strain_accession,species_name,species_id,gene_name,card_accession,mechanism,AMR_gene_ref_strain,card_drug_class,definition,amr_seqid,contig,strand,position,coverage,identity,host,source,source_detail,country,date,MLST,subspecies_id,subspecies_name
DRR207752,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,DRR207752_AMRSEG0001,NODE_16_length_149070_cov_66.170120,positive,75031-76290,100.0,99.84,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207752,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,DRR207752_AMRSEG0002,NODE_19_length_125232_cov_64.962946,positive,62998-64158,100.0,99.91,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207752,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,DRR207752_AMRSEG0003,NODE_25_length_98072_cov_70.169342,negative,30598-32112,100.0,99.41,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207752,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,DRR207752_AMRSEG0004,NODE_26_length_89719_cov_64.238668,negative,82002-82688,100.0,84.28,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207752,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,DRR207752_AMRSEG0005,NODE_33_length_72784_cov_73.289036,negative,26557-26988,100.0,100.0,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207752,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",DRR207752_AMRSEG0006,NODE_39_length_60771_cov_70.281100,negative,15613-19098,98.94,81.03,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207752,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,DRR207752_AMRSEG0007,NODE_4_length_274170_cov_80.759390,positive,182846-183478,100.0,99.21,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207752,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,DRR207752_AMRSEG0008,NODE_9_length_208911_cov_60.795703,negative,105067-105411,100.0,99.71,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207753,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,DRR207753_AMRSEG0001,NODE_18_length_133447_cov_66.778564,negative,72733-73992,100.0,99.84,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207753,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,DRR207753_AMRSEG0002,NODE_1_length_797798_cov_81.015743,negative,215582-216214,100.0,99.21,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207753,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,DRR207753_AMRSEG0003,NODE_1_length_797798_cov_81.015743,positive,581585-582217,100.0,99.21,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207753,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,DRR207753_AMRSEG0004,NODE_21_length_125234_cov_66.251712,negative,61075-62235,100.0,99.91,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207753,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,DRR207753_AMRSEG0005,NODE_26_length_98072_cov_70.340316,positive,65961-67475,100.0,99.41,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207753,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,DRR207753_AMRSEG0006,NODE_27_length_89719_cov_64.871464,positive,7032-7718,100.0,84.28,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207753,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,DRR207753_AMRSEG0007,NODE_33_length_72783_cov_77.508952,positive,45797-46228,100.0,100.0,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207753,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",DRR207753_AMRSEG0008,NODE_41_length_60840_cov_71.606529,positive,41743-45228,98.94,81.03,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207753,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,DRR207753_AMRSEG0009,NODE_9_length_208911_cov_63.090056,negative,105067-105411,100.0,99.71,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207754,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,DRR207754_AMRSEG0001,NODE_11_length_208911_cov_72.910002,positive,103501-103845,100.0,99.71,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207754,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,DRR207754_AMRSEG0002,NODE_16_length_147503_cov_75.040640,positive,75031-76290,100.0,99.84,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207754,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,DRR207754_AMRSEG0003,NODE_19_length_125235_cov_73.484965,positive,63001-64161,100.0,99.91,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207754,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,DRR207754_AMRSEG0004,NODE_1_length_398261_cov_89.438315,negative,215582-216214,100.0,99.21,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207754,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,DRR207754_AMRSEG0005,NODE_23_length_98072_cov_78.787468,negative,30598-32112,100.0,99.41,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207754,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,DRR207754_AMRSEG0006,NODE_25_length_89719_cov_74.191064,negative,82002-82688,100.0,84.28,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207754,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,DRR207754_AMRSEG0007,NODE_31_length_73199_cov_88.905970,positive,45797-46228,100.0,100.0,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207754,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",DRR207754_AMRSEG0008,NODE_5_length_253668_cov_78.790497,positive,41674-45159,98.94,81.03,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207755,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,DRR207755_AMRSEG0001,NODE_16_length_149052_cov_73.609884,positive,75031-76290,100.0,99.84,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207755,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,DRR207755_AMRSEG0002,NODE_20_length_125234_cov_72.252215,positive,63000-64160,100.0,99.91,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207755,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,DRR207755_AMRSEG0003,NODE_24_length_98072_cov_76.460050,negative,30598-32112,100.0,99.41,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207755,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,DRR207755_AMRSEG0004,NODE_25_length_89719_cov_72.345097,positive,7032-7718,100.0,84.28,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