strain_accession,species_id,species_name,vfg_id,gene_name,genbank_id,vf_id,vf_name,vf_full_name,vfc_id,vfc_name,source_organism,source_strain,vf_seqid,contig_name,strand,position,coverage,identity,host,source,source_detail,country,date,MLST,subspecies_id,subspecies_name
GCA_000612885.1,39693,porcinum,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCA_000612885.1_VFSEQ0001,CCBG010000001.1,negative,1322958-1324242,99.77,86.0,,,,,2014/3/31,212.0,,
GCA_000612885.1,39693,porcinum,VFG002382,eccCa1,NP_218387,VF0315,ESX-1,ESAT-6 secretion system-1,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCA_000612885.1_VFSEQ0002,CCBG010000001.1,positive,2436521-2438616,92.96,80.04,,,,,2014/3/31,212.0,,
GCA_000612885.1,39693,porcinum,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCA_000612885.1_VFSEQ0003,CCBG010000001.1,negative,3067287-3069539,94.9,83.5,,,,,2014/3/31,212.0,,
GCA_000612885.1,39693,porcinum,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCA_000612885.1_VFSEQ0004,CCBG010000001.1,positive,3245874-3246561,98.99,81.82,,,,,2014/3/31,212.0,,
GCA_000612885.1,39693,porcinum,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCA_000612885.1_VFSEQ0005,CCBG010000002.1,positive,1227208-1227897,92.74,81.01,,,,,2014/3/31,212.0,,
GCA_000612885.1,39693,porcinum,VFG001818,mbtH,NP_216893,VF0299,Mycobactin,,VFC0272,Nutritional/Metabolic factor,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCA_000612885.1_VFSEQ0006,CCBG010000002.1,positive,2646880-2647083,94.44,81.86,,,,,2014/3/31,212.0,,
GCF_001686675.1,39693,porcinum,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686675.1_VFSEQ0001,NZ_MBDY01000028.1,negative,143900-144589,92.74,81.3,,,,Uganda,2016/7/15,120.0,,
GCF_001686675.1,39693,porcinum,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686675.1_VFSEQ0002,NZ_MBDY01000054.1,positive,76517-77801,99.77,86.24,,,,Uganda,2016/7/15,120.0,,
GCF_001686675.1,39693,porcinum,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686675.1_VFSEQ0003,NZ_MBDY01000063.1,negative,10410-11097,98.99,81.53,,,,Uganda,2016/7/15,120.0,,
GCF_001686675.1,39693,porcinum,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686675.1_VFSEQ0004,NZ_MBDY01000063.1,positive,197688-199940,94.9,83.67,,,,Uganda,2016/7/15,120.0,,
GCF_001686675.1,39693,porcinum,VFG001818,mbtH,NP_216893,VF0299,Mycobactin,,VFC0272,Nutritional/Metabolic factor,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686675.1_VFSEQ0005,NZ_MBDY01000081.1,negative,60509-60712,94.44,81.37,,,,Uganda,2016/7/15,120.0,,
GCF_001686755.1,39693,porcinum,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686755.1_VFSEQ0001,NZ_MBEF01000017.1,positive,8323-9607,99.77,86.16,,,,Uganda,2016/7/15,161.0,,
GCF_001686755.1,39693,porcinum,VFG002382,eccCa1,NP_218387,VF0315,ESX-1,ESAT-6 secretion system-1,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686755.1_VFSEQ0002,NZ_MBEF01000027.1,positive,266289-268386,93.18,80.03,,,,Uganda,2016/7/15,161.0,,
GCF_001686755.1,39693,porcinum,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686755.1_VFSEQ0003,NZ_MBEF01000074.1,negative,63741-64428,98.99,81.96,,,,Uganda,2016/7/15,161.0,,
GCF_001686755.1,39693,porcinum,VFG001818,mbtH,NP_216893,VF0299,Mycobactin,,VFC0272,Nutritional/Metabolic factor,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686755.1_VFSEQ0004,NZ_MBEF01000075.1,positive,155677-155880,94.44,80.88,,,,Uganda,2016/7/15,161.0,,
GCF_001686755.1,39693,porcinum,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686755.1_VFSEQ0005,NZ_MBEF01000082.1,positive,68002-68691,92.74,81.3,,,,Uganda,2016/7/15,161.0,,
GCF_001686755.1,39693,porcinum,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686755.1_VFSEQ0006,NZ_MBEF01000105.1,negative,66059-68311,94.9,83.5,,,,Uganda,2016/7/15,161.0,,
GCF_001686835.1,39693,porcinum,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686835.1_VFSEQ0001,NZ_MBEG01000012.1,positive,98062-98751,92.74,81.59,,,,Uganda,2016/7/15,77.0,,
GCF_001686835.1,39693,porcinum,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686835.1_VFSEQ0002,NZ_MBEG01000016.1,positive,70581-71268,98.99,81.82,,,,Uganda,2016/7/15,77.0,,
GCF_001686835.1,39693,porcinum,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686835.1_VFSEQ0003,NZ_MBEG01000031.1,negative,61509-63761,94.9,83.63,,,,Uganda,2016/7/15,77.0,,
GCF_001686835.1,39693,porcinum,VFG002382,eccCa1,NP_218387,VF0315,ESX-1,ESAT-6 secretion system-1,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686835.1_VFSEQ0004,NZ_MBEG01000035.1,negative,81498-83601,93.58,80.01,,,,Uganda,2016/7/15,77.0,,
