strain_accession,species_name,species_id,gene_name,card_accession,mechanism,AMR_gene_ref_strain,card_drug_class,definition,amr_seqid,contig,strand,position,coverage,identity,host,source,source_detail,country,date,MLST,subspecies_id,subspecies_name
ERR337762,mucogenicum,56689,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR337762_AMRSEG0001,NODE_11_length_170350_cov_17.127338,positive,95970-96301,96.23,87.95,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,,2013/9/3,,,
ERR337762,mucogenicum,56689,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR337762_AMRSEG0002,NODE_7_length_188880_cov_18.028763,positive,61799-65278,99.08,81.15,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,,2013/9/3,,,
ERR337762,mucogenicum,56689,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR337762_AMRSEG0003,NODE_90_length_8838_cov_18.611966,negative,5304-5990,100.0,87.05,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,,2013/9/3,,,
ERR363352,mucogenicum,56689,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR363352_AMRSEG0001,NODE_5_length_198873_cov_26.535979,negative,123603-127082,99.08,81.15,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,,2013/11/4,,,
ERR363352,mucogenicum,56689,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR363352_AMRSEG0002,NODE_7_length_188078_cov_26.584219,negative,91778-92109,96.23,87.95,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,,2013/11/4,,,
ERR363352,mucogenicum,56689,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR363352_AMRSEG0003,NODE_85_length_8838_cov_28.184046,negative,5304-5990,100.0,87.05,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,,2013/11/4,,,
GCF_001291445.1,mucogenicum,56689,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_001291445.1_AMRSEG0001,NZ_CYSI01000007.1,positive,4324826-4328295,98.8,81.12,,,,,2015/9/11,176.0,,
GCF_001291445.1,mucogenicum,56689,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_001291445.1_AMRSEG0002,NZ_CYSI01000007.1,positive,4913117-4913803,100.0,85.88,,,,,2015/9/11,176.0,,
GCF_001291445.1,mucogenicum,56689,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_001291445.1_AMRSEG0003,NZ_CYSI01000007.1,negative,5527538-5527869,96.23,87.35,,,,,2015/9/11,176.0,,