207755,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,DRR207755_AMRSEG0005,NODE_2_length_399468_cov_86.223700,positive,183255-183887,100.0,99.21,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207755,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,DRR207755_AMRSEG0006,NODE_31_length_72784_cov_81.169731,positive,45797-46228,100.0,100.0,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207755,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",DRR207755_AMRSEG0007,NODE_39_length_60771_cov_76.781380,negative,15613-19098,98.94,81.03,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207755,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,DRR207755_AMRSEG0008,NODE_8_length_208911_cov_70.004913,positive,103501-103845,100.0,99.71,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207756,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,DRR207756_AMRSEG0001,NODE_10_length_208911_cov_69.642199,negative,105067-105411,100.0,99.71,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207756,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,DRR207756_AMRSEG0002,NODE_18_length_133487_cov_73.529035,negative,72794-74053,100.0,99.84,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207756,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,DRR207756_AMRSEG0003,NODE_20_length_125232_cov_72.032244,negative,61075-62235,100.0,99.91,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207756,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,DRR207756_AMRSEG0004,NODE_23_length_98072_cov_77.638523,positive,65961-67475,100.0,99.41,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207756,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,DRR207756_AMRSEG0005,NODE_25_length_89719_cov_71.985478,negative,82002-82688,100.0,84.28,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207756,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,DRR207756_AMRSEG0006,NODE_34_length_72784_cov_81.801790,positive,45797-46228,100.0,100.0,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207756,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,DRR207756_AMRSEG0007,NODE_3_length_341265_cov_87.783111,positive,183255-183887,100.0,99.21,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207756,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",DRR207756_AMRSEG0008,NODE_5_length_253526_cov_77.046350,negative,208368-211853,98.94,81.03,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207757,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,DRR207757_AMRSEG0001,NODE_19_length_125235_cov_56.203097,positive,63001-64161,100.0,99.91,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207757,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,DRR207757_AMRSEG0002,NODE_1_length_443342_cov_60.740457,positive,75031-76290,100.0,99.84,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207757,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,DRR207757_AMRSEG0003,NODE_26_length_98072_cov_59.889245,negative,30598-32112,100.0,99.41,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207757,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,DRR207757_AMRSEG0004,NODE_28_length_89719_cov_56.983838,positive,7032-7718,100.0,84.28,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207757,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,DRR207757_AMRSEG0005,NODE_2_length_399468_cov_68.741531,negative,215582-216214,100.0,99.21,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207757,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,DRR207757_AMRSEG0006,NODE_33_length_72784_cov_65.232038,negative,26557-26988,100.0,100.0,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207757,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",DRR207757_AMRSEG0007,NODE_37_length_60771_cov_62.271414,negative,15613-19098,98.94,81.03,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
DRR207757,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,DRR207757_AMRSEG0008,NODE_9_length_208911_cov_55.132024,positive,103501-103845,100.0,99.71,Lab,Lab,Lab:laboratory strain,Japan,2019/10/21,134.0,,
ERR1588778,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR1588778_AMRSEG0001,NODE_14_length_140615_cov_77.935070,negative,131814-132500,100.0,84.13,,,,,,15.0,,
ERR1588778,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR1588778_AMRSEG0002,NODE_17_length_126960_cov_74.962860,positive,22947-23291,100.0,100.0,,,,,,15.0,,
ERR1588778,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR1588778_AMRSEG0003,NODE_1_length_256196_cov_92.447088,negative,202554-204068,100.0,99.87,,,,,,15.0,,
ERR1588778,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR1588778_AMRSEG0004,NODE_28_length_95552_cov_77.477280,positive,71187-72347,100.0,99.91,,,,,,15.0,,
ERR1588778,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR1588778_AMRSEG0005,NODE_29_length_93967_cov_102.034557,positive,89468-90100,100.0,100.0,,,,,,15.0,,
ERR1588778,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR1588778_AMRSEG0006,NODE_35_length_78903_cov_78.773541,negative,72932-74191,100.0,100.0,,,,,,15.0,,
ERR1588778,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR1588778_AMRSEG0007,NODE_36_length_76994_cov_85.670926,negative,15809-19294,98.94,81.06,,,,,,15.0,,
ERR1588778,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR1588778_AMRSEG0008,NODE_55_length_37956_cov_90.189111,negative,9686-10117,100.0,93.52,,,,,,15.0,,
ERR1588779,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR1588779_AMRSEG0001,NODE_11_length_141020_cov_33.294444,negative,131814-132500,100.0,84.13,,,,,,15.0,,
ERR1588779,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR1588779_AMRSEG0002,NODE_16_length_126899_cov_34.600050,negative,103670-104014,100.0,100.0,,,,,,15.0,,
ERR1588779,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR1588779_AMRSEG0003,NODE_18_length_119320_cov_42.210529,positive,114821-115453,100.0,100.0,,,,,,15.0,,
ERR1588779,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR1588779_AMRSEG0004,NODE_2_length_251975_cov_36.896333,positive,52129-53643,100.0,99.87,,,,,,15.0,,
