119.1,negative,15378-15685,89.28,87.01,,,,,2018/2/6,814.0,,
GCF_002920805.1,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,GCF_002920805.1_AMRSEG0005,NZ_PQOV01000167.1,positive,1326-2914,99.69,85.66,,,,,2018/2/6,814.0,,
GCF_002920815.1,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_002920815.1_AMRSEG0001,NZ_PQOT01000036.1,negative,21597-22283,100.0,90.83,,,,,2018/2/6,812.0,,
GCF_002920815.1,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,GCF_002920815.1_AMRSEG0002,NZ_PQOT01000046.1,negative,15091-15636,100.0,83.33,,,,,2018/2/6,812.0,,
GCF_002920815.1,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_002920815.1_AMRSEG0003,NZ_PQOT01000051.1,negative,5396-8818,97.13,80.37,,,,,2018/2/6,812.0,,
GCF_002920815.1,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,GCF_002920815.1_AMRSEG0004,NZ_PQOT01000171.1,positive,8466-10054,99.69,85.66,,,,,2018/2/6,812.0,,
GCF_002920815.1,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_002920815.1_AMRSEG0005,NZ_PQOT01000184.1,positive,4636-4943,89.28,86.69,,,,,2018/2/6,812.0,,
GCF_002920845.1,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_002920845.1_AMRSEG0001,NZ_PQOU01000001.1,positive,15899-19321,97.13,80.34,,,,,2018/2/6,812.0,,
GCF_002920845.1,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,GCF_002920845.1_AMRSEG0002,NZ_PQOU01000087.1,negative,8430-8975,100.0,83.52,,,,,2018/2/6,812.0,,
GCF_002920845.1,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_002920845.1_AMRSEG0003,NZ_PQOU01000094.1,positive,587-1273,100.0,90.97,,,,,2018/2/6,812.0,,
GCF_002920845.1,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_002920845.1_AMRSEG0004,NZ_PQOU01000134.1,positive,1511-1818,89.28,87.01,,,,,2018/2/6,812.0,,
GCF_002920845.1,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,GCF_002920845.1_AMRSEG0005,NZ_PQOU01000204.1,positive,1382-2970,99.69,85.66,,,,,2018/2/6,812.0,,
GCF_002920875.1,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_002920875.1_AMRSEG0001,NZ_PQOW01000001.1,positive,15893-19315,97.13,80.37,,,,,2018/2/6,814.0,,
GCF_002920875.1,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,GCF_002920875.1_AMRSEG0002,NZ_PQOW01000022.1,positive,15264-15809,100.0,83.52,,,,,2018/2/6,814.0,,
GCF_002920875.1,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_002920875.1_AMRSEG0003,NZ_PQOW01000099.1,negative,21852-22538,100.0,90.97,,,,,2018/2/6,814.0,,
GCF_002920875.1,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_002920875.1_AMRSEG0004,NZ_PQOW01000125.1,negative,15427-15734,89.28,87.01,,,,,2018/2/6,814.0,,
GCF_002920875.1,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,GCF_002920875.1_AMRSEG0005,NZ_PQOW01000140.1,positive,8063-9651,99.69,85.66,,,,,2018/2/6,814.0,,
GCF_900565985.1,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,GCF_900565985.1_AMRSEG0001,NZ_UPHH01000003.1,negative,44503-45048,100.0,83.52,,,,,2018/11/1,38.0,,
GCF_900565985.1,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_900565985.1_AMRSEG0002,NZ_UPHH01000009.1,positive,89846-93268,97.13,80.37,,,,,2018/11/1,38.0,,
GCF_900565985.1,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_900565985.1_AMRSEG0003,NZ_UPHH01000015.1,positive,11344-12030,100.0,90.97,,,,,2018/11/1,38.0,,
GCF_900565985.1,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,GCF_900565985.1_AMRSEG0004,NZ_UPHH01000025.1,positive,8981-10569,99.69,85.66,,,,,2018/11/1,38.0,,
GCF_900565985.1,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_900565985.1_AMRSEG0005,NZ_UPHH01000061.1,positive,77387-77694,89.28,87.01,,,,,2018/11/1,38.0,,
GCF_900565995.1,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,GCF_900565995.1_AMRSEG0001,NZ_UPHJ01000014.1,negative,32465-33010,100.0,83.52,,,,,2018/11/1,38.0,,
GCF_900565995.1,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_900565995.1_AMRSEG0002,NZ_UPHJ01000018.1,positive,89740-93162,97.13,80.37,,,,,2018/11/1,38.0,,
GCF_900565995.1,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_900565995.1_AMRSEG0003,NZ_UPHJ01000023.1,positive,11413-12099,100.0,90.97,,,,,2018/11/1,38.0,,
GCF_900565995.1,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,GCF_900565995.1_AMRSEG0004,NZ_UPHJ01000036.1,positive,9977-11565,99.69,85.66,,,,,2018/11/1,38.0,,
GCF_900565995.1,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_900565995.1_AMRSEG0005,NZ_UPHJ01000065.1,positive,90257-90564,89.28,87.01,,,,,2018/11/1,38.0,,
SRR12599230,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599230_AMRSEG0001,NODE_103_length_14586_cov_40.323349,positive,8912-10500,99.69,85.66,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599230,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599230_AMRSEG0002,NODE_1_length_290094_cov_41.809813,positive,89676-93098,97.13,80.37,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599230,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599230_AMRSEG0003,NODE_34_length_60615_cov_42.455526,negative,44511-45056,100.0,83.52,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599230,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599230_AMRSEG0004,NODE_59_length_33924_cov_41.371667,positive,11397-12083,100.0,90.97,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599230,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599230_AMRSEG0005,NODE_92_length_17542_cov_39.969850,negative,15464-15771,89.28,87.01,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599232,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599232_AMRSEG0001,NODE_106_length_15260_cov_67.353491,negative,4103-5691,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599232,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599232_AMRSEG0002,NODE_1_length_290144_cov_72.231180,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599232,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599232_AMRSEG0003,NODE_32_length_62119_cov_69.550422,negative,44516-45061,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599232,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599232_AMRSEG0004,NODE_64_length_34087_cov_71.621238,negative,22058-22744,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599232,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599232_AMRSEG0005,NODE_96_length_17489_cov_68.957764,negative,15411-15718,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599233,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599233_AMRSEG0001,NODE_1_length_285864_cov_69.462448,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599233,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599233_AMRSEG0002,NODE_33_length_61217_cov_66.527995,positive,16167-16712,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599233,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599233_AMRSEG0003,NODE_60_length_33908_cov_68.379642,positive,11344-12030,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599233,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599233_AMRSEG0004,NODE_86_length_18644_cov_64.262742,negative,7148-8736,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599233,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599233_AMRSEG0005,NODE_91_length_17441_cov_66.300322,negative,15363-15670,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599234,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599234_AMRSEG0001,NODE_102_length_16950_cov_68.485462,negative,14845-15152,89.28,87.34,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,743.0,,
SRR12599234,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599234_AMRSEG0002,NODE_20_length_81268_cov_78.036882,positive,65693-69118,97.16,80.0,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,743.0,,
SRR12599234,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599234_AMRSEG0003,NODE_31_length_57730_cov_75.081260,positive,8035-8578,99.63,82.72,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,743.0,,
SRR12599234,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599234_AMRSEG0004,NODE_3_length_214635_cov_79.120859,positive,1349-2035,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,743.0,,
SRR12599234,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599234_AMRSEG0005,NODE_5_length_158475_cov_69.656869,positive,75041-76633,100.0,85.62,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,743.0,,
SRR12599235,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599235_AMRSEG0001,NODE_2_length_285911_cov_63.487934,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599235,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599235_AMRSEG0002,NODE_30_length_60618_cov_62.079630,negative,44517-45062,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599235,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599235_AMRSEG0003,NODE_58_length_33876_cov_62.347884,negative,21849-22535,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599235,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599235_AMRSEG0004,NODE_86_length_17568_cov_61.319623,negative,15490-15797,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599235,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599235_AMRSEG0005,NODE_89_length_15592_cov_56.078370,negative,4101-5689,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599237,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599237_AMRSEG0001,NODE_2_length_290271_cov_59.608901,negative,197174-200596,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599237,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599237_AMRSEG0002,NODE_31_length_60632_cov_58.131437,negative,44516-45061,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599237,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599237_AMRSEG0003,NODE_57_length_34095_cov_60.537318,negative,22062-22748,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599237,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599237_AMRSEG0004,NODE_87_length_17479_cov_57.791169,negative,15401-15708,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599237,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599237_AMRSEG0005,NODE_89_length_15593_cov_55.992080,negative,4101-5689,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599238,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599238_AMRSEG0001,NODE_100_length_15606_cov_54.830084,positive,9919-11507,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599238,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599238_AMRSEG0002,NODE_2_length_290096_cov_60.165571,negative,196999-200421,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599238,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599238_AMRSEG0003,NODE_34_length_62166_cov_57.052284,negative,44531-45076,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599238,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599238_AMRSEG0004,NODE_64_length_33875_cov_59.901633,positive,11348-12034,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599238,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599238_AMRSEG0005,NODE_96_length_17491_cov_58.492254,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599239,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599239_AMRSEG0001,NODE_102_length_14596_cov_54.248469,negative,4103-5691,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599239,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599239_AMRSEG0002,NODE_1_length_285933_cov_58.487879,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599239,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599239_AMRSEG0003,NODE_31_length_60942_cov_56.593324,positive,15898-16443,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599239,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599239_AMRSEG0004,NODE_61_length_33878_cov_56.694692,positive,11342-12028,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599239,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599239_AMRSEG0005,NODE_91_length_17473_cov_56.893682,negative,15395-15702,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599241,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599241_AMRSEG0001,NODE_2_length_285731_cov_55.500189,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599241,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599241_AMRSEG0002,NODE_32_length_60647_cov_55.592879,positive,15586-16131,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599241,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599241_AMRSEG0003,NODE_61_length_33885_cov_54.748211,positive,11351-12037,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599241,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599241_AMRSEG0004,NODE_88_length_17490_cov_54.360418,negative,15412-15719,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599241,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599241_AMRSEG0005,NODE_95_length_14651_cov_51.795380,positive,8963-10551,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599242,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599242_AMRSEG0001,NODE_19_length_88994_cov_50.212491,positive,66226-66912,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599242,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599242_AMRSEG0002,NODE_1_length_290018_cov_52.503064,negative,196921-200343,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599242,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599242_AMRSEG0003,NODE_36_length_60605_cov_51.471144,negative,44501-45046,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599242,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599242_AMRSEG0004,NODE_89_length_18697_cov_50.172427,positive,9911-11499,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599242,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599242_AMRSEG0005,NODE_91_length_17686_cov_50.504511,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599243,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599243_AMRSEG0001,NODE_1_length_285786_cov_63.567893,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599243,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599243_AMRSEG0002,NODE_32_length_60768_cov_63.120254,negative,44506-45051,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599243,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599243_AMRSEG0003,NODE_58_length_33901_cov_63.605532,positive,11374-12060,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599243,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599243_AMRSEG0004,NODE_85_length_17598_cov_59.682121,positive,8865-10453,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599243,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599243_AMRSEG0005,NODE_86_length_17463_cov_61.310575,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599245,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599245_AMRSEG0001,NODE_1_length_285841_cov_72.248966,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599245,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599245_AMRSEG0002,NODE_33_length_60652_cov_69.746835,negative,44538-45083,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599245,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599245_AMRSEG0003,NODE_59_length_33850_cov_70.901145,negative,21837-22523,100.0,90.83,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599245,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599245_AMRSEG0004,NODE_87_length_17189_cov_69.012612,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599245,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599245_AMRSEG0005,NODE_93_length_14625_cov_67.811015,negative,4114-5702,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599247,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599247_AMRSEG0001,NODE_33_length_60702_cov_58.090750,positive,15648-16193,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599247,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599247_AMRSEG0002,NODE_3_length_198138_cov_61.254227,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599247,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599247_AMRSEG0003,NODE_64_length_33917_cov_58.643676,positive,11329-12015,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599247,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599247_AMRSEG0004,NODE_93_length_17463_cov_57.887356,negative,15385-15692,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599247,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599247_AMRSEG0005,NODE_96_length_15600_cov_54.081032,positive,9910-11498,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599248,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599248_AMRSEG0001,NODE_110_length_14656_cov_44.154389,negative,4100-5688,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Japan,,38.0,,
