strain_accession,species_name,species_id,gene_name,card_accession,mechanism,AMR_gene_ref_strain,card_drug_class,definition,amr_seqid,contig,strand,position,coverage,identity,host,source,source_detail,country,date,MLST,subspecies_id,subspecies_name
GCF_000257725.1,phlei,1771,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_000257725.1_AMRSEG0001,NZ_AJFJ01000015.1,negative,34951-35637,100.0,85.88,,,,Netherlands,2012/4/5,100.0,,
GCF_000257725.1,phlei,1771,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_000257725.1_AMRSEG0002,NZ_AJFJ01000027.1,positive,41881-45290,97.19,81.94,,,,Netherlands,2012/4/5,100.0,,
GCF_000257725.1,phlei,1771,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_000257725.1_AMRSEG0003,NZ_AJFJ01000040.1,negative,61771-62115,100.0,88.12,,,,Netherlands,2012/4/5,100.0,,
GCF_000257725.1,phlei,1771,tap,ARO:3000343,antibiotic efflux,Mycolicibacterium fortuitum,tetracycline antibiotic,"Efflux pump proteins contained within Mycobacterial genomes which confer resistance to a number of different antibiotics including aminoglycosides, and tetracyclines.",GCF_000257725.1_AMRSEG0004,NZ_AJFJ01000060.1,positive,5948-7160,98.37,81.91,,,,Netherlands,2012/4/5,100.0,,
GCF_001581995.1,phlei,1771,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_001581995.1_AMRSEG0001,NZ_ATDR01000023.1,negative,265682-269091,97.19,82.09,,,,,2016/3/8,50.0,,
GCF_001581995.1,phlei,1771,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_001581995.1_AMRSEG0002,NZ_ATDR01000045.1,negative,286418-286762,100.0,88.12,,,,,2016/3/8,50.0,,
GCF_001581995.1,phlei,1771,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_001581995.1_AMRSEG0003,NZ_ATDR01000056.1,negative,135883-136569,100.0,85.88,,,,,2016/3/8,50.0,,
GCF_001581995.1,phlei,1771,tap,ARO:3000343,antibiotic efflux,Mycolicibacterium fortuitum,tetracycline antibiotic,"Efflux pump proteins contained within Mycobacterial genomes which confer resistance to a number of different antibiotics including aminoglycosides, and tetracyclines.",GCF_001581995.1_AMRSEG0004,NZ_ATDR01000084.1,positive,3786-4998,98.37,82.07,,,,,2016/3/8,50.0,,
GCF_001582005.1,phlei,1771,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_001582005.1_AMRSEG0001,NZ_ATHW01000028.1,negative,78491-78835,100.0,88.12,,,,,2016/3/8,50.0,,
GCF_001582005.1,phlei,1771,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_001582005.1_AMRSEG0002,NZ_ATHW01000030.1,positive,127391-128077,100.0,85.88,,,,,2016/3/8,50.0,,
GCF_001582005.1,phlei,1771,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_001582005.1_AMRSEG0003,NZ_ATHW01000041.1,negative,143405-146814,97.19,82.09,,,,,2016/3/8,50.0,,
GCF_001582005.1,phlei,1771,tap,ARO:3000343,antibiotic efflux,Mycolicibacterium fortuitum,tetracycline antibiotic,"Efflux pump proteins contained within Mycobacterial genomes which confer resistance to a number of different antibiotics including aminoglycosides, and tetracyclines.",GCF_001582005.1_AMRSEG0004,NZ_ATHW01000046.1,positive,5762-6974,98.37,82.07,,,,,2016/3/8,50.0,,
GCF_001582015.1,phlei,1771,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_001582015.1_AMRSEG0001,NZ_ANBO01000023.1,negative,137465-138151,100.0,85.88,,,,,2016/3/8,50.0,,
GCF_001582015.1,phlei,1771,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_001582015.1_AMRSEG0002,NZ_ANBO01000043.1,positive,6853-7197,100.0,88.12,,,,,2016/3/8,50.0,,
GCF_001582015.1,phlei,1771,tap,ARO:3000343,antibiotic efflux,Mycolicibacterium fortuitum,tetracycline antibiotic,"Efflux pump proteins contained within Mycobacterial genomes which confer resistance to a number of different antibiotics including aminoglycosides, and tetracyclines.",GCF_001582015.1_AMRSEG0003,NZ_ANBO01000044.1,negative,215843-217055,98.37,82.07,,,,,2016/3/8,50.0,,
GCF_001582015.1,phlei,1771,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_001582015.1_AMRSEG0004,NZ_ANBO01000045.1,positive,59337-62746,97.19,82.09,,,,,2016/3/8,50.0,,