ERR1588779,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR1588779_AMRSEG0005,NODE_30_length_95552_cov_33.219135,negative,23206-24366,100.0,99.91,,,,,,15.0,,
ERR1588779,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR1588779_AMRSEG0006,NODE_36_length_78790_cov_32.437664,positive,4713-5972,100.0,100.0,,,,,,15.0,,
ERR1588779,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR1588779_AMRSEG0007,NODE_37_length_76619_cov_37.422397,positive,57701-61186,98.94,81.06,,,,,,15.0,,
ERR1588779,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR1588779_AMRSEG0008,NODE_54_length_45651_cov_40.636176,positive,25954-26385,100.0,93.52,,,,,,15.0,,
ERR1588781,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR1588781_AMRSEG0001,NODE_15_length_140615_cov_75.044951,negative,131814-132500,100.0,84.13,,,,,,15.0,,
ERR1588781,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR1588781_AMRSEG0002,NODE_18_length_126954_cov_74.959981,negative,103670-104014,100.0,100.0,,,,,,15.0,,
ERR1588781,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR1588781_AMRSEG0003,NODE_19_length_119320_cov_84.248807,negative,3868-4500,100.0,100.0,,,,,,15.0,,
ERR1588781,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR1588781_AMRSEG0004,NODE_1_length_266230_cov_76.269940,positive,52129-53643,100.0,99.87,,,,,,15.0,,
ERR1588781,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR1588781_AMRSEG0005,NODE_29_length_95554_cov_73.440157,negative,23208-24368,100.0,99.91,,,,,,15.0,,
ERR1588781,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR1588781_AMRSEG0006,NODE_30_length_93754_cov_78.598094,negative,9056-9487,100.0,93.52,,,,,,15.0,,
ERR1588781,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR1588781_AMRSEG0007,NODE_34_length_78805_cov_74.824719,negative,72834-74093,100.0,100.0,,,,,,15.0,,
ERR1588781,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR1588781_AMRSEG0008,NODE_36_length_75742_cov_77.502927,positive,57701-61186,98.94,81.06,,,,,,15.0,,
ERR1588782,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR1588782_AMRSEG0001,NODE_16_length_140869_cov_82.842045,positive,8370-9056,100.0,84.13,,,,,,15.0,,
ERR1588782,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR1588782_AMRSEG0002,NODE_1_length_252020_cov_85.800942,negative,198378-199892,100.0,99.87,,,,,,15.0,,
ERR1588782,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR1588782_AMRSEG0003,NODE_20_length_126993_cov_80.123840,negative,103670-104014,100.0,100.0,,,,,,15.0,,
ERR1588782,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR1588782_AMRSEG0004,NODE_28_length_95552_cov_82.523453,positive,71187-72347,100.0,99.91,,,,,,15.0,,
ERR1588782,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR1588782_AMRSEG0005,NODE_29_length_93967_cov_91.567228,negative,3868-4500,100.0,100.0,,,,,,15.0,,
ERR1588782,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR1588782_AMRSEG0006,NODE_34_length_78769_cov_83.121427,negative,72798-74057,100.0,100.0,,,,,,15.0,,
ERR1588782,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR1588782_AMRSEG0007,NODE_35_length_77158_cov_85.233374,positive,57701-61186,98.94,81.06,,,,,,15.0,,
ERR1588782,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR1588782_AMRSEG0008,NODE_54_length_37978_cov_88.643070,negative,9686-10117,100.0,93.52,,,,,,15.0,,
ERR1588783,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR1588783_AMRSEG0001,NODE_13_length_140615_cov_90.933811,negative,131814-132500,100.0,84.13,,,,,,15.0,,
ERR1588783,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR1588783_AMRSEG0002,NODE_17_length_126967_cov_91.997865,negative,103670-104014,100.0,100.0,,,,,,15.0,,
ERR1588783,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR1588783_AMRSEG0003,NODE_19_length_114915_cov_91.606276,positive,52129-53643,100.0,99.87,,,,,,15.0,,
ERR1588783,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR1588783_AMRSEG0004,NODE_27_length_95552_cov_89.915456,negative,23206-24366,100.0,99.91,,,,,,15.0,,
ERR1588783,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR1588783_AMRSEG0005,NODE_28_length_93967_cov_103.061446,negative,3868-4500,100.0,100.0,,,,,,15.0,,
ERR1588783,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR1588783_AMRSEG0006,NODE_34_length_78801_cov_88.948894,negative,72830-74089,100.0,100.0,,,,,,15.0,,
ERR1588783,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR1588783_AMRSEG0007,NODE_36_length_76997_cov_96.715613,negative,15812-19297,98.94,81.06,,,,,,15.0,,
ERR1588783,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR1588783_AMRSEG0008,NODE_59_length_37884_cov_99.022897,positive,27768-28199,100.0,93.52,,,,,,15.0,,
ERR1588784,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR1588784_AMRSEG0001,NODE_17_length_140869_cov_70.734138,negative,131814-132500,100.0,84.13,,,,,,15.0,,
ERR1588784,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR1588784_AMRSEG0002,NODE_1_length_256265_cov_74.772402,positive,52129-53643,100.0,99.87,,,,,,15.0,,
ERR1588784,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR1588784_AMRSEG0003,NODE_28_length_95552_cov_69.676947,positive,71187-72347,100.0,99.91,,,,,,15.0,,
ERR1588784,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR1588784_AMRSEG0004,NODE_29_length_93967_cov_83.165999,positive,89468-90100,100.0,100.0,,,,,,15.0,,
ERR1588784,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR1588784_AMRSEG0005,NODE_34_length_78828_cov_68.805840,negative,72857-74116,100.0,100.0,,,,,,15.0,,
ERR1588784,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR1588784_AMRSEG0006,NODE_35_length_76997_cov_74.392336,positive,57701-61186,98.94,81.06,,,,,,15.0,,
ERR1588784,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR1588784_AMRSEG0007,NODE_4_length_208096_cov_67.141232,positive,104083-104427,100.0,100.0,,,,,,15.0,,
ERR1588784,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR1588784_AMRSEG0008,NODE_53_length_37884_cov_77.007139,positive,27768-28199,100.0,93.52,,,,,,15.0,,
ERR1588785,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR1588785_AMRSEG0001,NODE_13_length_140869_cov_66.188465,negative,131814-132500,100.0,84.13,,,,,,15.0,,
ERR1588785,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR1588785_AMRSEG0002,NODE_1_length_251994_cov_80.673236,negative,198352-199866,100.0,99.87,,,,,,15.0,,