SRR12599248,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599248_AMRSEG0002,NODE_1_length_276330_cov_49.229173,negative,183233-186655,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Japan,,38.0,,
SRR12599248,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599248_AMRSEG0003,NODE_32_length_60678_cov_48.913421,negative,44562-45107,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Japan,,38.0,,
SRR12599248,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599248_AMRSEG0004,NODE_62_length_33888_cov_46.730259,positive,11324-12010,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Japan,,38.0,,
SRR12599248,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599248_AMRSEG0005,NODE_99_length_17381_cov_46.075471,negative,15303-15610,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Japan,,38.0,,
SRR12599250,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599250_AMRSEG0001,NODE_123_length_10087_cov_54.659417,negative,7982-8289,89.28,87.34,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,743.0,,
SRR12599250,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599250_AMRSEG0002,NODE_15_length_91209_cov_58.704090,negative,81709-83301,100.0,85.69,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,743.0,,
SRR12599250,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599250_AMRSEG0003,NODE_20_length_81306_cov_63.057605,negative,12195-15620,97.16,80.0,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,743.0,,
SRR12599250,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599250_AMRSEG0004,NODE_35_length_57722_cov_62.042699,negative,49202-49745,99.63,82.72,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,743.0,,
SRR12599250,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599250_AMRSEG0005,NODE_4_length_181469_cov_61.233333,positive,1380-2066,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,743.0,,
SRR12599252,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599252_AMRSEG0001,NODE_1_length_285792_cov_46.240952,negative,192695-196117,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Japan,,38.0,,
SRR12599252,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599252_AMRSEG0002,NODE_33_length_60650_cov_45.326869,negative,44500-45045,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Japan,,38.0,,
SRR12599252,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599252_AMRSEG0003,NODE_65_length_33908_cov_45.679244,negative,21879-22565,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Japan,,38.0,,
SRR12599252,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599252_AMRSEG0004,NODE_95_length_17395_cov_45.344565,negative,15317-15624,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Japan,,38.0,,
SRR12599252,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599252_AMRSEG0005,NODE_98_length_15651_cov_40.948871,negative,4099-5687,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Japan,,38.0,,
SRR12599253,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599253_AMRSEG0001,NODE_2_length_285818_cov_69.582775,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599253,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599253_AMRSEG0002,NODE_31_length_61041_cov_68.111007,positive,15987-16532,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599253,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599253_AMRSEG0003,NODE_62_length_34078_cov_68.144877,positive,11348-12034,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599253,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599253_AMRSEG0004,NODE_88_length_17453_cov_65.080564,negative,15375-15682,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599253,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599253_AMRSEG0005,NODE_97_length_14607_cov_65.966378,negative,4125-5713,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599255,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599255_AMRSEG0001,NODE_1_length_290388_cov_48.624001,negative,197291-200713,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Japan,,38.0,,
SRR12599255,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599255_AMRSEG0002,NODE_34_length_60622_cov_48.684820,positive,15572-16117,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Japan,,38.0,,
SRR12599255,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599255_AMRSEG0003,NODE_59_length_33872_cov_47.637789,positive,11340-12026,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Japan,,38.0,,
SRR12599255,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599255_AMRSEG0004,NODE_90_length_17491_cov_48.727507,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Japan,,38.0,,
SRR12599255,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599255_AMRSEG0005,NODE_91_length_15597_cov_42.771212,negative,4099-5687,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Japan,,38.0,,
SRR12599256,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599256_AMRSEG0001,NODE_17_length_94498_cov_56.294764,positive,15646-16191,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599256,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599256_AMRSEG0002,NODE_1_length_285775_cov_59.815783,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599256,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599256_AMRSEG0003,NODE_65_length_33913_cov_58.190812,positive,11380-12066,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599256,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599256_AMRSEG0004,NODE_94_length_17479_cov_55.314711,negative,15401-15708,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599256,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599256_AMRSEG0005,NODE_97_length_15590_cov_54.208604,positive,9900-11488,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599257,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599257_AMRSEG0001,NODE_1_length_285826_cov_56.442181,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599257,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599257_AMRSEG0002,NODE_33_length_60744_cov_55.988201,positive,15684-16229,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599257,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599257_AMRSEG0003,NODE_67_length_34103_cov_55.795270,positive,11368-12054,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599257,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599257_AMRSEG0004,NODE_97_length_17542_cov_54.036444,negative,15464-15771,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599257,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599257_AMRSEG0005,NODE_99_length_15679_cov_50.632877,negative,4102-5690,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599258,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599258_AMRSEG0001,NODE_1_length_285817_cov_60.653251,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599258,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599258_AMRSEG0002,NODE_32_length_60650_cov_58.581857,positive,15572-16117,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599258,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599258_AMRSEG0003,NODE_55_length_39071_cov_59.273841,negative,36993-37300,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599258,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599258_AMRSEG0004,NODE_63_length_33965_cov_60.170668,positive,11428-12114,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599258,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599258_AMRSEG0005,NODE_87_length_15595_cov_55.123680,positive,9905-11493,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599259,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599259_AMRSEG0001,NODE_2_length_290110_cov_61.823584,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599259,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599259_AMRSEG0002,NODE_31_length_60674_cov_61.697976,negative,44500-45045,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599259,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599259_AMRSEG0003,NODE_60_length_33503_cov_61.754187,negative,21879-22565,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599259,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599259_AMRSEG0004,NODE_88_length_17414_cov_57.836494,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599259,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599259_AMRSEG0005,NODE_91_length_15588_cov_55.204767,positive,9898-11486,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599260,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599260_AMRSEG0001,NODE_1_length_285774_cov_62.261922,negative,192677-196099,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599260,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599260_AMRSEG0002,NODE_31_length_61051_cov_60.349249,positive,16012-16557,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599260,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599260_AMRSEG0003,NODE_63_length_33859_cov_61.064445,positive,11330-12016,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599260,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599260_AMRSEG0004,NODE_89_length_17544_cov_58.726961,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599260,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599260_AMRSEG0005,NODE_98_length_14550_cov_58.779734,positive,8878-10466,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599263,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599263_AMRSEG0001,NODE_1_length_285775_cov_66.075534,negative,192678-196100,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599263,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599263_AMRSEG0002,NODE_30_length_76589_cov_61.889319,negative,22000-22686,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599263,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599263_AMRSEG0003,NODE_34_length_60709_cov_65.194160,negative,44517-45062,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599263,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599263_AMRSEG0004,NODE_88_length_17383_cov_61.357737,negative,15305-15612,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599263,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599263_AMRSEG0005,NODE_91_length_15577_cov_57.559559,positive,9904-11492,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599264,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599264_AMRSEG0001,NODE_2_length_285874_cov_48.626354,negative,192777-196199,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599264,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599264_AMRSEG0002,NODE_54_length_37446_cov_49.121499,positive,16161-16706,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599264,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599264_AMRSEG0003,NODE_57_length_34092_cov_47.187370,positive,11351-12037,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599264,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599264_AMRSEG0004,NODE_95_length_17490_cov_47.370230,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599264,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599264_AMRSEG0005,NODE_9_length_133409_cov_44.636157,positive,127719-129307,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599265,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599265_AMRSEG0001,NODE_108_length_14788_cov_42.063701,positive,9115-10703,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599265,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599265_AMRSEG0002,NODE_1_length_285865_cov_45.469689,negative,192768-196190,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599265,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599265_AMRSEG0003,NODE_32_length_60188_cov_45.018644,positive,16063-16608,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599265,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599265_AMRSEG0004,NODE_65_length_33858_cov_43.999349,negative,21843-22529,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599265,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599265_AMRSEG0005,NODE_99_length_17414_cov_42.529364,negative,15336-15643,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599266,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599266_AMRSEG0001,NODE_103_length_14586_cov_56.221098,negative,4095-5683,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599266,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599266_AMRSEG0002,NODE_1_length_285794_cov_59.864974,negative,192697-196119,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599266,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599266_AMRSEG0003,NODE_36_length_60637_cov_58.502707,positive,15582-16127,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599266,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599266_AMRSEG0004,NODE_66_length_33879_cov_59.517329,negative,21842-22528,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599266,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599266_AMRSEG0005,NODE_92_length_17560_cov_55.911756,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599267,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599267_AMRSEG0001,NODE_126_length_10087_cov_40.407721,positive,1799-2106,89.28,87.34,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,743.0,,
