strain_accession,species_id,species_name,vfg_id,gene_name,genbank_id,vf_id,vf_name,vf_full_name,vfc_id,vfc_name,source_organism,source_strain,vf_seqid,contig_name,strand,position,coverage,identity,host,source,source_detail,country,date,MLST,subspecies_id,subspecies_name
DRR205177,722731,shigaense,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205177_VFSEQ0001,NODE_10_length_192995_cov_83.526647,negative,2978-5333,99.28,87.44,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2018/12/24,592.0,,
DRR205177,722731,shigaense,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205177_VFSEQ0002,NODE_10_length_192995_cov_83.526647,positive,132673-133368,100.0,87.5,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2018/12/24,592.0,,
DRR205177,722731,shigaense,VFG002399,Rv1794,NP_216310,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205177_VFSEQ0003,NODE_11_length_181333_cov_85.604314,positive,153-1051,99.56,82.31,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2018/12/24,592.0,,
DRR205177,722731,shigaense,VFG002395,eccC5,YP_007410461,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205177_VFSEQ0004,NODE_14_length_161271_cov_86.526965,negative,2354-5136,99.32,84.94,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2018/12/24,592.0,,
DRR205177,722731,shigaense,VFG002395,eccC5,YP_007410461,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205177_VFSEQ0005,NODE_14_length_161271_cov_86.526965,negative,5209-6512,99.69,83.67,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2018/12/24,592.0,,
DRR205177,722731,shigaense,VFG001419,fbpA,NP_218321,VF0311,Antigen 85,,VFC0001,Adherence,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205177_VFSEQ0006,NODE_2_length_518937_cov_85.133289,negative,135074-136069,97.94,81.43,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2018/12/24,592.0,,
DRR205177,722731,shigaense,VFG002382,eccCa1,NP_218387,VF0315,ESX-1,ESAT-6 secretion system-1,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205177_VFSEQ0007,NODE_2_length_518937_cov_85.133289,positive,197177-199283,93.63,80.49,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2018/12/24,592.0,,
DRR205177,722731,shigaense,VFG001383,hbhA,NP_214989,VF0313,HbhA,,VFC0001,Adherence,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205177_VFSEQ0008,NODE_3_length_507938_cov_84.505422,negative,59838-60440,99.5,82.34,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2018/12/24,592.0,,
DRR205177,722731,shigaense,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205177_VFSEQ0009,NODE_3_length_507938_cov_84.505422,negative,66498-67782,99.84,87.78,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2018/12/24,592.0,,
DRR205177,722731,shigaense,VFG022098,esxH,NP_214802,VF0521,ESX-3,,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205177_VFSEQ0010,NODE_3_length_507938_cov_84.505422,negative,264527-264817,100.0,82.13,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2018/12/24,592.0,,
DRR205177,722731,shigaense,VFG022340,esxG,NP_214801,VF0521,ESX-3,,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205177_VFSEQ0011,NODE_3_length_507938_cov_84.505422,negative,264848-265141,100.0,80.27,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2018/12/24,592.0,,
DRR205177,722731,shigaense,VFG022066,PE5,YP_177710,VF0521,ESX-3,,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205177_VFSEQ0012,NODE_3_length_507938_cov_84.505422,negative,266704-267012,100.0,81.55,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2018/12/24,592.0,,
DRR205177,722731,shigaense,VFG022051,eccC3,NP_214798,VF0521,ESX-3,,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205177_VFSEQ0013,NODE_3_length_507938_cov_84.505422,negative,267024-271006,99.42,81.08,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2018/12/24,592.0,,
DRR205177,722731,shigaense,VFG001811,fbpC,YP_177694,VF0311,Antigen 85,,VFC0001,Adherence,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205177_VFSEQ0014,NODE_3_length_507938_cov_84.505422,positive,506784-507789,98.14,84.39,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2018/12/24,592.0,,
DRR205177,722731,shigaense,VFG002400,esxN,YP_177838,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205177_VFSEQ0015,NODE_58_length_533_cov_175.159574,positive,251-533,99.3,87.99,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2018/12/24,592.0,,
DRR205177,722731,shigaense,VFG001819,mbtG,NP_216894,VF0299,Mycobactin,,VFC0272,Nutritional/Metabolic factor,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205177_VFSEQ0016,NODE_8_length_223460_cov_85.536131,positive,138585-139801,93.9,84.63,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2018/12/24,592.0,,
