strain_accession,species_id,species_name,vfg_id,gene_name,genbank_id,vf_id,vf_name,vf_full_name,vfc_id,vfc_name,source_organism,source_strain,vf_seqid,contig_name,strand,position,coverage,identity,host,source,source_detail,country,date,MLST,subspecies_id,subspecies_name
ERR459752,280871,llatzerense,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],ERR459752_VFSEQ0001,NODE_11_length_163401_cov_20.919437,positive,100725-101417,93.15,80.66,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,,2014/3/18,,,
ERR459752,280871,llatzerense,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],ERR459752_VFSEQ0002,NODE_14_length_142652_cov_20.944477,positive,91701-92957,97.2,82.58,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,,2014/3/18,,,
ERR459752,280871,llatzerense,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],ERR459752_VFSEQ0003,NODE_2_length_344711_cov_20.275380,negative,143402-144091,99.57,80.95,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,,2014/3/18,,,
ERR459752,280871,llatzerense,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],ERR459752_VFSEQ0004,NODE_2_length_344711_cov_20.275380,positive,234377-236634,94.99,82.58,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,,2014/3/18,,,
ERR459752,280871,llatzerense,VFG001818,mbtH,NP_216893,VF0299,Mycobactin,,VFC0272,Nutritional/Metabolic factor,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],ERR459752_VFSEQ0005,NODE_7_length_252524_cov_20.260436,positive,171791-171997,95.83,82.13,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,,2014/3/18,,,
GCF_000746215.1,280871,llatzerense,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_000746215.1_VFSEQ0001,NZ_JQKU01000001.1,positive,202398-203090,93.15,80.66,,,,,2014/8/28,185.0,,
GCF_000746215.1,280871,llatzerense,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_000746215.1_VFSEQ0002,NZ_JQKU01000007.1,negative,393511-394200,99.57,81.96,,,,,2014/8/28,185.0,,
GCF_000746215.1,280871,llatzerense,VFG001818,mbtH,NP_216893,VF0299,Mycobactin,,VFC0272,Nutritional/Metabolic factor,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_000746215.1_VFSEQ0003,NZ_JQKU01000008.1,negative,37166-37372,95.83,81.64,,,,,2014/8/28,185.0,,
GCF_000746215.1,280871,llatzerense,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_000746215.1_VFSEQ0004,NZ_JQKU01000024.1,negative,32063-34320,94.99,82.09,,,,,2014/8/28,185.0,,
GCF_000746215.1,280871,llatzerense,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_000746215.1_VFSEQ0005,NZ_KN050822.1,positive,142060-143316,97.2,82.5,,,,,2014/8/28,185.0,,
GCF_001865165.1,280871,llatzerense,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001865165.1_VFSEQ0001,NZ_LIPZ01000001.1,negative,90736-91425,99.57,81.67,Environment,Environment: urban environment,Environment:Urban environment:drinking water network,France,2016/11/2,549.0,,
GCF_001865165.1,280871,llatzerense,VFG001818,mbtH,NP_216893,VF0299,Mycobactin,,VFC0272,Nutritional/Metabolic factor,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001865165.1_VFSEQ0002,NZ_LIPZ01000008.1,negative,322-528,95.83,81.16,Environment,Environment: urban environment,Environment:Urban environment:drinking water network,France,2016/11/2,549.0,,
GCF_001865165.1,280871,llatzerense,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001865165.1_VFSEQ0003,NZ_LIPZ01000013.1,positive,71068-71760,93.15,80.52,Environment,Environment: urban environment,Environment:Urban environment:drinking water network,France,2016/11/2,549.0,,
GCF_001865165.1,280871,llatzerense,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001865165.1_VFSEQ0004,NZ_LIPZ01000015.1,positive,34328-35584,97.2,82.5,Environment,Environment: urban environment,Environment:Urban environment:drinking water network,France,2016/11/2,549.0,,
GCF_001865165.1,280871,llatzerense,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001865165.1_VFSEQ0005,NZ_LIPZ01000027.1,positive,2447-4704,94.99,82.36,Environment,Environment: urban environment,Environment:Urban environment:drinking water network,France,2016/11/2,549.0,,
SRR1587779,280871,llatzerense,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR1587779_VFSEQ0001,NODE_19_length_107925_cov_50.721088,negative,471-1163,93.15,80.66,,,,,,185.0,,
SRR1587779,280871,llatzerense,VFG001818,mbtH,NP_216893,VF0299,Mycobactin,,VFC0272,Nutritional/Metabolic factor,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR1587779_VFSEQ0002,NODE_1_length_744958_cov_45.264500,positive,334990-335196,95.83,81.64,,,,,,185.0,,