ERR1588785,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR1588785_AMRSEG0003,NODE_26_length_95554_cov_66.052371,positive,71187-72347,100.0,99.91,,,,,,15.0,,
ERR1588785,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR1588785_AMRSEG0004,NODE_27_length_93967_cov_87.382934,negative,3868-4500,100.0,100.0,,,,,,15.0,,
ERR1588785,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR1588785_AMRSEG0005,NODE_32_length_78850_cov_66.217993,negative,72879-74138,100.0,100.0,,,,,,15.0,,
ERR1588785,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR1588785_AMRSEG0006,NODE_35_length_76997_cov_71.662737,negative,15812-19297,98.94,81.06,,,,,,15.0,,
ERR1588785,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR1588785_AMRSEG0007,NODE_3_length_208096_cov_62.217278,positive,104083-104427,100.0,100.0,,,,,,15.0,,
ERR1588785,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR1588785_AMRSEG0008,NODE_56_length_37844_cov_73.906937,positive,27728-28159,100.0,93.52,,,,,,15.0,,
ERR274357,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274357_AMRSEG0001,NODE_15_length_74075_cov_10.131249,negative,9195-9827,100.0,99.05,,,,,,945.0,,
ERR274357,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274357_AMRSEG0002,NODE_193_length_8370_cov_8.766221,negative,6792-7586,100.0,98.99,,,,,,945.0,,
ERR274357,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274357_AMRSEG0003,NODE_235_length_4961_cov_243.911392,positive,3160-3936,100.0,99.74,,,,,,945.0,,
ERR274357,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274357_AMRSEG0004,NODE_25_length_62418_cov_8.990474,positive,32623-33783,100.0,97.85,,,,,,945.0,,
ERR274357,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274357_AMRSEG0005,NODE_2_length_145164_cov_9.368791,negative,67192-70677,98.94,81.01,,,,,,945.0,,
ERR274357,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274357_AMRSEG0006,NODE_38_length_53093_cov_8.858853,negative,8207-8893,100.0,84.28,,,,,,945.0,,
ERR274357,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274357_AMRSEG0007,NODE_47_length_46287_cov_9.762050,positive,29892-30323,100.0,93.06,,,,,,945.0,,
ERR274357,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274357_AMRSEG0008,NODE_65_length_38559_cov_8.892534,negative,5728-6987,100.0,99.6,,,,,,945.0,,
ERR274357,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274357_AMRSEG0009,NODE_83_length_30462_cov_9.745222,negative,2295-3782,98.22,96.77,,,,,,945.0,,
ERR274357,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274357_AMRSEG0010,NODE_95_length_26793_cov_8.132735,negative,10575-10919,100.0,99.71,,,,,,945.0,,
ERR274358,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274358_AMRSEG0001,NODE_179_length_8359_cov_9.083173,negative,6781-7575,100.0,98.99,,,,,,945.0,,
ERR274358,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274358_AMRSEG0002,NODE_1_length_195337_cov_9.757218,positive,124661-128146,98.94,81.01,,,,,,945.0,,
ERR274358,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274358_AMRSEG0003,NODE_210_length_4961_cov_250.892609,positive,3160-3936,100.0,99.74,,,,,,945.0,,
ERR274358,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274358_AMRSEG0004,NODE_21_length_74085_cov_10.487882,negative,9205-9837,100.0,99.05,,,,,,945.0,,
ERR274358,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274358_AMRSEG0005,NODE_27_length_64465_cov_9.354166,negative,8207-8893,100.0,84.28,,,,,,945.0,,
ERR274358,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274358_AMRSEG0006,NODE_28_length_62869_cov_9.517355,negative,30038-31297,100.0,99.6,,,,,,945.0,,
ERR274358,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274358_AMRSEG0007,NODE_29_length_62419_cov_9.315174,positive,32624-33784,100.0,97.85,,,,,,945.0,,
ERR274358,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274358_AMRSEG0008,NODE_41_length_53318_cov_10.032992,positive,36923-37354,100.0,93.06,,,,,,945.0,,
ERR274358,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274358_AMRSEG0009,NODE_84_length_30444_cov_10.152957,negative,2295-3764,97.03,96.3,,,,,,945.0,,
ERR274358,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274358_AMRSEG0010,NODE_92_length_26793_cov_8.523307,negative,10575-10919,100.0,99.71,,,,,,945.0,,
ERR274363,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274363_AMRSEG0001,NODE_119_length_21593_cov_7.470785,negative,8120-8806,100.0,84.28,,,,,,945.0,,
ERR274363,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274363_AMRSEG0002,NODE_11_length_87809_cov_9.013858,negative,9012-9644,100.0,99.05,,,,,,945.0,,
ERR274363,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274363_AMRSEG0003,NODE_174_length_11305_cov_9.154421,positive,4344-5138,100.0,98.99,,,,,,945.0,,
ERR274363,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274363_AMRSEG0004,NODE_1_length_139378_cov_8.106988,negative,135414-138899,98.94,81.01,,,,,,945.0,,
ERR274363,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274363_AMRSEG0005,NODE_205_length_7604_cov_8.603501,negative,2274-3788,100.0,99.27,,,,,,945.0,,
ERR274363,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274363_AMRSEG0006,NODE_40_length_45278_cov_7.656795,positive,12989-14149,100.0,97.85,,,,,,945.0,,
ERR274363,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274363_AMRSEG0007,NODE_62_length_37314_cov_8.707874,negative,7099-7530,100.0,93.06,,,,,,945.0,,
ERR274363,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274363_AMRSEG0008,NODE_67_length_35123_cov_7.915317,negative,2288-3547,100.0,99.6,,,,,,945.0,,
ERR274363,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274363_AMRSEG0009,NODE_92_length_27849_cov_6.749658,positive,17133-17469,97.68,99.7,,,,,,945.0,,
ERR274364,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274364_AMRSEG0001,NODE_11_length_87929_cov_8.387533,positive,78166-78798,100.0,99.05,,,,,,945.0,,
ERR274364,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274364_AMRSEG0002,NODE_126_length_21341_cov_7.880722,positive,20657-21088,100.0,93.29,,,,,,945.0,,
ERR274364,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274364_AMRSEG0003,NODE_156_length_14406_cov_7.608659,negative,9723-10883,100.0,97.85,,,,,,945.0,,