DRR205177,722731,shigaense,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205177_VFSEQ0017,NODE_9_length_223376_cov_88.087823,negative,220913-221627,96.1,84.96,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2018/12/24,592.0,,
DRR205178,722731,shigaense,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205178_VFSEQ0001,NODE_10_length_181349_cov_102.392799,negative,2978-5333,99.28,87.39,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2019/1/7,592.0,,
DRR205178,722731,shigaense,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205178_VFSEQ0002,NODE_10_length_181349_cov_102.392799,positive,121144-121839,100.0,87.5,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2019/1/7,592.0,,
DRR205178,722731,shigaense,VFG002399,Rv1794,NP_216310,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205178_VFSEQ0003,NODE_11_length_181334_cov_105.528165,negative,180288-181186,99.56,82.31,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2019/1/7,592.0,,
DRR205178,722731,shigaense,VFG002395,eccC5,YP_007410461,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205178_VFSEQ0004,NODE_13_length_155052_cov_105.245508,positive,148534-149837,99.69,83.67,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2019/1/7,592.0,,
DRR205178,722731,shigaense,VFG002395,eccC5,YP_007410461,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205178_VFSEQ0005,NODE_13_length_155052_cov_105.245508,positive,149910-152692,99.32,84.94,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2019/1/7,592.0,,
DRR205178,722731,shigaense,VFG002382,eccCa1,NP_218387,VF0315,ESX-1,ESAT-6 secretion system-1,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205178_VFSEQ0006,NODE_1_length_646620_cov_104.555226,negative,327536-329642,93.63,80.49,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2019/1/7,592.0,,
DRR205178,722731,shigaense,VFG001419,fbpA,NP_218321,VF0311,Antigen 85,,VFC0001,Adherence,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205178_VFSEQ0007,NODE_1_length_646620_cov_104.555226,positive,390739-391734,97.94,81.53,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2019/1/7,592.0,,
DRR205178,722731,shigaense,VFG001383,hbhA,NP_214989,VF0313,HbhA,,VFC0001,Adherence,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205178_VFSEQ0008,NODE_3_length_553809_cov_102.519897,negative,105188-105805,100.0,81.07,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2019/1/7,592.0,,
DRR205178,722731,shigaense,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205178_VFSEQ0009,NODE_3_length_553809_cov_102.519897,negative,111863-113147,99.84,87.78,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2019/1/7,592.0,,
DRR205178,722731,shigaense,VFG022098,esxH,NP_214802,VF0521,ESX-3,,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205178_VFSEQ0010,NODE_3_length_553809_cov_102.519897,negative,310295-310585,100.0,82.13,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2019/1/7,592.0,,
DRR205178,722731,shigaense,VFG022340,esxG,NP_214801,VF0521,ESX-3,,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205178_VFSEQ0011,NODE_3_length_553809_cov_102.519897,negative,310616-310909,100.0,80.27,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2019/1/7,592.0,,
DRR205178,722731,shigaense,VFG022066,PE5,YP_177710,VF0521,ESX-3,,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205178_VFSEQ0012,NODE_3_length_553809_cov_102.519897,negative,312472-312780,100.0,81.88,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2019/1/7,592.0,,
DRR205178,722731,shigaense,VFG022051,eccC3,NP_214798,VF0521,ESX-3,,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205178_VFSEQ0013,NODE_3_length_553809_cov_102.519897,negative,312792-316774,99.42,81.15,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2019/1/7,592.0,,
DRR205178,722731,shigaense,VFG001811,fbpC,YP_177694,VF0311,Antigen 85,,VFC0001,Adherence,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205178_VFSEQ0014,NODE_3_length_553809_cov_102.519897,positive,552649-553654,98.14,84.49,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2019/1/7,592.0,,
DRR205178,722731,shigaense,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205178_VFSEQ0015,NODE_5_length_449070_cov_105.464993,negative,446643-447357,96.1,84.96,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2019/1/7,592.0,,
DRR205178,722731,shigaense,VFG002400,esxN,YP_177838,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205178_VFSEQ0016,NODE_60_length_537_cov_199.101266,positive,251-535,100.0,88.07,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2019/1/7,592.0,,
DRR205178,722731,shigaense,VFG001819,mbtG,NP_216894,VF0299,Mycobactin,,VFC0272,Nutritional/Metabolic factor,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],DRR205178_VFSEQ0017,NODE_7_length_236897_cov_105.737077,positive,138074-139357,99.07,83.29,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Japan,2019/1/7,592.0,,