SRR12599267,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599267_AMRSEG0002,NODE_1_length_371311_cov_46.002696,negative,369259-369945,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,743.0,,
SRR12599267,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599267_AMRSEG0003,NODE_21_length_81324_cov_47.037632,positive,65680-69105,97.16,80.03,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,743.0,,
SRR12599267,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599267_AMRSEG0004,NODE_27_length_72214_cov_44.538066,positive,7909-9501,100.0,85.69,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,743.0,,
SRR12599267,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599267_AMRSEG0005,NODE_34_length_57709_cov_46.830396,negative,49209-49752,99.63,82.72,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,743.0,,
SRR12599268,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599268_AMRSEG0001,NODE_104_length_15867_cov_59.491205,negative,13789-14096,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599268,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599268_AMRSEG0002,NODE_110_length_14708_cov_59.095118,positive,9053-10641,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599268,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599268_AMRSEG0003,NODE_17_length_89417_cov_61.132339,positive,66914-67600,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599268,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599268_AMRSEG0004,NODE_1_length_285876_cov_63.850528,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599268,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599268_AMRSEG0005,NODE_30_length_61292_cov_62.642506,positive,16160-16705,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599269,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599269_AMRSEG0001,NODE_19_length_89482_cov_55.047417,positive,66914-67600,100.0,90.97,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599269,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599269_AMRSEG0002,NODE_1_length_285937_cov_58.186033,negative,192840-196262,97.13,80.37,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599269,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599269_AMRSEG0003,NODE_37_length_61074_cov_57.552261,negative,44511-45056,100.0,83.52,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599269,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599269_AMRSEG0004,NODE_89_length_17489_cov_54.042867,positive,1772-2079,89.28,87.01,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599269,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599269_AMRSEG0005,NODE_98_length_13764_cov_57.929202,positive,8084-9672,99.69,85.66,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599270,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599270_AMRSEG0001,NODE_2_length_285766_cov_65.832452,negative,192669-196091,97.13,80.37,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599270,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599270_AMRSEG0002,NODE_33_length_61110_cov_64.225384,positive,16066-16611,100.0,83.52,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599270,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599270_AMRSEG0003,NODE_56_length_33875_cov_64.303147,positive,11348-12034,100.0,90.97,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599270,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599270_AMRSEG0004,NODE_84_length_17463_cov_59.960402,negative,15385-15692,89.28,87.01,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599270,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599270_AMRSEG0005,NODE_93_length_14307_cov_63.136900,positive,8612-10200,99.69,85.66,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599271,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599271_AMRSEG0001,NODE_105_length_15600_cov_37.339898,negative,4093-5681,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599271,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599271_AMRSEG0002,NODE_1_length_290793_cov_40.577622,negative,197696-201118,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599271,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599271_AMRSEG0003,NODE_31_length_60516_cov_41.309282,positive,15466-16011,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599271,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599271_AMRSEG0004,NODE_65_length_33853_cov_40.567801,positive,11324-12010,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599271,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599271_AMRSEG0005,NODE_99_length_17490_cov_40.386412,negative,15412-15719,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599272,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599272_AMRSEG0001,NODE_2_length_285819_cov_80.320567,negative,192722-196144,97.13,80.37,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599272,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599272_AMRSEG0002,NODE_31_length_61018_cov_78.842146,positive,15968-16513,100.0,83.52,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599272,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599272_AMRSEG0003,NODE_58_length_33918_cov_80.593236,positive,11397-12083,100.0,90.97,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599272,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599272_AMRSEG0004,NODE_82_length_17452_cov_75.767727,positive,1772-2079,89.28,87.01,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599272,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599272_AMRSEG0005,NODE_84_length_15581_cov_73.149762,positive,9899-11487,99.69,85.66,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599274,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599274_AMRSEG0001,NODE_1_length_290206_cov_68.402188,positive,89676-93098,97.13,80.37,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599274,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599274_AMRSEG0002,NODE_35_length_60646_cov_67.037981,positive,15601-16146,100.0,83.52,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599274,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599274_AMRSEG0003,NODE_62_length_33869_cov_69.489321,negative,21842-22528,100.0,90.97,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599274,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599274_AMRSEG0004,NODE_89_length_17463_cov_65.262816,positive,1772-2079,89.28,87.01,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599274,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599274_AMRSEG0005,NODE_95_length_15595_cov_61.152975,negative,4108-5696,99.69,85.66,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599275,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599275_AMRSEG0001,NODE_1_length_285821_cov_64.321594,negative,192724-196146,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599275,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599275_AMRSEG0002,NODE_33_length_60695_cov_64.294135,positive,15648-16193,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599275,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599275_AMRSEG0003,NODE_59_length_33864_cov_62.214846,positive,11342-12028,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599275,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599275_AMRSEG0004,NODE_89_length_17473_cov_59.942619,negative,15395-15702,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599275,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599275_AMRSEG0005,NODE_97_length_14545_cov_61.244027,positive,8867-10455,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599276,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599276_AMRSEG0001,NODE_1_length_285736_cov_82.121811,positive,89676-93098,97.13,80.37,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599276,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599276_AMRSEG0002,NODE_22_length_89436_cov_79.323039,positive,66914-67600,100.0,90.97,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599276,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599276_AMRSEG0003,NODE_33_length_60626_cov_81.408385,positive,15571-16116,100.0,83.52,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599276,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599276_AMRSEG0004,NODE_85_length_17568_cov_73.584519,positive,1772-2079,89.28,87.01,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599276,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599276_AMRSEG0005,NODE_91_length_15640_cov_73.636836,positive,9954-11542,99.69,85.66,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599277,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599277_AMRSEG0001,NODE_109_length_14644_cov_42.281599,positive,8954-10542,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599277,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599277_AMRSEG0002,NODE_1_length_266831_cov_44.144882,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599277,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599277_AMRSEG0003,NODE_35_length_60593_cov_43.082835,negative,44511-45056,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599277,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599277_AMRSEG0004,NODE_64_length_34123_cov_43.522959,positive,11387-12073,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599277,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599277_AMRSEG0005,NODE_99_length_17387_cov_42.259467,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599278,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599278_AMRSEG0001,NODE_2_length_285823_cov_78.303884,negative,192726-196148,97.13,80.37,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599278,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599278_AMRSEG0002,NODE_33_length_60628_cov_78.188161,positive,15581-16126,100.0,83.52,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599278,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599278_AMRSEG0003,NODE_66_length_33902_cov_76.471291,positive,11375-12061,100.0,90.97,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599278,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599278_AMRSEG0004,NODE_91_length_17450_cov_73.565077,positive,1772-2079,89.28,87.01,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599278,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599278_AMRSEG0005,NODE_93_length_15594_cov_70.580323,positive,9899-11487,99.69,85.66,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599279,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599279_AMRSEG0001,NODE_1_length_285738_cov_70.123290,positive,89676-93098,97.13,80.37,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599279,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599279_AMRSEG0002,NODE_34_length_60620_cov_69.091897,negative,44506-45051,100.0,83.52,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599279,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599279_AMRSEG0003,NODE_60_length_33853_cov_68.637112,positive,11342-12028,100.0,90.97,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599279,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599279_AMRSEG0004,NODE_92_length_17463_cov_64.494138,negative,15385-15692,89.28,87.01,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599279,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599279_AMRSEG0005,NODE_94_length_15635_cov_64.230863,positive,9949-11537,99.69,85.66,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599280,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599280_AMRSEG0001,NODE_1_length_285827_cov_77.611127,negative,192730-196152,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599280,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599280_AMRSEG0002,NODE_31_length_60661_cov_76.670666,negative,44536-45081,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599280,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599280_AMRSEG0003,NODE_58_length_33869_cov_77.382092,positive,11342-12028,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599280,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599280_AMRSEG0004,NODE_83_length_17397_cov_72.119130,negative,15319-15626,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599280,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599280_AMRSEG0005,NODE_90_length_14649_cov_73.556561,negative,4100-5688,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599281,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599281_AMRSEG0001,NODE_1_length_285895_cov_46.278086,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599281,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599281_AMRSEG0002,NODE_35_length_61149_cov_44.211882,positive,16042-16587,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599281,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599281_AMRSEG0003,NODE_65_length_33880_cov_46.046308,positive,11344-12030,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599281,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599281_AMRSEG0004,NODE_92_length_17544_cov_46.809393,negative,15466-15773,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599281,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599281_AMRSEG0005,NODE_95_length_15601_cov_40.572210,positive,9921-11509,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599282,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599282_AMRSEG0001,NODE_11_length_132936_cov_60.361496,positive,127250-128838,99.69,85.66,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