ERR274364,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274364_AMRSEG0004,NODE_220_length_4961_cov_259.438342,negative,2998-3774,100.0,99.74,,,,,,945.0,,
ERR274364,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274364_AMRSEG0005,NODE_29_length_56408_cov_8.536836,positive,49281-50075,100.0,98.99,,,,,,945.0,,
ERR274364,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274364_AMRSEG0006,NODE_3_length_120115_cov_7.641730,negative,111818-115303,98.94,81.01,,,,,,945.0,,
ERR274364,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274364_AMRSEG0007,NODE_56_length_39835_cov_7.330006,negative,7093-8352,100.0,99.6,,,,,,945.0,,
ERR274364,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274364_AMRSEG0008,NODE_78_length_30476_cov_7.510275,positive,26676-28190,100.0,99.21,,,,,,945.0,,
ERR274364,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274364_AMRSEG0009,NODE_86_length_28124_cov_7.269627,positive,17176-17520,100.0,99.71,,,,,,945.0,,
ERR274364,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274364_AMRSEG0010,NODE_90_length_26923_cov_7.026136,negative,8109-8795,100.0,84.28,,,,,,945.0,,
ERR274366,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274366_AMRSEG0001,NODE_106_length_4931_cov_623.356064,negative,3630-4406,100.0,99.74,,,,,,945.0,,
ERR274366,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274366_AMRSEG0002,NODE_12_length_160752_cov_14.556711,positive,95338-96498,100.0,97.85,,,,,,945.0,,
ERR274366,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274366_AMRSEG0003,NODE_15_length_136226_cov_16.135727,negative,47758-49272,100.0,99.34,,,,,,945.0,,
ERR274366,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274366_AMRSEG0004,NODE_1_length_272444_cov_15.690156,negative,144323-147808,98.94,81.01,,,,,,945.0,,
ERR274366,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274366_AMRSEG0005,NODE_20_length_117872_cov_13.082587,negative,104619-104963,100.0,99.71,,,,,,945.0,,
ERR274366,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274366_AMRSEG0006,NODE_28_length_93441_cov_14.394709,negative,48987-49673,100.0,84.28,,,,,,945.0,,
ERR274366,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274366_AMRSEG0007,NODE_42_length_58555_cov_14.700711,negative,30090-31349,100.0,100.0,,,,,,945.0,,
ERR274366,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274366_AMRSEG0008,NODE_51_length_44418_cov_16.145274,positive,36982-37413,100.0,93.06,,,,,,945.0,,
ERR274366,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274366_AMRSEG0009,NODE_6_length_192605_cov_17.204578,positive,78136-78768,100.0,99.05,,,,,,945.0,,
ERR274366,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274366_AMRSEG0010,NODE_7_length_187491_cov_12.235018,negative,47985-48779,100.0,98.99,,,,,,945.0,,
ERR274368,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274368_AMRSEG0001,NODE_106_length_4931_cov_631.848305,positive,514-1290,100.0,99.74,,,,,,945.0,,
ERR274368,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274368_AMRSEG0002,NODE_15_length_136226_cov_16.360936,negative,47758-49272,100.0,99.34,,,,,,945.0,,
ERR274368,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274368_AMRSEG0003,NODE_1_length_272457_cov_15.904539,positive,124631-128116,98.94,81.01,,,,,,945.0,,
ERR274368,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274368_AMRSEG0004,NODE_20_length_117872_cov_13.265226,negative,104619-104963,100.0,99.71,,,,,,945.0,,
ERR274368,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274368_AMRSEG0005,NODE_28_length_93441_cov_14.595345,positive,43769-44455,100.0,84.28,,,,,,945.0,,
ERR274368,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274368_AMRSEG0006,NODE_43_length_58611_cov_14.905323,negative,30128-31387,100.0,100.0,,,,,,945.0,,
ERR274368,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274368_AMRSEG0007,NODE_51_length_44418_cov_16.341872,positive,36982-37413,100.0,93.06,,,,,,945.0,,
ERR274368,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274368_AMRSEG0008,NODE_5_length_218567_cov_17.389711,negative,139800-140432,100.0,99.05,,,,,,945.0,,
ERR274368,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274368_AMRSEG0009,NODE_6_length_215593_cov_14.735271,negative,119042-120202,100.0,97.85,,,,,,945.0,,
ERR274368,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274368_AMRSEG0010,NODE_7_length_187529_cov_12.416238,positive,138751-139545,100.0,98.99,,,,,,945.0,,
ERR274369,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274369_AMRSEG0001,NODE_15_length_149751_cov_16.510754,positive,86955-88469,100.0,99.34,,,,,,945.0,,
ERR274369,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274369_AMRSEG0002,NODE_16_length_148519_cov_17.175949,positive,682-4167,98.94,81.01,,,,,,945.0,,
ERR274369,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274369_AMRSEG0003,NODE_20_length_122002_cov_15.855611,positive,119631-120425,100.0,98.99,,,,,,945.0,,
ERR274369,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274369_AMRSEG0004,NODE_22_length_117872_cov_16.518428,negative,104619-104963,100.0,99.71,,,,,,945.0,,
ERR274369,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274369_AMRSEG0005,NODE_2_length_316184_cov_16.406609,positive,43769-44455,100.0,84.28,,,,,,945.0,,
ERR274369,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274369_AMRSEG0006,NODE_48_length_44428_cov_17.761189,negative,7006-7437,100.0,93.06,,,,,,945.0,,
ERR274369,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274369_AMRSEG0007,NODE_6_length_218465_cov_17.630452,negative,139698-140330,100.0,99.05,,,,,,945.0,,
ERR274369,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274369_AMRSEG0008,NODE_7_length_201057_cov_16.929551,positive,31598-32857,100.0,99.6,,,,,,945.0,,
ERR274369,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274369_AMRSEG0009,NODE_89_length_4931_cov_466.331972,positive,521-1297,100.0,99.74,,,,,,945.0,,
ERR274369,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274369_AMRSEG0010,NODE_9_length_176489_cov_16.457179,positive,95344-96504,100.0,97.85,,,,,,945.0,,
ERR274371,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274371_AMRSEG0001,NODE_12_length_164068_cov_10.755863,positive,27612-28406,100.0,98.99,,,,,,945.0,,
