strain_accession,species_name,species_id,gene_name,card_accession,mechanism,AMR_gene_ref_strain,card_drug_class,definition,amr_seqid,contig,strand,position,coverage,identity,host,source,source_detail,country,date,MLST,subspecies_id,subspecies_name
DRR161215,parmense,185642,mfpA,ARO:3003035,antibiotic target protection,Mycobacterium tuberculosis H37Rv,fluoroquinolone antibiotic,mfpA is a qnr homolog and a pentapeptide repeat protein that confers resistance to fluoroquinolones in Mycolicibacterium smegmatis.,DRR161215_AMRSEG0001,NODE_1_length_613349_cov_18.763367,negative,30557-31072,93.48,80.04,,,,,,689.0,,
DRR161215,parmense,185642,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",DRR161215_AMRSEG0002,NODE_1_length_613349_cov_18.763367,negative,202100-205515,97.19,81.0,,,,,,689.0,,
DRR161215,parmense,185642,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,DRR161215_AMRSEG0003,NODE_4_length_506265_cov_18.524277,negative,497865-498551,100.0,89.08,,,,,,689.0,,
DRR161215,parmense,185642,efpA,ARO:3003955,antibiotic efflux,Mycobacterium tuberculosis H37Rv,rifamycin antibiotic;isoniazid-like antibiotic,efpA is an MFS transporter found in Mycobacterium tuberculosis.,DRR161215_AMRSEG0004,NODE_7_length_298863_cov_18.576633,positive,97258-98850,100.0,84.18,,,,,,689.0,,
DRR161215,parmense,185642,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,DRR161215_AMRSEG0005,NODE_8_length_281858_cov_18.159332,positive,133505-133812,89.28,88.96,,,,,,689.0,,