strain_accession,species_id,species_name,vfg_id,gene_name,genbank_id,vf_id,vf_name,vf_full_name,vfc_id,vfc_name,source_organism,source_strain,vf_seqid,contig_name,strand,position,coverage,identity,host,source,source_detail,country,date,MLST,subspecies_id,subspecies_name
DRR016043,43304,peregrinum,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR016043_VFSEQ0001,NODE_13_length_178311_cov_83.295981,positive,116737-118021,99.77,85.54,,,,,,,,
DRR016043,43304,peregrinum,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR016043_VFSEQ0002,NODE_6_length_293191_cov_81.596449,positive,95361-96050,92.74,81.88,,,,,,,,
DRR016043,43304,peregrinum,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR016043_VFSEQ0003,NODE_7_length_291543_cov_85.946329,negative,124117-126361,94.61,84.41,,,,,,,,
DRR016048,43304,peregrinum,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR016048_VFSEQ0001,NODE_1_length_284200_cov_62.328257,positive,23530-24814,99.77,85.38,,,,,,184.0,,
DRR016048,43304,peregrinum,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR016048_VFSEQ0002,NODE_24_length_98436_cov_56.137843,negative,56651-57340,92.74,81.3,,,,,,184.0,,
DRR016048,43304,peregrinum,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR016048_VFSEQ0003,NODE_27_length_92931_cov_55.235463,positive,61197-63450,94.99,84.21,,,,,,184.0,,
DRR016048,43304,peregrinum,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR016048_VFSEQ0004,NODE_5_length_195030_cov_55.084727,positive,22746-23433,98.99,80.52,,,,,,184.0,,
DRR016050,43304,peregrinum,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR016050_VFSEQ0001,NODE_11_length_161178_cov_67.958179,negative,63526-64810,99.77,85.38,,,,,,184.0,,
DRR016050,43304,peregrinum,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR016050_VFSEQ0002,NODE_15_length_150135_cov_69.773096,negative,108395-109084,92.74,81.3,,,,,,184.0,,
DRR016050,43304,peregrinum,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR016050_VFSEQ0003,NODE_1_length_579858_cov_70.103721,negative,20586-21273,98.99,80.52,,,,,,184.0,,
DRR016050,43304,peregrinum,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR016050_VFSEQ0004,NODE_1_length_579858_cov_70.103721,positive,154259-156512,94.99,84.21,,,,,,184.0,,
ERR337822,43304,peregrinum,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],ERR337822_VFSEQ0001,NODE_15_length_161216_cov_20.199382,negative,63559-64843,99.77,85.38,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,,2013/9/3,184.0,,
ERR337822,43304,peregrinum,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],ERR337822_VFSEQ0002,NODE_1_length_644576_cov_20.700281,negative,456702-458955,94.99,84.38,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,,2013/9/3,184.0,,
ERR337822,43304,peregrinum,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],ERR337822_VFSEQ0003,NODE_1_length_644576_cov_20.700281,positive,596702-597389,98.99,80.95,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,,2013/9/3,184.0,,
ERR337822,43304,peregrinum,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],ERR337822_VFSEQ0004,NODE_5_length_267804_cov_21.299991,positive,89942-90631,92.74,81.3,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,,2013/9/3,184.0,,
ERR369261,43304,peregrinum,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],ERR369261_VFSEQ0001,NODE_16_length_161216_cov_18.242279,negative,63559-64843,99.77,85.38,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,,2013/11/18,184.0,,
ERR369261,43304,peregrinum,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],ERR369261_VFSEQ0002,NODE_1_length_644594_cov_18.495304,negative,456720-458973,94.99,84.38,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,,2013/11/18,184.0,,
ERR369261,43304,peregrinum,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],ERR369261_VFSEQ0003,NODE_1_length_644594_cov_18.495304,positive,596720-597407,98.99,80.95,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,,2013/11/18,184.0,,
ERR369261,43304,peregrinum,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],ERR369261_VFSEQ0004,NODE_2_length_413828_cov_18.922086,negative,325571-326260,92.74,81.3,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,,2013/11/18,184.0,,
GCF_002102345.1,43304,peregrinum,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_002102345.1_VFSEQ0001,NZ_LQPP01000013.1,positive,87769-88458,92.74,81.3,,,,,2017/4/20,184.0,,