SRR1587779,280871,llatzerense,VFG001818,mbtH,NP_216893,VF0299,Mycobactin,,VFC0272,Nutritional/Metabolic factor,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR1587779_VFSEQ0003,NODE_1_length_744958_cov_45.264500,negative,409763-409969,95.83,81.64,,,,,,185.0,,
SRR1587779,280871,llatzerense,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR1587779_VFSEQ0004,NODE_23_length_85246_cov_36.661998,positive,51138-53395,94.99,82.09,,,,,,185.0,,
SRR1587779,280871,llatzerense,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR1587779_VFSEQ0005,NODE_2_length_561823_cov_46.450443,negative,418242-419498,97.2,82.5,,,,,,185.0,,
SRR1587779,280871,llatzerense,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR1587779_VFSEQ0006,NODE_4_length_367569_cov_39.457489,positive,25236-25925,99.57,81.96,,,,,,185.0,,
SRR6045514,280871,llatzerense,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6045514_VFSEQ0001,NODE_1_length_441245_cov_23.227938,negative,220166-220855,99.57,81.67,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,,,
SRR6045514,280871,llatzerense,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6045514_VFSEQ0002,NODE_1_length_441245_cov_23.227938,positive,300515-302772,94.99,82.63,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,,,
SRR6045514,280871,llatzerense,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6045514_VFSEQ0003,NODE_28_length_81752_cov_23.040520,negative,73207-73899,93.15,80.66,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,,,
SRR6045514,280871,llatzerense,VFG001818,mbtH,NP_216893,VF0299,Mycobactin,,VFC0272,Nutritional/Metabolic factor,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6045514_VFSEQ0004,NODE_32_length_75888_cov_22.508025,negative,5849-6055,95.83,81.16,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,,,
SRR6045514,280871,llatzerense,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6045514_VFSEQ0005,NODE_3_length_353602_cov_24.720961,negative,87109-88365,97.2,82.82,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,,,
SRR6046009,280871,llatzerense,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6046009_VFSEQ0001,NODE_24_length_83807_cov_17.598395,positive,77822-79078,97.2,82.66,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,,,
SRR6046009,280871,llatzerense,VFG001818,mbtH,NP_216893,VF0299,Mycobactin,,VFC0272,Nutritional/Metabolic factor,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6046009_VFSEQ0002,NODE_3_length_212525_cov_18.468376,negative,141400-141606,95.83,82.13,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,,,
SRR6046009,280871,llatzerense,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6046009_VFSEQ0003,NODE_41_length_57550_cov_18.856594,negative,12088-12780,93.15,80.81,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,,,
SRR6046009,280871,llatzerense,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6046009_VFSEQ0004,NODE_46_length_53268_cov_18.214378,negative,18955-19644,99.57,81.1,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,,,
SRR6046009,280871,llatzerense,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6046009_VFSEQ0005,NODE_8_length_146916_cov_16.710772,negative,139873-142130,94.99,82.58,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,,,
SRR6046506,280871,llatzerense,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6046506_VFSEQ0001,NODE_27_length_63689_cov_14.454185,positive,25897-27153,97.2,82.66,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,,,
SRR6046506,280871,llatzerense,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6046506_VFSEQ0002,NODE_37_length_57545_cov_15.376500,negative,12088-12780,93.15,80.81,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,,,
SRR6046506,280871,llatzerense,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6046506_VFSEQ0003,NODE_46_length_53275_cov_14.287266,negative,18962-19651,99.57,81.1,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,,,
SRR6046506,280871,llatzerense,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6046506_VFSEQ0004,NODE_50_length_47147_cov_13.385163,positive,28932-31189,94.99,82.58,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,,,
SRR6046506,280871,llatzerense,VFG001818,mbtH,NP_216893,VF0299,Mycobactin,,VFC0272,Nutritional/Metabolic factor,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6046506_VFSEQ0005,NODE_6_length_139180_cov_14.329888,negative,68055-68261,95.83,82.13,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,,,