599282,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599282_AMRSEG0002,NODE_1_length_285735_cov_65.572440,positive,89676-93098,97.13,80.37,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599282,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599282_AMRSEG0003,NODE_31_length_60637_cov_63.955988,positive,15590-16135,100.0,83.52,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599282,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599282_AMRSEG0004,NODE_60_length_33859_cov_65.109451,negative,21844-22530,100.0,90.97,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599282,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599282_AMRSEG0005,NODE_90_length_17453_cov_61.398505,negative,15375-15682,89.28,87.01,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599283,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599283_AMRSEG0001,NODE_10_length_133295_cov_57.111422,positive,127609-129197,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599283,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599283_AMRSEG0002,NODE_1_length_285777_cov_61.254811,negative,192680-196102,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599283,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599283_AMRSEG0003,NODE_32_length_60599_cov_61.545989,positive,15565-16110,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599283,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599283_AMRSEG0004,NODE_57_length_33869_cov_60.386352,positive,11347-12033,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599283,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599283_AMRSEG0005,NODE_91_length_17443_cov_57.857135,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599285,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599285_AMRSEG0001,NODE_10_length_132928_cov_65.144756,positive,127241-128829,99.69,85.66,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599285,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599285_AMRSEG0002,NODE_17_length_103464_cov_66.529308,positive,15648-16193,100.0,83.52,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599285,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599285_AMRSEG0003,NODE_2_length_285730_cov_69.803905,positive,89676-93098,97.13,80.37,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599285,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599285_AMRSEG0004,NODE_59_length_33964_cov_67.919648,negative,21903-22589,100.0,90.97,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599285,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599285_AMRSEG0005,NODE_88_length_17457_cov_64.703921,positive,1772-2079,89.28,87.01,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599286,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599286_AMRSEG0001,NODE_101_length_14591_cov_39.736096,positive,8918-10506,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599286,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599286_AMRSEG0002,NODE_2_length_285877_cov_43.345994,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599286,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599286_AMRSEG0003,NODE_33_length_61242_cov_41.824646,positive,16167-16712,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599286,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599286_AMRSEG0004,NODE_60_length_34130_cov_42.888250,positive,11388-12074,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599286,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599286_AMRSEG0005,NODE_92_length_17489_cov_42.206703,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599287,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599287_AMRSEG0001,NODE_13_length_131834_cov_62.164353,negative,115134-115679,100.0,83.52,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599287,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599287_AMRSEG0002,NODE_1_length_290098_cov_63.724416,positive,89676-93098,97.13,80.37,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599287,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599287_AMRSEG0003,NODE_61_length_33918_cov_63.392556,positive,11354-12040,100.0,90.97,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599287,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599287_AMRSEG0004,NODE_85_length_17589_cov_59.510727,negative,7152-8740,99.69,85.66,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599287,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599287_AMRSEG0005,NODE_86_length_17542_cov_59.892900,negative,15464-15771,89.28,87.01,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599288,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599288_AMRSEG0001,NODE_1_length_285825_cov_83.215938,negative,192680-196102,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,38.0,,
SRR12599288,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599288_AMRSEG0002,NODE_34_length_60624_cov_82.124238,negative,44506-45051,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,38.0,,
SRR12599288,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599288_AMRSEG0003,NODE_62_length_33923_cov_81.670201,negative,21844-22530,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,38.0,,
SRR12599288,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599288_AMRSEG0004,NODE_95_length_17647_cov_77.734929,positive,1895-2202,89.28,86.36,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,38.0,,
SRR12599288,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599288_AMRSEG0005,NODE_99_length_15586_cov_76.111770,positive,9900-11488,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,38.0,,
SRR12599289,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599289_AMRSEG0001,NODE_1_length_290222_cov_69.881134,negative,197125-200547,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,,,
SRR12599289,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599289_AMRSEG0002,NODE_22_length_85081_cov_64.824167,positive,1517-1824,89.28,87.99,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,,,
SRR12599289,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599289_AMRSEG0003,NODE_35_length_60907_cov_70.054862,positive,15868-16413,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,,,
SRR12599289,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599289_AMRSEG0004,NODE_66_length_33851_cov_67.853498,positive,11324-12010,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,,,
SRR12599289,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599289_AMRSEG0005,NODE_93_length_15595_cov_63.578805,negative,4099-5687,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,,,
SRR12599290,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599290_AMRSEG0001,NODE_2_length_285779_cov_69.754273,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,38.0,,
SRR12599290,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599290_AMRSEG0002,NODE_31_length_60688_cov_68.368412,positive,15636-16181,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,38.0,,
SRR12599290,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599290_AMRSEG0003,NODE_60_length_33856_cov_69.273725,positive,11329-12015,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,38.0,,
SRR12599290,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599290_AMRSEG0004,NODE_89_length_17653_cov_63.650540,positive,8902-10490,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,38.0,,
SRR12599290,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599290_AMRSEG0005,NODE_91_length_17464_cov_63.779323,negative,15386-15693,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,38.0,,
SRR12599291,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599291_AMRSEG0001,NODE_101_length_17486_cov_70.841244,negative,15285-15592,89.28,86.36,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,38.0,,
SRR12599291,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599291_AMRSEG0002,NODE_109_length_14698_cov_70.669218,positive,9001-10589,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,38.0,,
SRR12599291,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599291_AMRSEG0003,NODE_2_length_290054_cov_75.377946,positive,89636-93058,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,38.0,,
SRR12599291,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599291_AMRSEG0004,NODE_33_length_61046_cov_74.483135,negative,44491-45036,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,38.0,,
SRR12599291,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599291_AMRSEG0005,NODE_63_length_33913_cov_74.495391,negative,21842-22528,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,38.0,,
SRR12599292,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599292_AMRSEG0001,NODE_102_length_14557_cov_44.480130,negative,4093-5681,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599292,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599292_AMRSEG0002,NODE_1_length_285937_cov_49.943573,negative,192840-196262,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599292,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599292_AMRSEG0003,NODE_30_length_60971_cov_50.480922,positive,16005-16550,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599292,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599292_AMRSEG0004,NODE_61_length_33872_cov_49.427993,negative,21843-22529,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599292,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599292_AMRSEG0005,NODE_93_length_17469_cov_46.044238,negative,15391-15698,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599293,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599293_AMRSEG0001,NODE_100_length_17452_cov_48.596469,negative,15374-15681,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,38.0,,
SRR12599293,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599293_AMRSEG0002,NODE_103_length_15638_cov_45.708636,positive,9950-11538,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,38.0,,
SRR12599293,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599293_AMRSEG0003,NODE_1_length_285777_cov_52.157287,negative,192680-196102,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,38.0,,
SRR12599293,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599293_AMRSEG0004,NODE_31_length_60636_cov_51.680518,positive,15602-16147,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,38.0,,
SRR12599293,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599293_AMRSEG0005,NODE_62_length_33862_cov_51.330306,positive,11329-12015,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United States of America,,38.0,,
SRR12599294,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599294_AMRSEG0001,NODE_1_length_290490_cov_61.639534,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599294,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599294_AMRSEG0002,NODE_34_length_60614_cov_60.138247,positive,15572-16117,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599294,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599294_AMRSEG0003,NODE_61_length_33901_cov_60.868225,positive,11374-12060,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599294,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599294_AMRSEG0004,NODE_89_length_17360_cov_58.153553,negative,15282-15589,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599294,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599294_AMRSEG0005,NODE_90_length_15636_cov_56.421948,positive,9948-11536,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599298,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599298_AMRSEG0001,NODE_1_length_285804_cov_47.152918,negative,192707-196129,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United Kingdom,,38.0,,
SRR12599298,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599298_AMRSEG0002,NODE_32_length_61093_cov_46.272767,negative,44510-45055,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United Kingdom,,38.0,,
SRR12599298,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599298_AMRSEG0003,NODE_60_length_34078_cov_46.797677,negative,22040-22726,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United Kingdom,,38.0,,
SRR12599298,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599298_AMRSEG0004,NODE_92_length_17476_cov_44.036237,negative,15398-15705,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United Kingdom,,38.0,,
SRR12599298,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599298_AMRSEG0005,NODE_99_length_14547_cov_44.638083,positive,8871-10459,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United Kingdom,,38.0,,
SRR12599299,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599299_AMRSEG0001,NODE_1_length_282748_cov_50.275561,negative,189651-193073,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United Kingdom,,38.0,,
SRR12599299,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599299_AMRSEG0002,NODE_32_length_60474_cov_49.124001,negative,44370-44915,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United Kingdom,,38.0,,
SRR12599299,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599299_AMRSEG0003,NODE_63_length_33877_cov_49.861448,positive,11349-12035,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United Kingdom,,38.0,,
SRR12599299,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599299_AMRSEG0004,NODE_93_length_17344_cov_48.811180,negative,15266-15573,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United Kingdom,,38.0,,
SRR12599299,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599299_AMRSEG0005,NODE_97_length_15657_cov_43.635244,negative,4103-5691,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United Kingdom,,38.0,,
SRR12599300,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599300_AMRSEG0001,NODE_100_length_14670_cov_56.697474,negative,4108-5696,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United Kingdom,,38.0,,
SRR12599300,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599300_AMRSEG0002,NODE_13_length_103000_cov_70.898695,negative,86883-87428,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United Kingdom,,38.0,,
SRR12599300,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599300_AMRSEG0003,NODE_2_length_285813_cov_61.728087,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United Kingdom,,38.0,,
SRR12599300,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599300_AMRSEG0004,NODE_61_length_33865_cov_60.658985,positive,11348-12034,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United Kingdom,,38.0,,