GCF_001582025.1,phlei,1771,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_001582025.1_AMRSEG0001,NZ_JPUH01000002.1,negative,96608-100017,97.19,82.09,,,,,2016/3/8,50.0,,
GCF_001582025.1,phlei,1771,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_001582025.1_AMRSEG0002,NZ_JPUH01000026.1,negative,3742-4428,100.0,85.88,,,,,2016/3/8,50.0,,
GCF_001582025.1,phlei,1771,tap,ARO:3000343,antibiotic efflux,Mycolicibacterium fortuitum,tetracycline antibiotic,"Efflux pump proteins contained within Mycobacterial genomes which confer resistance to a number of different antibiotics including aminoglycosides, and tetracyclines.",GCF_001582025.1_AMRSEG0003,NZ_JPUH01000158.1,negative,339-1551,98.37,82.07,,,,,2016/3/8,50.0,,
GCF_001582025.1,phlei,1771,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_001582025.1_AMRSEG0004,NZ_JPUH01000163.1,negative,3495-3839,100.0,88.12,,,,,2016/3/8,50.0,,
GCF_001583415.1,phlei,1771,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_001583415.1_AMRSEG0001,NZ_CP014475.1,positive,1290370-1293779,97.19,82.09,Environment,Environment: wild environment,Environment:Wild environment:environment,,2016/3/8,50.0,,
GCF_001583415.1,phlei,1771,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_001583415.1_AMRSEG0002,NZ_CP014475.1,positive,1709174-1709860,100.0,85.88,Environment,Environment: wild environment,Environment:Wild environment:environment,,2016/3/8,50.0,,
GCF_001583415.1,phlei,1771,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_001583415.1_AMRSEG0003,NZ_CP014475.1,negative,2629452-2629796,100.0,88.12,Environment,Environment: wild environment,Environment:Wild environment:environment,,2016/3/8,50.0,,
GCF_001583415.1,phlei,1771,tap,ARO:3000343,antibiotic efflux,Mycolicibacterium fortuitum,tetracycline antibiotic,"Efflux pump proteins contained within Mycobacterial genomes which confer resistance to a number of different antibiotics including aminoglycosides, and tetracyclines.",GCF_001583415.1_AMRSEG0004,NZ_CP014475.1,positive,4090821-4092033,98.37,82.07,Environment,Environment: wild environment,Environment:Wild environment:environment,,2016/3/8,50.0,,
GCF_015333575.1,phlei,1771,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_015333575.1_AMRSEG0001,NZ_AJFH01000006.1,positive,40716-44125,97.19,81.94,,,,,2020/11/10,100.0,,
GCF_015333575.1,phlei,1771,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_015333575.1_AMRSEG0002,NZ_AJFH01000010.1,negative,61558-61902,100.0,88.12,,,,,2020/11/10,100.0,,
GCF_015333575.1,phlei,1771,tap,ARO:3000343,antibiotic efflux,Mycolicibacterium fortuitum,tetracycline antibiotic,"Efflux pump proteins contained within Mycobacterial genomes which confer resistance to a number of different antibiotics including aminoglycosides, and tetracyclines.",GCF_015333575.1_AMRSEG0003,NZ_AJFH01000018.1,positive,5750-6962,98.37,81.91,,,,,2020/11/10,100.0,,
GCF_015333575.1,phlei,1771,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_015333575.1_AMRSEG0004,NZ_AJFH01000097.1,negative,34922-35608,100.0,85.88,,,,,2020/11/10,100.0,,
GCF_900453675.1,phlei,1771,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_900453675.1_AMRSEG0001,NZ_UGQI01000001.1,positive,1300866-1304275,97.19,82.09,,,,,2018/8/1,50.0,,
GCF_900453675.1,phlei,1771,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_900453675.1_AMRSEG0002,NZ_UGQI01000001.1,positive,1719691-1720377,100.0,85.88,,,,,2018/8/1,50.0,,
GCF_900453675.1,phlei,1771,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_900453675.1_AMRSEG0003,NZ_UGQI01000001.1,negative,2638958-2639302,100.0,88.12,,,,,2018/8/1,50.0,,
GCF_900453675.1,phlei,1771,tap,ARO:3000343,antibiotic efflux,Mycolicibacterium fortuitum,tetracycline antibiotic,"Efflux pump proteins contained within Mycobacterial genomes which confer resistance to a number of different antibiotics including aminoglycosides, and tetracyclines.",GCF_900453675.1_AMRSEG0004,NZ_UGQI01000001.1,positive,4033146-4034358,98.37,82.07,,,,,2018/8/1,50.0,,