ERR274371,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274371_AMRSEG0002,NODE_14_length_160759_cov_9.802210,negative,64262-65422,100.0,97.85,,,,,,945.0,,
ERR274371,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274371_AMRSEG0003,NODE_18_length_149758_cov_10.664218,positive,86955-88469,100.0,99.34,,,,,,945.0,,
ERR274371,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274371_AMRSEG0004,NODE_1_length_279746_cov_9.543293,negative,235067-235753,100.0,84.28,,,,,,945.0,,
ERR274371,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274371_AMRSEG0005,NODE_2_length_272462_cov_10.148336,positive,124631-128116,98.94,81.01,,,,,,945.0,,
ERR274371,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274371_AMRSEG0006,NODE_36_length_62926_cov_9.935939,positive,31598-32857,100.0,99.6,,,,,,945.0,,
ERR274371,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274371_AMRSEG0007,NODE_52_length_44783_cov_10.473922,negative,7384-7815,100.0,93.06,,,,,,945.0,,
ERR274371,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274371_AMRSEG0008,NODE_5_length_219587_cov_10.963034,positive,78136-78768,100.0,99.05,,,,,,945.0,,
ERR274371,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274371_AMRSEG0009,NODE_6_length_209042_cov_8.968341,positive,104079-104423,100.0,99.71,,,,,,945.0,,
ERR274371,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274371_AMRSEG0010,NODE_97_length_4931_cov_356.621682,negative,3712-4488,100.0,99.74,,,,,,945.0,,
ERR274425,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274425_AMRSEG0001,NODE_14_length_149751_cov_16.749983,negative,61283-62797,100.0,99.34,,,,,,945.0,,
ERR274425,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274425_AMRSEG0002,NODE_15_length_148536_cov_17.413103,positive,699-4184,98.94,81.01,,,,,,945.0,,
ERR274425,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274425_AMRSEG0003,NODE_18_length_122046_cov_16.068189,positive,119675-120469,100.0,98.99,,,,,,945.0,,
ERR274425,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274425_AMRSEG0004,NODE_20_length_117872_cov_16.742708,positive,12910-13254,100.0,99.71,,,,,,945.0,,
ERR274425,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274425_AMRSEG0005,NODE_2_length_316184_cov_16.644094,negative,271730-272416,100.0,84.28,,,,,,945.0,,
ERR274425,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274425_AMRSEG0006,NODE_49_length_44428_cov_18.007749,negative,7006-7437,100.0,93.06,,,,,,945.0,,
ERR274425,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274425_AMRSEG0007,NODE_6_length_218465_cov_17.873823,positive,78136-78768,100.0,99.05,,,,,,945.0,,
ERR274425,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274425_AMRSEG0008,NODE_7_length_201106_cov_17.156162,positive,31598-32857,100.0,99.6,,,,,,945.0,,
ERR274425,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274425_AMRSEG0009,NODE_90_length_4931_cov_472.556350,negative,3642-4418,100.0,99.74,,,,,,945.0,,
ERR274425,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274425_AMRSEG0010,NODE_9_length_176494_cov_16.697367,positive,95344-96504,100.0,97.85,,,,,,945.0,,
ERR274427,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274427_AMRSEG0001,NODE_103_length_4931_cov_362.308493,positive,509-1285,100.0,99.74,,,,,,945.0,,
ERR274427,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274427_AMRSEG0002,NODE_11_length_164068_cov_10.949675,negative,135663-136457,100.0,98.99,,,,,,945.0,,
ERR274427,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274427_AMRSEG0003,NODE_13_length_160818_cov_9.960469,negative,64275-65435,100.0,97.85,,,,,,945.0,,
ERR274427,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274427_AMRSEG0004,NODE_16_length_149758_cov_10.853745,positive,86955-88469,100.0,99.34,,,,,,945.0,,
ERR274427,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274427_AMRSEG0005,NODE_1_length_279521_cov_9.703783,positive,43769-44455,100.0,84.28,,,,,,945.0,,
ERR274427,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274427_AMRSEG0006,NODE_2_length_272429_cov_10.316829,positive,124631-128116,98.94,81.01,,,,,,945.0,,
ERR274427,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274427_AMRSEG0007,NODE_37_length_62926_cov_10.100552,positive,31598-32857,100.0,99.6,,,,,,945.0,,
ERR274427,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274427_AMRSEG0008,NODE_4_length_219587_cov_11.149221,negative,140820-141452,100.0,99.05,,,,,,945.0,,
ERR274427,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274427_AMRSEG0009,NODE_54_length_44937_cov_10.626715,positive,36946-37377,100.0,93.06,,,,,,945.0,,
ERR274427,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274427_AMRSEG0010,NODE_5_length_209073_cov_9.122039,positive,104111-104455,100.0,99.71,,,,,,945.0,,
ERR274472,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274472_AMRSEG0001,NODE_109_length_21603_cov_11.138812,positive,12820-13506,100.0,84.28,,,,,,945.0,,
ERR274472,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274472_AMRSEG0002,NODE_110_length_21228_cov_8.787952,negative,3778-4094,91.88,99.05,,,,,,945.0,,
ERR274472,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274472_AMRSEG0003,NODE_14_length_87933_cov_13.103118,positive,78166-78798,100.0,99.05,,,,,,945.0,,
ERR274472,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274472_AMRSEG0004,NODE_195_length_7501_cov_10.071121,positive,3728-5243,100.0,99.21,,,,,,945.0,,
ERR274472,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274472_AMRSEG0005,NODE_19_length_77584_cov_12.138801,negative,20986-21780,100.0,98.99,,,,,,945.0,,
ERR274472,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274472_AMRSEG0006,NODE_221_length_4961_cov_393.908534,negative,1227-2003,100.0,99.74,,,,,,945.0,,
ERR274472,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274472_AMRSEG0007,NODE_23_length_71130_cov_10.997664,positive,457-3942,98.94,81.01,,,,,,945.0,,
ERR274472,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274472_AMRSEG0008,NODE_30_length_62790_cov_10.734277,positive,31556-32815,100.0,100.0,,,,,,945.0,,
ERR274472,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274472_AMRSEG0009,NODE_62_length_37606_cov_12.571984,negative,7414-7845,100.0,93.06,,,,,,945.0,,