SRR12599300,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599300_AMRSEG0005,NODE_91_length_17486_cov_57.823739,negative,15408-15715,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United Kingdom,,38.0,,
SRR12599301,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599301_AMRSEG0001,NODE_30_length_60619_cov_57.321256,positive,15565-16110,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United Kingdom,,38.0,,
SRR12599301,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599301_AMRSEG0002,NODE_3_length_285809_cov_57.450092,negative,192712-196134,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United Kingdom,,38.0,,
SRR12599301,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599301_AMRSEG0003,NODE_46_length_45134_cov_51.342881,negative,4087-5675,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United Kingdom,,38.0,,
SRR12599301,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599301_AMRSEG0004,NODE_61_length_33921_cov_57.319511,negative,21842-22528,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United Kingdom,,38.0,,
SRR12599301,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599301_AMRSEG0005,NODE_94_length_17490_cov_53.273656,negative,15412-15719,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,United Kingdom,,38.0,,
SRR12599302,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599302_AMRSEG0001,NODE_1_length_285775_cov_56.812395,positive,89676-93098,97.13,80.37,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599302,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599302_AMRSEG0002,NODE_32_length_60614_cov_56.618041,negative,44510-45055,100.0,83.52,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599302,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599302_AMRSEG0003,NODE_58_length_33860_cov_56.126106,positive,11338-12024,100.0,90.97,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599302,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599302_AMRSEG0004,NODE_90_length_17189_cov_54.096987,positive,1772-2079,89.28,87.01,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599302,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599302_AMRSEG0005,NODE_93_length_15599_cov_50.538427,positive,9911-11499,99.69,85.66,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599303,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599303_AMRSEG0001,NODE_32_length_60625_cov_57.321406,negative,44516-45061,100.0,83.52,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599303,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599303_AMRSEG0002,NODE_3_length_290151_cov_57.432221,positive,89676-93098,97.13,80.37,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599303,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599303_AMRSEG0003,NODE_59_length_33681_cov_57.103724,positive,11187-11873,100.0,90.97,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599303,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599303_AMRSEG0004,NODE_86_length_17471_cov_53.020278,positive,1772-2079,89.28,87.01,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599303,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599303_AMRSEG0005,NODE_89_length_15607_cov_50.754954,positive,9915-11503,99.69,85.66,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599304,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599304_AMRSEG0001,NODE_1_length_285942_cov_70.310757,negative,192845-196267,97.13,80.37,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599304,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599304_AMRSEG0002,NODE_34_length_61029_cov_68.940967,positive,16004-16549,100.0,83.52,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599304,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599304_AMRSEG0003,NODE_60_length_33899_cov_69.224347,positive,11329-12015,100.0,90.97,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599304,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599304_AMRSEG0004,NODE_90_length_17489_cov_65.759325,negative,15411-15718,89.28,87.01,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599304,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599304_AMRSEG0005,NODE_96_length_15677_cov_62.188100,positive,10002-11590,99.69,85.66,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599305,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599305_AMRSEG0001,NODE_2_length_286044_cov_71.264546,positive,89676-93098,97.13,80.37,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599305,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599305_AMRSEG0002,NODE_33_length_61250_cov_70.294654,negative,44516-45061,100.0,83.52,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599305,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599305_AMRSEG0003,NODE_58_length_33940_cov_70.721670,positive,11413-12099,100.0,90.97,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599305,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599305_AMRSEG0004,NODE_82_length_17504_cov_61.738031,positive,1772-2079,89.28,87.01,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599305,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599305_AMRSEG0005,NODE_92_length_14628_cov_65.798764,negative,4093-5681,99.69,85.66,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599308,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599308_AMRSEG0001,NODE_112_length_14565_cov_48.899600,positive,8885-10473,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Belgium,,38.0,,
SRR12599308,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599308_AMRSEG0002,NODE_1_length_290112_cov_51.716207,negative,197114-200536,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Belgium,,38.0,,
SRR12599308,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599308_AMRSEG0003,NODE_31_length_60615_cov_51.396106,negative,44511-45056,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Belgium,,38.0,,
SRR12599308,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599308_AMRSEG0004,NODE_65_length_33860_cov_50.427582,positive,11324-12010,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Belgium,,38.0,,
SRR12599308,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599308_AMRSEG0005,NODE_99_length_17460_cov_50.219406,negative,15382-15689,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Belgium,,38.0,,
SRR12599309,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599309_AMRSEG0001,NODE_100_length_14545_cov_52.320398,positive,8859-10447,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Belgium,,38.0,,
SRR12599309,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599309_AMRSEG0002,NODE_2_length_286031_cov_57.742968,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Belgium,,38.0,,
SRR12599309,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599309_AMRSEG0003,NODE_30_length_60618_cov_56.777310,negative,44512-45057,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Belgium,,38.0,,
SRR12599309,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599309_AMRSEG0004,NODE_58_length_33948_cov_57.787428,negative,21879-22565,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Belgium,,38.0,,
SRR12599309,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599309_AMRSEG0005,NODE_91_length_17441_cov_54.932328,negative,15363-15670,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Belgium,,38.0,,
SRR12599310,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599310_AMRSEG0001,NODE_104_length_17388_cov_51.682597,negative,15310-15617,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Belgium,,38.0,,
SRR12599310,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599310_AMRSEG0002,NODE_113_length_14661_cov_50.319907,negative,4099-5687,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Belgium,,38.0,,
SRR12599310,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599310_AMRSEG0003,NODE_13_length_103303_cov_52.440972,negative,87268-87813,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Belgium,,38.0,,
SRR12599310,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599310_AMRSEG0004,NODE_1_length_286002_cov_53.492224,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Belgium,,38.0,,
SRR12599310,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599310_AMRSEG0005,NODE_66_length_33889_cov_52.959942,positive,11362-12048,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Belgium,,38.0,,
SRR12599311,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599311_AMRSEG0001,NODE_103_length_17490_cov_50.511907,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Belgium,,38.0,,
SRR12599311,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599311_AMRSEG0002,NODE_113_length_14764_cov_50.274403,positive,9074-10662,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Belgium,,38.0,,
SRR12599311,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599311_AMRSEG0003,NODE_1_length_290278_cov_54.137639,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Belgium,,38.0,,
SRR12599311,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599311_AMRSEG0004,NODE_31_length_60524_cov_54.079704,positive,15455-16000,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Belgium,,38.0,,
SRR12599311,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599311_AMRSEG0005,NODE_61_length_34071_cov_53.713861,positive,11329-12015,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Belgium,,38.0,,
SRR12599318,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599318_AMRSEG0001,NODE_1_length_285931_cov_54.448256,negative,192834-196256,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,,38.0,,
SRR12599318,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599318_AMRSEG0002,NODE_34_length_61119_cov_53.088001,positive,15884-16429,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,,38.0,,
SRR12599318,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599318_AMRSEG0003,NODE_43_length_53247_cov_50.358660,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,,38.0,,
SRR12599318,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599318_AMRSEG0004,NODE_60_length_34044_cov_53.159001,negative,22040-22726,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,,38.0,,
SRR12599318,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599318_AMRSEG0005,NODE_99_length_15584_cov_48.809870,negative,4093-5681,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Switzerland,,38.0,,
SRR12599319,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599319_AMRSEG0001,NODE_2_length_285774_cov_50.828656,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599319,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599319_AMRSEG0002,NODE_32_length_61250_cov_49.608168,negative,44512-45057,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599319,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599319_AMRSEG0003,NODE_61_length_33876_cov_48.043593,negative,21843-22529,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599319,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599319_AMRSEG0004,NODE_92_length_17544_cov_46.182884,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599319,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599319_AMRSEG0005,NODE_96_length_15596_cov_45.807635,positive,9910-11498,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599321,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599321_AMRSEG0001,NODE_1_length_290297_cov_47.085590,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599321,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599321_AMRSEG0002,NODE_33_length_61240_cov_46.265508,positive,16185-16730,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599321,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599321_AMRSEG0003,NODE_61_length_34069_cov_44.439011,negative,22037-22723,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599321,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599321_AMRSEG0004,NODE_90_length_17490_cov_42.288690,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599321,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599321_AMRSEG0005,NODE_95_length_15661_cov_42.913194,positive,9971-11559,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599322,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599322_AMRSEG0001,NODE_2_length_290245_cov_50.526070,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599322,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599322_AMRSEG0002,NODE_33_length_61275_cov_49.737045,negative,44511-45056,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599322,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599322_AMRSEG0003,NODE_60_length_34148_cov_48.109462,positive,11404-12090,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599322,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599322_AMRSEG0004,NODE_92_length_17508_cov_45.005388,negative,15430-15737,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599322,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599322_AMRSEG0005,NODE_93_length_15600_cov_45.821137,positive,9910-11498,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599325,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599325_AMRSEG0001,NODE_17_length_131231_cov_28.721403,positive,15215-15760,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599325,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599325_AMRSEG0002,NODE_2_length_289040_cov_30.034837,negative,195943-199365,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599325,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599325_AMRSEG0003,NODE_31_length_75576_cov_29.512508,negative,36261-36568,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599325,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599325_AMRSEG0004,NODE_36_length_62058_cov_30.175966,positive,14044-15632,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599325,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599325_AMRSEG0005,NODE_5_length_216129_cov_30.327784,positive,66211-66897,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599326,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599326_AMRSEG0001,NODE_18_length_132162_cov_42.734003,positive,16562-17107,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599326,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599326_AMRSEG0002,NODE_3_length_292841_cov_44.485330,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599326,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599326_AMRSEG0003,NODE_42_length_38339_cov_44.168408,negative,36261-36568,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