GCF_003515645.1,722731,shigaense,VFG001811,fbpC,YP_177694,VF0311,Antigen 85,,VFC0001,Adherence,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_003515645.1_VFSEQ0001,NZ_CP022927.1,negative,268569-269574,98.14,84.49,,,,,2018/9/10,781.0,,
GCF_003515645.1,722731,shigaense,VFG022051,eccC3,NP_214798,VF0521,ESX-3,,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_003515645.1_VFSEQ0002,NZ_CP022927.1,positive,503596-507578,99.42,81.0,,,,,2018/9/10,781.0,,
GCF_003515645.1,722731,shigaense,VFG022066,PE5,YP_177710,VF0521,ESX-3,,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_003515645.1_VFSEQ0003,NZ_CP022927.1,positive,507590-507894,98.71,81.31,,,,,2018/9/10,781.0,,
GCF_003515645.1,722731,shigaense,VFG022340,esxG,NP_214801,VF0521,ESX-3,,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_003515645.1_VFSEQ0004,NZ_CP022927.1,positive,509485-509778,100.0,80.27,,,,,2018/9/10,781.0,,
GCF_003515645.1,722731,shigaense,VFG022098,esxH,NP_214802,VF0521,ESX-3,,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_003515645.1_VFSEQ0005,NZ_CP022927.1,positive,509809-510099,100.0,82.13,,,,,2018/9/10,781.0,,
GCF_003515645.1,722731,shigaense,VFG001381,icl,YP_177728,VF0253,Isocitrate lyase,,VFC0346,Others,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_003515645.1_VFSEQ0006,NZ_CP022927.1,positive,706960-708244,99.84,87.86,,,,,2018/9/10,781.0,,
GCF_003515645.1,722731,shigaense,VFG001383,hbhA,NP_214989,VF0313,HbhA,,VFC0001,Adherence,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_003515645.1_VFSEQ0007,NZ_CP022927.1,positive,714302-714904,99.5,82.01,,,,,2018/9/10,781.0,,
GCF_003515645.1,722731,shigaense,VFG001406,ideR,NP_217227,VF0300,IdeR,Iron-dependent regulator,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_003515645.1_VFSEQ0008,NZ_CP022927.1,negative,1906592-1907287,100.0,87.5,,,,,2018/9/10,781.0,,
GCF_003515645.1,722731,shigaense,VFG001826,relA,NP_217099,VF0287,RelA,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_003515645.1_VFSEQ0009,NZ_CP022927.1,positive,2023149-2025504,99.28,87.39,,,,,2018/9/10,781.0,,
GCF_003515645.1,722731,shigaense,VFG002395,eccC5,YP_007410461,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_003515645.1_VFSEQ0010,NZ_CP022927.1,positive,2687683-2688986,99.69,83.67,,,,,2018/9/10,781.0,,
GCF_003515645.1,722731,shigaense,VFG002395,eccC5,YP_007410461,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_003515645.1_VFSEQ0011,NZ_CP022927.1,positive,2689059-2691841,99.32,84.94,,,,,2018/9/10,781.0,,
GCF_003515645.1,722731,shigaense,VFG002394,esxM,,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_003515645.1_VFSEQ0012,NZ_CP022927.1,positive,2700693-2700989,99.66,81.21,,,,,2018/9/10,781.0,,
GCF_003515645.1,722731,shigaense,VFG002400,esxN,YP_177838,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_003515645.1_VFSEQ0013,NZ_CP022927.1,positive,2701039-2701323,100.0,88.07,,,,,2018/9/10,781.0,,
GCF_003515645.1,722731,shigaense,VFG002399,Rv1794,NP_216310,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_003515645.1_VFSEQ0014,NZ_CP022927.1,positive,2701411-2702309,99.56,82.31,,,,,2018/9/10,781.0,,
GCF_003515645.1,722731,shigaense,VFG001819,mbtG,NP_216894,VF0299,Mycobactin,,VFC0272,Nutritional/Metabolic factor,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_003515645.1_VFSEQ0015,NZ_CP022927.1,negative,3538552-3539835,99.07,83.37,,,,,2018/9/10,781.0,,
GCF_003515645.1,722731,shigaense,VFG002394,esxM,,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_003515645.1_VFSEQ0016,NZ_CP022927.1,positive,4224586-4224882,99.66,80.2,,,,,2018/9/10,781.0,,
GCF_003515645.1,722731,shigaense,VFG002400,esxN,YP_177838,VF0402,ESX-5,ESAT-like secretion system,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_003515645.1_VFSEQ0017,NZ_CP022927.1,positive,4224933-4225215,99.3,87.63,,,,,2018/9/10,781.0,,
GCF_003515645.1,722731,shigaense,VFG001386,phoP,NP_215271,VF0286,PhoP,,VFC0301,Regulation,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_003515645.1_VFSEQ0018,NZ_CP022927.1,negative,4677348-4678062,96.1,84.96,,,,,2018/9/10,781.0,,
GCF_003515645.1,722731,shigaense,VFG001419,fbpA,NP_218321,VF0311,Antigen 85,,VFC0001,Adherence,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_003515645.1_VFSEQ0019,NZ_CP022927.1,negative,5092451-5093446,97.94,81.22,,,,,2018/9/10,781.0,,
GCF_003515645.1,722731,shigaense,VFG002382,eccCa1,NP_218387,VF0315,ESX-1,ESAT-6 secretion system-1,VFC0086,Effector delivery system,Mycobacterium tuberculosis,[Mycobacterium tuberculosis H37Rv],GCF_003515645.1_VFSEQ0020,NZ_CP022927.1,positive,5154556-5156662,93.63,80.49,,,,,2018/9/10,781.0,,