ERR274472,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274472_AMRSEG0010,NODE_71_length_33401_cov_10.078139,positive,3608-4768,100.0,97.76,,,,,,945.0,,
ERR274475,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274475_AMRSEG0001,NODE_111_length_21697_cov_11.403485,positive,12820-13506,100.0,84.28,,,,,,945.0,,
ERR274475,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274475_AMRSEG0002,NODE_113_length_21267_cov_9.189257,negative,3796-4127,96.23,99.7,,,,,,945.0,,
ERR274475,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274475_AMRSEG0003,NODE_13_length_87933_cov_13.464641,positive,78166-78798,100.0,99.05,,,,,,945.0,,
ERR274475,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274475_AMRSEG0004,NODE_190_length_7500_cov_10.526691,negative,2259-3773,100.0,99.27,,,,,,945.0,,
ERR274475,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274475_AMRSEG0005,NODE_19_length_77752_cov_12.505284,positive,55805-56599,100.0,98.99,,,,,,945.0,,
ERR274475,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274475_AMRSEG0006,NODE_211_length_4961_cov_404.195998,negative,1227-2003,100.0,99.74,,,,,,945.0,,
ERR274475,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274475_AMRSEG0007,NODE_24_length_71113_cov_11.398973,positive,457-3942,98.94,81.01,,,,,,945.0,,
ERR274475,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274475_AMRSEG0008,NODE_31_length_62790_cov_11.090774,positive,31556-32815,100.0,100.0,,,,,,945.0,,
ERR274475,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274475_AMRSEG0009,NODE_66_length_37606_cov_12.917401,negative,7414-7845,100.0,93.06,,,,,,945.0,,
ERR274475,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274475_AMRSEG0010,NODE_78_length_33401_cov_10.394655,positive,3608-4768,100.0,97.85,,,,,,945.0,,
ERR274492,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274492_AMRSEG0001,NODE_100_length_4931_cov_305.951000,negative,3167-3943,100.0,99.74,,,,,,945.0,,
ERR274492,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274492_AMRSEG0002,NODE_11_length_160783_cov_11.438134,positive,95363-96523,100.0,97.85,,,,,,945.0,,
ERR274492,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274492_AMRSEG0003,NODE_20_length_114978_cov_10.224586,positive,104053-104397,100.0,99.71,,,,,,945.0,,
ERR274492,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274492_AMRSEG0004,NODE_24_length_100719_cov_11.656179,negative,72233-73492,100.0,100.0,,,,,,945.0,,
ERR274492,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274492_AMRSEG0005,NODE_28_length_90763_cov_12.282244,positive,86964-88478,100.0,99.34,,,,,,945.0,,
ERR274492,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274492_AMRSEG0006,NODE_45_length_52687_cov_11.034090,positive,43769-44455,100.0,84.28,,,,,,945.0,,
ERR274492,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274492_AMRSEG0007,NODE_53_length_45460_cov_12.564796,negative,6790-7584,100.0,98.99,,,,,,945.0,,
ERR274492,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274492_AMRSEG0008,NODE_56_length_44926_cov_12.178558,positive,36935-37366,100.0,93.06,,,,,,945.0,,
ERR274492,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274492_AMRSEG0009,NODE_6_length_222506_cov_11.869706,negative,144342-147827,98.94,81.01,,,,,,945.0,,
ERR274492,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274492_AMRSEG0010,NODE_7_length_206619_cov_12.854676,positive,78136-78768,100.0,99.05,,,,,,945.0,,
ERR274493,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274493_AMRSEG0001,NODE_111_length_4931_cov_360.564720,negative,3635-4411,100.0,99.74,,,,,,945.0,,
ERR274493,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274493_AMRSEG0002,NODE_11_length_151945_cov_14.783217,negative,10603-10947,100.0,99.71,,,,,,945.0,,
ERR274493,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274493_AMRSEG0003,NODE_1_length_316184_cov_15.085209,negative,271730-272416,100.0,84.28,,,,,,945.0,,
ERR274493,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274493_AMRSEG0004,NODE_24_length_90718_cov_15.065292,negative,2232-3746,100.0,99.34,,,,,,945.0,,
ERR274493,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274493_AMRSEG0005,NODE_33_length_73875_cov_14.861596,positive,8454-9614,100.0,97.85,,,,,,945.0,,
ERR274493,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274493_AMRSEG0006,NODE_4_length_272463_cov_16.184932,positive,124631-128116,98.94,81.01,,,,,,945.0,,
ERR274493,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274493_AMRSEG0007,NODE_52_length_45435_cov_15.477710,positive,37868-38662,100.0,98.99,,,,,,945.0,,
ERR274493,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274493_AMRSEG0008,NODE_54_length_44305_cov_16.503207,positive,36869-37300,100.0,93.06,,,,,,945.0,,
ERR274493,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274493_AMRSEG0009,NODE_5_length_238275_cov_15.498661,negative,205424-206683,100.0,99.6,,,,,,945.0,,
ERR274493,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274493_AMRSEG0010,NODE_6_length_218487_cov_16.541029,positive,78136-78768,100.0,99.05,,,,,,945.0,,
ERR274494,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274494_AMRSEG0001,NODE_106_length_7584_cov_12.442590,negative,2288-3802,100.0,99.34,,,,,,945.0,,
ERR274494,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274494_AMRSEG0002,NODE_114_length_4958_cov_366.742335,positive,3982-4758,100.0,99.74,,,,,,945.0,,
ERR274494,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274494_AMRSEG0003,NODE_11_length_143651_cov_11.881317,negative,15536-19021,98.94,81.01,,,,,,945.0,,
ERR274494,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274494_AMRSEG0004,NODE_17_length_124892_cov_10.491346,positive,116901-117332,100.0,93.06,,,,,,945.0,,
ERR274494,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274494_AMRSEG0005,NODE_32_length_78533_cov_11.339605,negative,64261-65421,100.0,97.85,,,,,,945.0,,
ERR274494,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274494_AMRSEG0006,NODE_33_length_77277_cov_12.601276,positive,6221-7015,100.0,98.99,,,,,,945.0,,
ERR274494,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274494_AMRSEG0007,NODE_41_length_62886_cov_11.602390,positive,31591-32850,100.0,99.6,,,,,,945.0,,