599326,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599326_AMRSEG0004,NODE_5_length_242605_cov_44.574593,negative,46424-48012,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599326,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599326_AMRSEG0005,NODE_7_length_218585_cov_44.362394,positive,66226-66912,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599327,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599327_AMRSEG0001,NODE_19_length_131297_cov_44.445555,negative,115524-116069,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599327,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599327_AMRSEG0002,NODE_28_length_91949_cov_45.571012,positive,43938-45526,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599327,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599327_AMRSEG0003,NODE_2_length_293317_cov_45.720188,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599327,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599327_AMRSEG0004,NODE_42_length_38339_cov_44.680479,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599327,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599327_AMRSEG0005,NODE_6_length_215710_cov_45.277926,negative,148799-149485,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599328,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599328_AMRSEG0001,NODE_16_length_152120_cov_43.214755,positive,2347-3033,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599328,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599328_AMRSEG0002,NODE_20_length_129236_cov_40.311946,positive,92669-92976,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599328,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599328_AMRSEG0003,NODE_3_length_224864_cov_42.743449,negative,205566-208988,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599328,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599328_AMRSEG0004,NODE_52_length_28268_cov_44.679560,negative,12386-12931,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599328,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599328_AMRSEG0005,NODE_55_length_25514_cov_38.655102,positive,14100-15692,99.94,85.63,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599329,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599329_AMRSEG0001,NODE_26_length_74460_cov_33.779897,negative,58496-59041,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599329,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599329_AMRSEG0002,NODE_37_length_57054_cov_32.325648,positive,9043-10631,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599329,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599329_AMRSEG0003,NODE_47_length_38339_cov_32.521005,negative,36261-36568,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599329,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599329_AMRSEG0004,NODE_7_length_215414_cov_33.584957,positive,15877-19299,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599329,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599329_AMRSEG0005,NODE_8_length_215185_cov_33.572433,positive,65693-66379,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599332,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599332_AMRSEG0001,NODE_106_length_14682_cov_37.864970,positive,8996-10584,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599332,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599332_AMRSEG0002,NODE_1_length_285776_cov_41.607599,negative,192679-196101,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599332,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599332_AMRSEG0003,NODE_31_length_62114_cov_39.711769,negative,44506-45051,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599332,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599332_AMRSEG0004,NODE_62_length_33912_cov_38.850188,negative,21879-22565,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599332,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599332_AMRSEG0005,NODE_99_length_16147_cov_37.823365,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599334,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599334_AMRSEG0001,NODE_19_length_131458_cov_43.866761,negative,115523-116068,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599334,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599334_AMRSEG0002,NODE_29_length_67552_cov_43.629095,negative,48515-50107,99.94,85.63,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599334,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599334_AMRSEG0003,NODE_4_length_289072_cov_45.198994,negative,195975-199397,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599334,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599334_AMRSEG0004,NODE_5_length_245708_cov_44.101455,positive,92601-92908,89.28,87.99,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599334,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599334_AMRSEG0005,NODE_9_length_218881_cov_44.097163,negative,151985-152671,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599335,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599335_AMRSEG0001,NODE_17_length_132685_cov_42.204250,positive,16852-17397,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599335,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599335_AMRSEG0002,NODE_43_length_38339_cov_40.585798,negative,36261-36568,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599335,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599335_AMRSEG0003,NODE_4_length_242657_cov_41.759528,negative,46424-48012,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599335,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599335_AMRSEG0004,NODE_7_length_219238_cov_42.602733,negative,199940-203362,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599335,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599335_AMRSEG0005,NODE_8_length_215539_cov_42.790789,negative,148628-149314,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599337,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599337_AMRSEG0001,NODE_17_length_133582_cov_40.189336,positive,15475-16020,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,,,
SRR12599337,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599337_AMRSEG0002,NODE_1_length_294919_cov_41.039426,positive,91339-94761,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,,,
SRR12599337,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599337_AMRSEG0003,NODE_3_length_242657_cov_40.769937,negative,46424-48012,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,,,
SRR12599337,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599337_AMRSEG0004,NODE_49_length_38339_cov_41.727218,negative,36261-36568,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,,,
SRR12599337,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599337_AMRSEG0005,NODE_7_length_218729_cov_41.674197,positive,66226-66912,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,,,
SRR12599338,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599338_AMRSEG0001,NODE_17_length_131271_cov_38.200171,positive,15225-15770,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599338,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599338_AMRSEG0002,NODE_23_length_92067_cov_35.580442,negative,46424-48012,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599338,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599338_AMRSEG0003,NODE_2_length_412919_cov_36.662803,positive,209772-213194,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599338,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599338_AMRSEG0004,NODE_41_length_38339_cov_35.842930,negative,36261-36568,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599338,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599338_AMRSEG0005,NODE_8_length_215696_cov_37.210524,positive,66226-66912,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599339,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599339_AMRSEG0001,NODE_18_length_131072_cov_39.357067,negative,115296-115841,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599339,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599339_AMRSEG0002,NODE_24_length_92015_cov_39.378839,positive,44004-45592,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599339,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599339_AMRSEG0003,NODE_45_length_38339_cov_40.952163,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599339,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599339_AMRSEG0004,NODE_4_length_302420_cov_40.060306,negative,209323-212745,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599339,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599339_AMRSEG0005,NODE_8_length_215696_cov_40.162099,positive,66226-66912,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Canada,,38.0,,
SRR12599340,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599340_AMRSEG0001,NODE_1_length_290208_cov_49.768671,negative,197111-200533,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,38.0,,
SRR12599340,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599340_AMRSEG0002,NODE_30_length_60742_cov_49.019101,negative,44497-45042,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,38.0,,
SRR12599340,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599340_AMRSEG0003,NODE_59_length_34068_cov_48.856492,positive,11343-12029,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,38.0,,
SRR12599340,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599340_AMRSEG0004,NODE_91_length_17392_cov_48.159675,negative,15314-15621,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,38.0,,
SRR12599340,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599340_AMRSEG0005,NODE_99_length_14655_cov_46.750959,positive,8969-10557,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,38.0,,
SRR12599341,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599341_AMRSEG0001,NODE_1_length_285915_cov_50.912416,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,38.0,,
SRR12599341,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599341_AMRSEG0002,NODE_31_length_61015_cov_51.194317,negative,44485-45030,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,38.0,,
SRR12599341,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599341_AMRSEG0003,NODE_63_length_33882_cov_51.217274,negative,21844-22530,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,38.0,,
SRR12599341,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599341_AMRSEG0004,NODE_95_length_18574_cov_45.766949,negative,7164-8752,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,38.0,,
SRR12599341,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599341_AMRSEG0005,NODE_99_length_17395_cov_48.743307,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,38.0,,
SRR12599342,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599342_AMRSEG0001,NODE_107_length_14633_cov_49.583047,positive,8943-10531,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,38.0,,
SRR12599342,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599342_AMRSEG0002,NODE_3_length_215437_cov_55.195107,negative,122340-125762,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,38.0,,
SRR12599342,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599342_AMRSEG0003,NODE_40_length_53858_cov_54.295752,negative,44634-45179,100.0,82.6,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,38.0,,
SRR12599342,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599342_AMRSEG0004,NODE_65_length_33861_cov_53.751613,positive,11344-12030,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,38.0,,
SRR12599342,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599342_AMRSEG0005,NODE_99_length_17189_cov_52.358811,negative,15111-15418,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,38.0,,
SRR12599343,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599343_AMRSEG0001,NODE_1_length_285730_cov_46.191177,positive,89676-93098,97.13,80.37,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599343,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599343_AMRSEG0002,NODE_37_length_61216_cov_45.795349,negative,44511-45056,100.0,83.52,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599343,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599343_AMRSEG0003,NODE_60_length_34137_cov_42.635734,positive,11395-12081,100.0,90.97,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599343,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599343_AMRSEG0004,NODE_92_length_17491_cov_42.275304,positive,1772-2079,89.28,87.01,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599343,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599343_AMRSEG0005,NODE_98_length_15597_cov_41.868997,negative,4101-5689,99.69,85.66,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599344,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599344_AMRSEG0001,NODE_100_length_15602_cov_45.642319,positive,9914-11502,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,38.0,,
SRR12599344,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599344_AMRSEG0002,NODE_1_length_285761_cov_49.293779,negative,192664-196086,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,38.0,,
SRR12599344,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599344_AMRSEG0003,NODE_31_length_61273_cov_48.472570,negative,44517-45062,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,38.0,,
SRR12599344,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599344_AMRSEG0004,NODE_63_length_34102_cov_49.428244,negative,22062-22748,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,38.0,,
SRR12599344,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599344_AMRSEG0005,NODE_97_length_17490_cov_49.351294,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,38.0,,
SRR12599345,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599345_AMRSEG0001,NODE_1_length_290185_cov_47.698951,negative,197088-200510,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,,,
SRR12599345,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599345_AMRSEG0002,NODE_32_length_60615_cov_47.091029,positive,15565-16110,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,,,
SRR12599345,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599345_AMRSEG0003,NODE_61_length_34171_cov_47.260936,positive,11352-12038,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,,,
SRR12599345,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599345_AMRSEG0004,NODE_94_length_17189_cov_47.557748,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,,,