GCF_002102345.1,43304,peregrinum,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_002102345.1_VFSEQ0002,NZ_LQPP01000016.1,negative,171610-172297,98.99,80.52,,,,,2017/4/20,184.0,,
GCF_002102345.1,43304,peregrinum,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_002102345.1_VFSEQ0003,NZ_LQPP01000016.1,positive,305327-307580,94.99,84.21,,,,,2017/4/20,184.0,,
GCF_002102345.1,43304,peregrinum,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_002102345.1_VFSEQ0004,NZ_LQPP01000043.1,positive,96383-97667,99.77,85.38,,,,,2017/4/20,184.0,,
GCF_002198105.1,43304,peregrinum,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_002198105.1_VFSEQ0001,NZ_NCSV01000001.1,positive,70313-71000,98.99,80.52,,,,,2017/6/19,184.0,,
GCF_002198105.1,43304,peregrinum,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_002198105.1_VFSEQ0002,NZ_NCSV01000022.1,negative,136089-136778,92.74,81.3,,,,,2017/6/19,184.0,,
GCF_002198105.1,43304,peregrinum,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_002198105.1_VFSEQ0003,NZ_NCSV01000027.1,negative,110558-111842,99.77,85.38,,,,,2017/6/19,184.0,,
GCF_002198105.1,43304,peregrinum,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_002198105.1_VFSEQ0004,NZ_NCSV01000030.1,negative,1079-3332,94.99,84.21,,,,,2017/6/19,184.0,,
SRR13785997,43304,peregrinum,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR13785997_VFSEQ0001,NODE_29_length_55182_cov_33.241459,negative,30195-31479,99.77,85.46,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,United States of America,2012/1/22,,,
SRR13785997,43304,peregrinum,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR13785997_VFSEQ0002,NODE_3_length_421181_cov_32.401332,negative,184601-186845,94.61,84.32,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,United States of America,2012/1/22,,,
SRR13785997,43304,peregrinum,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR13785997_VFSEQ0003,NODE_7_length_285598_cov_33.106400,negative,189299-189988,92.74,81.88,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,United States of America,2012/1/22,,,
SRR3394908,43304,peregrinum,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR3394908_VFSEQ0001,NODE_10_length_207407_cov_58.663385,positive,74319-76563,94.61,84.23,,,,South Africa,2011/1/1,198.0,,
SRR3394908,43304,peregrinum,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR3394908_VFSEQ0002,NODE_16_length_148751_cov_66.957239,negative,104919-105608,92.74,82.17,,,,South Africa,2011/1/1,198.0,,
SRR3394908,43304,peregrinum,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR3394908_VFSEQ0003,NODE_24_length_124133_cov_61.855751,negative,52211-53495,99.77,85.07,,,,South Africa,2011/1/1,198.0,,
SRR6046339,43304,peregrinum,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6046339_VFSEQ0001,NODE_155_length_8145_cov_15.338159,positive,4846-7099,94.99,84.21,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,184.0,,
SRR6046339,43304,peregrinum,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6046339_VFSEQ0002,NODE_19_length_94179_cov_16.252688,negative,52520-53209,92.74,81.3,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,184.0,,
SRR6046339,43304,peregrinum,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6046339_VFSEQ0003,NODE_40_length_57017_cov_14.782421,negative,20569-21256,98.99,80.52,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,184.0,,
SRR6046339,43304,peregrinum,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6046339_VFSEQ0004,NODE_4_length_141724_cov_15.942955,positive,29700-30984,99.77,85.38,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,184.0,,
SRR6046344,43304,peregrinum,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6046344_VFSEQ0001,NODE_104_length_25002_cov_25.905129,negative,6734-8018,99.77,85.3,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,,,
SRR6046344,43304,peregrinum,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6046344_VFSEQ0002,NODE_12_length_99532_cov_23.938363,negative,50587-51276,92.74,81.88,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,,,
SRR6046344,43304,peregrinum,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],SRR6046344_VFSEQ0003,NODE_2_length_165723_cov_19.649451,positive,59353-61597,94.61,84.41,Homo sapiens,Homo sapiens,Homo sapiens:clinical sample,United Kingdom,2016/3/31,,,