GCF_001686835.1,39693,porcinum,VFG001818,mbtH,NP_216893,VF0299,Mycobactin,,VFC0272,Nutritional/Metabolic factor,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686835.1_VFSEQ0005,NZ_MBEG01000073.1,positive,196295-196498,94.44,80.88,,,,Uganda,2016/7/15,77.0,,
GCF_001686835.1,39693,porcinum,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686835.1_VFSEQ0006,NZ_MBEG01000077.1,negative,128832-130116,99.77,86.0,,,,Uganda,2016/7/15,77.0,,
GCF_001686845.1,39693,porcinum,VFG002382,eccCa1,NP_218387,VF0315,ESX-1,ESAT-6 secretion system-1,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686845.1_VFSEQ0001,NZ_MBEH01000002.1,positive,7120-9223,93.58,80.01,,,,Uganda,2016/7/15,77.0,,
GCF_001686845.1,39693,porcinum,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686845.1_VFSEQ0002,NZ_MBEH01000048.1,negative,128834-130118,99.77,86.0,,,,Uganda,2016/7/15,77.0,,
GCF_001686845.1,39693,porcinum,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686845.1_VFSEQ0003,NZ_MBEH01000052.1,negative,61452-63704,94.9,83.63,,,,Uganda,2016/7/15,77.0,,
GCF_001686845.1,39693,porcinum,VFG001818,mbtH,NP_216893,VF0299,Mycobactin,,VFC0272,Nutritional/Metabolic factor,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686845.1_VFSEQ0004,NZ_MBEH01000059.1,positive,196351-196554,94.44,80.88,,,,Uganda,2016/7/15,77.0,,
GCF_001686845.1,39693,porcinum,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686845.1_VFSEQ0005,NZ_MBEH01000072.1,positive,98062-98751,92.74,81.59,,,,Uganda,2016/7/15,77.0,,
GCF_001686845.1,39693,porcinum,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001686845.1_VFSEQ0006,NZ_MBEH01000096.1,positive,70600-71287,98.99,81.82,,,,Uganda,2016/7/15,77.0,,
GCF_001722425.1,39693,porcinum,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001722425.1_VFSEQ0001,NZ_MIHF01000080.1,negative,17590-18875,99.84,86.17,Homo sapiens,Homo sapiens: extrapulmonary,Homo sapiens:extrapulmonary :blood,United States of America,2016/9/9,553.0,,
GCF_001722425.1,39693,porcinum,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001722425.1_VFSEQ0002,NZ_MIHF01000086.1,positive,5929-6616,98.99,81.82,Homo sapiens,Homo sapiens: extrapulmonary,Homo sapiens:extrapulmonary :blood,United States of America,2016/9/9,553.0,,
GCF_001722425.1,39693,porcinum,VFG001818,mbtH,NP_216893,VF0299,Mycobactin,,VFC0272,Nutritional/Metabolic factor,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001722425.1_VFSEQ0003,NZ_MIHF01000098.1,positive,2940-3143,94.44,81.86,Homo sapiens,Homo sapiens: extrapulmonary,Homo sapiens:extrapulmonary :blood,United States of America,2016/9/9,553.0,,
GCF_001722425.1,39693,porcinum,VFG002382,eccCa1,NP_218387,VF0315,ESX-1,ESAT-6 secretion system-1,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001722425.1_VFSEQ0004,NZ_MIHF01000118.1,negative,11445-13542,93.23,80.07,Homo sapiens,Homo sapiens: extrapulmonary,Homo sapiens:extrapulmonary :blood,United States of America,2016/9/9,553.0,,
GCF_001722425.1,39693,porcinum,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001722425.1_VFSEQ0005,NZ_MIHF01000318.1,positive,4875-5564,92.74,81.59,Homo sapiens,Homo sapiens: extrapulmonary,Homo sapiens:extrapulmonary :blood,United States of America,2016/9/9,553.0,,
GCF_001722425.1,39693,porcinum,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_001722425.1_VFSEQ0006,NZ_MIHF01000375.1,negative,1588-3533,81.96,83.97,Homo sapiens,Homo sapiens: extrapulmonary,Homo sapiens:extrapulmonary :blood,United States of America,2016/9/9,553.0,,
GCF_002086835.1,39693,porcinum,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_002086835.1_VFSEQ0001,NZ_MVIG01000003.1,negative,472490-473179,92.74,81.01,,,,,2017/4/11,212.0,,
GCF_002086835.1,39693,porcinum,VFG001818,mbtH,NP_216893,VF0299,Mycobactin,,VFC0272,Nutritional/Metabolic factor,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_002086835.1_VFSEQ0002,NZ_MVIG01000004.1,negative,121905-122108,94.44,81.86,,,,,2017/4/11,212.0,,
GCF_002086835.1,39693,porcinum,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_002086835.1_VFSEQ0003,NZ_MVIG01000005.1,negative,202883-204167,99.77,86.0,,,,,2017/4/11,212.0,,
GCF_002086835.1,39693,porcinum,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_002086835.1_VFSEQ0004,NZ_MVIG01000008.1,negative,71685-73937,94.9,83.5,,,,,2017/4/11,212.0,,
GCF_002086835.1,39693,porcinum,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_002086835.1_VFSEQ0005,NZ_MVIG01000008.1,positive,250327-251014,98.99,81.82,,,,,2017/4/11,212.0,,
GCF_002086835.1,39693,porcinum,VFG002382,eccCa1,NP_218387,VF0315,ESX-1,ESAT-6 secretion system-1,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_002086835.1_VFSEQ0006,NZ_MVIG01000023.1,positive,7123-9218,92.96,80.04,,,,,2017/4/11,212.0,,