SRR12599345,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599345_AMRSEG0005,NODE_96_length_15596_cov_43.273740,negative,4099-5687,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,South Africa,,,,
SRR12599346,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599346_AMRSEG0001,NODE_105_length_17388_cov_36.733449,positive,1772-2079,89.28,87.01,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599346,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599346_AMRSEG0002,NODE_111_length_15626_cov_34.892244,negative,4074-5662,99.69,85.66,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599346,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599346_AMRSEG0003,NODE_1_length_285921_cov_39.888871,positive,89676-93098,97.13,80.37,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599346,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599346_AMRSEG0004,NODE_29_length_60802_cov_39.538386,positive,15648-16193,100.0,83.52,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599346,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599346_AMRSEG0005,NODE_61_length_33959_cov_39.848330,positive,11342-12028,100.0,90.97,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599347,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599347_AMRSEG0001,NODE_102_length_15590_cov_36.653700,positive,9910-11498,99.69,85.66,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599347,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599347_AMRSEG0002,NODE_1_length_285804_cov_40.797432,positive,89676-93098,97.13,80.37,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599347,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599347_AMRSEG0003,NODE_29_length_60615_cov_40.057372,negative,44498-45043,100.0,83.52,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599347,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599347_AMRSEG0004,NODE_63_length_33847_cov_40.203676,positive,11330-12016,100.0,90.97,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599347,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599347_AMRSEG0005,NODE_98_length_17409_cov_39.126600,positive,1772-2079,89.28,87.01,Environment,Environment: wild environment,Environment:Wild Environment:water,Australia,,38.0,,
SRR12599350,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599350_AMRSEG0001,NODE_108_length_14595_cov_45.311038,positive,8928-10516,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599350,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599350_AMRSEG0002,NODE_28_length_60467_cov_48.083024,positive,15423-15968,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599350,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599350_AMRSEG0003,NODE_2_length_295322_cov_49.049370,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599350,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599350_AMRSEG0004,NODE_60_length_33780_cov_48.091556,positive,11346-12032,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599350,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599350_AMRSEG0005,NODE_96_length_17388_cov_45.535469,negative,15310-15617,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599351,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599351_AMRSEG0001,NODE_1_length_290265_cov_47.000396,negative,197168-200590,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599351,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599351_AMRSEG0002,NODE_54_length_37449_cov_48.014604,negative,20754-21299,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599351,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599351_AMRSEG0003,NODE_60_length_34078_cov_45.919036,negative,22058-22744,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599351,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599351_AMRSEG0004,NODE_95_length_17489_cov_45.994606,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599351,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599351_AMRSEG0005,NODE_97_length_15591_cov_42.890649,positive,9911-11499,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599352,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599352_AMRSEG0001,NODE_105_length_14634_cov_49.030540,negative,4099-5687,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599352,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599352_AMRSEG0002,NODE_16_length_89529_cov_50.348300,positive,66914-67600,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599352,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR12599352_AMRSEG0003,NODE_1_length_276350_cov_52.561290,negative,183253-186675,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599352,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599352_AMRSEG0004,NODE_31_length_60613_cov_51.759983,negative,44510-45055,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599352,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599352_AMRSEG0005,NODE_94_length_17360_cov_49.876163,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,38.0,,
SRR12599353,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR12599353_AMRSEG0001,NODE_109_length_16940_cov_59.660129,positive,1788-2095,89.28,87.34,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,743.0,,
SRR12599353,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR12599353_AMRSEG0002,NODE_16_length_91152_cov_61.944856,positive,7909-9501,100.0,85.62,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,743.0,,
SRR12599353,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR12599353_AMRSEG0003,NODE_40_length_57730_cov_64.024139,negative,49160-49703,99.63,82.72,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,743.0,,
SRR12599353,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR12599353_AMRSEG0004,NODE_97_length_22316_cov_62.841999,negative,20260-20946,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,Australia,,743.0,,
SRR14041274,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR14041274_AMRSEG0001,NODE_189_length_7076_cov_66.824469,positive,1390-2978,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,India,2017/3/3,38.0,,
SRR14041274,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR14041274_AMRSEG0002,NODE_30_length_58098_cov_70.199311,negative,38793-42215,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,India,2017/3/3,38.0,,
SRR14041274,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR14041274_AMRSEG0003,NODE_53_length_40972_cov_72.487570,negative,24998-25543,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,India,2017/3/3,38.0,,
SRR14041274,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR14041274_AMRSEG0004,NODE_69_length_33780_cov_68.163805,positive,11352-12038,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,India,2017/3/3,38.0,,
SRR14041274,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR14041274_AMRSEG0005,NODE_84_length_27919_cov_84.907094,negative,25841-26148,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,India,2017/3/3,38.0,,
SRR16251427,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR16251427_AMRSEG0001,NODE_108_length_16910_cov_335.893393,negative,7377-8965,99.69,85.66,,,,Germany,,38.0,,
SRR16251427,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR16251427_AMRSEG0002,NODE_11_length_105874_cov_359.094820,positive,90295-90602,89.28,87.01,,,,Germany,,38.0,,
SRR16251427,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR16251427_AMRSEG0003,NODE_13_length_103419_cov_347.690516,negative,87470-88015,100.0,83.52,,,,Germany,,38.0,,
SRR16251427,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR16251427_AMRSEG0004,NODE_1_length_205520_cov_348.270928,negative,196500-199922,97.13,80.37,,,,Germany,,38.0,,
SRR16251427,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR16251427_AMRSEG0005,NODE_77_length_27204_cov_333.844884,negative,5038-5724,100.0,90.97,,,,Germany,,38.0,,
SRR3665562,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3665562_AMRSEG0002,NODE_42_length_38104_cov_22.326910,positive,1537-1844,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665562,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR3665562_AMRSEG0003,NODE_59_length_18016_cov_21.585696,negative,7513-9101,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665562,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3665562_AMRSEG0004,NODE_5_length_225056_cov_23.613321,negative,205625-209047,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665562,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3665562_AMRSEG0005,NODE_6_length_214311_cov_23.310761,negative,147400-148086,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665563,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR3665563_AMRSEG0001,NODE_17_length_125221_cov_19.848304,negative,115103-115648,100.0,82.78,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665563,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR3665563_AMRSEG0002,NODE_32_length_83315_cov_18.506294,negative,7643-9231,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665563,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3665563_AMRSEG0003,NODE_45_length_38104_cov_19.309377,negative,36261-36568,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665563,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3665563_AMRSEG0004,NODE_5_length_307569_cov_19.319773,negative,288138-291560,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665563,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3665563_AMRSEG0005,NODE_7_length_214311_cov_19.406282,negative,147400-148086,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665564,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR3665564_AMRSEG0001,NODE_17_length_131534_cov_16.811145,negative,115243-115788,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665564,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3665564_AMRSEG0002,NODE_47_length_38104_cov_16.833233,negative,36261-36568,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665564,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3665564_AMRSEG0003,NODE_5_length_215927_cov_16.486061,positive,16010-19432,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665564,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3665564_AMRSEG0004,NODE_6_length_214497_cov_16.500653,negative,147586-148272,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665564,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR3665564_AMRSEG0005,NODE_75_length_17710_cov_15.857200,positive,8721-10309,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665565,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR3665565_AMRSEG0001,NODE_15_length_131762_cov_17.836271,positive,16027-16572,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665565,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3665565_AMRSEG0002,NODE_3_length_216812_cov_18.083474,positive,16010-19432,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665565,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3665565_AMRSEG0003,NODE_46_length_38104_cov_17.801767,negative,36261-36568,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665565,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3665565_AMRSEG0004,NODE_5_length_182010_cov_18.172078,negative,147198-147884,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665565,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR3665565_AMRSEG0005,NODE_71_length_17643_cov_17.275142,negative,7402-8990,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665566,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3665566_AMRSEG0001,NODE_109_length_17345_cov_24.968869,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665566,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR3665566_AMRSEG0002,NODE_114_length_16959_cov_25.260476,positive,7998-9586,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665566,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3665566_AMRSEG0003,NODE_30_length_57931_cov_27.838512,positive,15868-19290,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665566,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR3665566_AMRSEG0004,NODE_8_length_103519_cov_26.619500,positive,15323-15868,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665566,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3665566_AMRSEG0005,NODE_98_length_19463_cov_25.799794,negative,5067-5753,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665567,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR3665567_AMRSEG0001,NODE_17_length_131461_cov_21.723793,positive,15767-16312,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665567,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3665567_AMRSEG0002,NODE_33_length_78003_cov_20.090031,negative,11092-11778,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665567,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3665567_AMRSEG0003,NODE_46_length_38104_cov_20.213480,negative,36261-36568,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665567,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3665567_AMRSEG0004,NODE_4_length_216742_cov_21.166426,positive,16010-19432,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665567,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR3665567_AMRSEG0005,NODE_69_length_17882_cov_19.772097,positive,8797-10385,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665568,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR3665568_AMRSEG0001,NODE_17_length_131577_cov_19.897859,positive,15919-16464,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665568,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3665568_AMRSEG0002,NODE_4_length_225060_cov_19.908434,positive,16010-19432,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665568,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR3665568_AMRSEG0003,NODE_61_length_17834_cov_19.126554,negative,7519-9107,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665568,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3665568_AMRSEG0004,NODE_62_length_17243_cov_20.858556,positive,1537-1844,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665568,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3665568_AMRSEG0005,NODE_7_length_214009_cov_19.721822,positive,66226-66912,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665569,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR3665569_AMRSEG0001,NODE_16_length_131843_cov_21.437555,negative,115273-115818,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665569,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3665569_AMRSEG0002,NODE_5_length_225114_cov_21.444113,positive,16010-19432,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665569,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR3665569_AMRSEG0003,NODE_70_length_17886_cov_20.458284,negative,7506-9094,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665569,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3665569_AMRSEG0004,NODE_72_length_17052_cov_22.163047,negative,15209-15516,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665569,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3665569_AMRSEG0005,NODE_7_length_181399_cov_21.015220,positive,66226-66912,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665570,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR3665570_AMRSEG0001,NODE_17_length_131888_cov_22.747157,negative,115335-115880,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665570,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3665570_AMRSEG0002,NODE_41_length_38104_cov_21.709892,negative,36261-36568,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665570,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR3665570_AMRSEG0003,NODE_59_length_17871_cov_21.325416,positive,8777-10365,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665570,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3665570_AMRSEG0004,NODE_5_length_225041_cov_22.375241,negative,205610-209032,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665570,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3665570_AMRSEG0005,NODE_8_length_214470_cov_22.386303,negative,147559-148245,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665571,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR3665571_AMRSEG0001,NODE_104_length_17583_cov_13.088642,positive,8487-10075,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665571,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3665571_AMRSEG0002,NODE_106_length_17158_cov_13.885347,positive,1537-1844,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665571,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3665571_AMRSEG0003,NODE_16_length_91318_cov_14.149143,negative,71887-75309,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665571,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3665571_AMRSEG0004,NODE_17_length_87249_cov_12.985961,positive,64479-65165,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665571,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR3665571_AMRSEG0005,NODE_29_length_64893_cov_14.004566,negative,48406-48951,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665572,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR3665572_AMRSEG0001,NODE_13_length_134060_cov_16.923797,positive,15796-16341,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665572,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3665572_AMRSEG0002,NODE_17_length_108116_cov_17.140875,positive,16010-19432,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665572,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3665572_AMRSEG0003,NODE_33_length_69746_cov_15.638362,positive,66239-66925,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665572,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR3665572_AMRSEG0004,NODE_83_length_17823_cov_15.564358,negative,7446-9034,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665572,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3665572_AMRSEG0005,NODE_85_length_17038_cov_16.126951,positive,1537-1844,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665573,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR3665573_AMRSEG0001,NODE_17_length_132974_cov_21.758748,positive,17061-17606,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665573,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3665573_AMRSEG0002,NODE_4_length_225107_cov_21.225018,negative,205676-209098,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665573,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR3665573_AMRSEG0003,NODE_64_length_17884_cov_20.092082,positive,8776-10364,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665573,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3665573_AMRSEG0004,NODE_65_length_17240_cov_21.185830,negative,15397-15704,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665573,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3665573_AMRSEG0005,NODE_9_length_181399_cov_20.873864,negative,114488-115174,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665574,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR3665574_AMRSEG0001,NODE_17_length_133107_cov_21.814881,negative,115393-115938,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665574,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3665574_AMRSEG0002,NODE_42_length_38094_cov_20.766112,positive,1537-1844,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665574,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR3665574_AMRSEG0003,NODE_56_length_17922_cov_19.780615,positive,8818-10406,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665574,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3665574_AMRSEG0004,NODE_5_length_225077_cov_21.220440,negative,205646-209068,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665574,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3665574_AMRSEG0005,NODE_9_length_181400_cov_20.904791,positive,66226-66912,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665575,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3665575_AMRSEG0001,NODE_10_length_181399_cov_20.567653,negative,114488-115174,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665575,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR3665575_AMRSEG0002,NODE_14_length_140957_cov_21.037872,negative,115783-116328,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665575,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR3665575_AMRSEG0003,NODE_20_length_120833_cov_20.016784,positive,73985-75573,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665575,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3665575_AMRSEG0004,NODE_3_length_339453_cov_21.122679,positive,16010-19432,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665575,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3665575_AMRSEG0005,NODE_48_length_38104_cov_20.785127,positive,1537-1844,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,38.0,,
SRR3665576,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR3665576_AMRSEG0001,NODE_15_length_132839_cov_17.509038,negative,115239-115784,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665576,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3665576_AMRSEG0002,NODE_40_length_54063_cov_16.619333,negative,22164-22850,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665576,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR3665576_AMRSEG0003,NODE_41_length_53123_cov_16.063230,negative,7520-9108,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665576,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3665576_AMRSEG0004,NODE_4_length_224986_cov_17.092574,positive,16010-19432,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665576,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3665576_AMRSEG0005,NODE_60_length_34534_cov_16.732326,negative,32691-32998,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2007/1/1,38.0,,
SRR3665579,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3665579_AMRSEG0001,NODE_10_length_179092_cov_18.473683,negative,112181-112867,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,609.0,,
SRR3665579,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR3665579_AMRSEG0002,NODE_15_length_132848_cov_19.496261,positive,17042-17587,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,609.0,,
SRR3665579,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3665579_AMRSEG0003,NODE_42_length_42488_cov_19.638869,positive,15877-19299,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,609.0,,
SRR3665579,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3665579_AMRSEG0004,NODE_44_length_38104_cov_18.140848,positive,1537-1844,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,609.0,,
SRR3665579,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR3665579_AMRSEG0005,NODE_64_length_17759_cov_17.460782,positive,8779-10367,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,2008/1/1,609.0,,
SRR3665594,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3665594_AMRSEG0001,NODE_111_length_19482_cov_23.682064,negative,5088-5774,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665594,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR3665594_AMRSEG0002,NODE_127_length_17078_cov_23.774140,negative,7394-8982,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665594,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3665594_AMRSEG0003,NODE_130_length_16033_cov_21.330808,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665594,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR3665594_AMRSEG0004,NODE_20_length_66486_cov_24.778541,positive,15303-15848,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665594,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3665594_AMRSEG0005,NODE_44_length_47646_cov_25.715781,negative,38632-42054,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665603,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3665603_AMRSEG0001,NODE_111_length_17339_cov_20.004226,negative,15261-15568,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665603,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR3665603_AMRSEG0002,NODE_114_length_16961_cov_20.044443,negative,7421-9009,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665603,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3665603_AMRSEG0003,NODE_80_length_27234_cov_19.428656,negative,5064-5750,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665603,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3665603_AMRSEG0004,NODE_88_length_23362_cov_22.115756,negative,4064-7486,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665603,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR3665603_AMRSEG0005,NODE_9_length_103458_cov_21.471193,positive,15389-15934,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665604,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3665604_AMRSEG0001,NODE_106_length_19439_cov_22.773379,negative,5034-5720,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665604,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3665604_AMRSEG0002,NODE_120_length_17363_cov_21.280809,positive,1772-2079,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665604,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR3665604_AMRSEG0003,NODE_126_length_16840_cov_21.646719,positive,7951-9539,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665604,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3665604_AMRSEG0004,NODE_29_length_57930_cov_24.581264,negative,38632-42054,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665604,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR3665604_AMRSEG0005,NODE_8_length_94116_cov_24.132564,positive,15327-15872,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665616,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3665616_AMRSEG0001,NODE_118_length_17342_cov_24.671162,negative,15264-15571,89.28,87.01,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665616,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3665616_AMRSEG0002,NODE_121_length_17091_cov_26.251879,negative,5050-5736,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665616,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR3665616_AMRSEG0003,NODE_123_length_16961_cov_25.316250,positive,8004-9592,99.69,85.66,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665616,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR3665616_AMRSEG0004,NODE_22_length_66521_cov_27.151645,negative,50647-51192,100.0,83.52,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665616,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3665616_AMRSEG0005,NODE_34_length_57930_cov_28.270361,negative,38632-42054,97.13,80.37,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR3665618,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3665618_AMRSEG0001,NODE_111_length_19447_cov_25.937268,negative,5043-5729,100.0,90.97,Homo sapiens,Homo sapiens: pulmonary,Homo sapiens:pulmonary:sputum,China,,38.0,,
SRR6046390,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR6046390_AMRSEG0001,NODE_114_length_17210_cov_24.973290,negative,15385-15692,89.28,87.01,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,United Kingdom,,38.0,,
SRR6046390,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR6046390_AMRSEG0002,NODE_123_length_14767_cov_24.720892,negative,4096-5684,99.69,85.66,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,United Kingdom,,38.0,,
SRR6046390,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR6046390_AMRSEG0003,NODE_1_length_212033_cov_24.871086,negative,192735-196157,97.13,80.37,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,United Kingdom,,38.0,,
SRR6046390,kansasii,1768,AAC(2')-Ic,ARO:3002525,antibiotic inactivation,Mycobacterium tuberculosis H37Rv,aminoglycoside antibiotic,AAC(2')-Ic is a chromosomal-encoded aminoglycoside acetyltransferase in M. tuberculosis and Mycobacterium tuberculosis variant bovis.,SRR6046390_AMRSEG0004,NODE_59_length_36723_cov_25.683006,positive,15441-15986,100.0,83.52,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,United Kingdom,,38.0,,
SRR6046390,kansasii,1768,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR6046390_AMRSEG0005,NODE_64_length_34084_cov_26.895035,positive,11348-12034,100.0,90.97,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,United Kingdom,,38.0,,
SRR6046411,kansasii,1768,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR6046411_AMRSEG0001,NODE_108_length_17435_cov_36.715922,negative,15357-15664,89.28,87.01,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,United Kingdom,,,,
SRR6046411,kansasii,1768,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,SRR6046411_AMRSEG0002,NODE_119_length_14411_cov_35.332869,negative,4087-5675,99.69,85.66,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,United Kingdom,,,,
SRR6046411,kansasii,1768,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR6046411_AMRSEG0003,NODE_2_length_196399_cov_37.335323,positive,89676-93098,97.13,80.37,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,United Kingdom,,,,