ERR274494,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274494_AMRSEG0008,NODE_49_length_52664_cov_10.873212,positive,43769-44455,100.0,84.28,,,,,,945.0,,
ERR274494,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274494_AMRSEG0009,NODE_5_length_209015_cov_9.502627,positive,104053-104397,100.0,99.71,,,,,,945.0,,
ERR274494,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274494_AMRSEG0010,NODE_6_length_176585_cov_14.001427,positive,78136-78768,100.0,99.05,,,,,,945.0,,
ERR274495,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274495_AMRSEG0001,NODE_11_length_218465_cov_12.955872,negative,139698-140330,100.0,99.05,,,,,,15.0,,
ERR274495,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274495_AMRSEG0002,NODE_12_length_215508_cov_12.268166,negative,119005-120165,100.0,97.85,,,,,,15.0,,
ERR274495,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274495_AMRSEG0003,NODE_13_length_209015_cov_11.044501,negative,104619-104963,100.0,99.71,,,,,,15.0,,
ERR274495,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274495_AMRSEG0004,NODE_19_length_149748_cov_12.991417,negative,61280-62794,100.0,99.34,,,,,,15.0,,
ERR274495,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274495_AMRSEG0005,NODE_3_length_316184_cov_11.872820,negative,271730-272416,100.0,84.28,,,,,,15.0,,
ERR274495,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274495_AMRSEG0006,NODE_43_length_44974_cov_12.042389,negative,7561-7992,100.0,93.06,,,,,,15.0,,
ERR274495,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274495_AMRSEG0007,NODE_4_length_274750_cov_12.155338,positive,120434-121228,100.0,98.99,,,,,,15.0,,
ERR274495,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274495_AMRSEG0008,NODE_4_length_274750_cov_12.155338,negative,146635-150120,98.94,81.01,,,,,,15.0,,
ERR274495,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274495_AMRSEG0009,NODE_5_length_265902_cov_12.281755,positive,31608-32867,100.0,99.6,,,,,,15.0,,
ERR274495,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274495_AMRSEG0010,NODE_70_length_4932_cov_324.487242,positive,2895-3671,100.0,99.74,,,,,,15.0,,
ERR274496,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274496_AMRSEG0001,NODE_110_length_4931_cov_491.352185,positive,494-1270,100.0,99.74,,,,,,947.0,,
ERR274496,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274496_AMRSEG0002,NODE_14_length_160761_cov_13.287741,negative,64264-65424,100.0,97.85,,,,,,947.0,,
ERR274496,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274496_AMRSEG0003,NODE_1_length_272425_cov_14.174895,positive,124631-128116,98.94,81.01,,,,,,947.0,,
ERR274496,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274496_AMRSEG0004,NODE_22_length_104475_cov_12.360621,positive,104071-104415,100.0,99.71,,,,,,947.0,,
ERR274496,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274496_AMRSEG0005,NODE_27_length_90763_cov_13.879786,negative,2286-3800,100.0,99.34,,,,,,947.0,,
ERR274496,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274496_AMRSEG0006,NODE_3_length_238284_cov_13.838418,positive,31602-32861,100.0,99.6,,,,,,947.0,,
ERR274496,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274496_AMRSEG0007,NODE_44_length_52654_cov_13.652287,negative,8200-8886,100.0,84.28,,,,,,947.0,,
ERR274496,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274496_AMRSEG0008,NODE_54_length_44359_cov_14.617313,negative,7006-7437,100.0,93.06,,,,,,947.0,,
ERR274496,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274496_AMRSEG0009,NODE_6_length_206607_cov_15.312861,negative,127840-128472,100.0,99.05,,,,,,947.0,,
ERR274496,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274496_AMRSEG0010,NODE_8_length_180643_cov_13.105116,positive,139818-140612,100.0,98.99,,,,,,947.0,,
ERR274498,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274498_AMRSEG0001,NODE_11_length_160754_cov_9.035938,positive,95344-96504,100.0,97.85,,,,,,946.0,,
ERR274498,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274498_AMRSEG0002,NODE_15_length_149745_cov_10.423366,positive,86952-88466,100.0,99.34,,,,,,946.0,,
ERR274498,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274498_AMRSEG0003,NODE_1_length_269961_cov_9.508891,negative,144434-147919,98.94,81.06,,,,,,946.0,,
ERR274498,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274498_AMRSEG0004,NODE_22_length_114998_cov_7.270239,negative,10602-10946,100.0,99.71,,,,,,946.0,,
ERR274498,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274498_AMRSEG0005,NODE_25_length_111609_cov_9.919140,negative,88516-89310,100.0,98.99,,,,,,946.0,,
ERR274498,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274498_AMRSEG0006,NODE_33_length_74810_cov_8.924696,negative,30131-30817,100.0,84.28,,,,,,946.0,,
ERR274498,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274498_AMRSEG0007,NODE_40_length_62951_cov_9.361423,negative,30099-31358,100.0,99.6,,,,,,946.0,,
ERR274498,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274498_AMRSEG0008,NODE_59_length_35136_cov_9.690454,negative,6971-7402,100.0,93.06,,,,,,946.0,,
ERR274498,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274498_AMRSEG0009,NODE_5_length_218823_cov_11.266310,positive,78136-78768,100.0,99.05,,,,,,946.0,,
ERR274498,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274498_AMRSEG0010,NODE_94_length_4931_cov_133.415680,positive,436-1212,100.0,99.74,,,,,,946.0,,
ERR274499,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274499_AMRSEG0001,NODE_117_length_7556_cov_9.059817,positive,3763-5277,100.0,99.34,,,,,,945.0,,
ERR274499,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274499_AMRSEG0002,NODE_126_length_4931_cov_424.474479,negative,3660-4436,100.0,99.74,,,,,,945.0,,
ERR274499,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274499_AMRSEG0003,NODE_13_length_114992_cov_7.787542,positive,104059-104403,100.0,99.71,,,,,,945.0,,
ERR274499,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274499_AMRSEG0004,NODE_1_length_263768_cov_8.610662,negative,135653-139138,98.94,81.01,,,,,,945.0,,
ERR274499,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274499_AMRSEG0005,NODE_24_length_94239_cov_9.012834,positive,13117-14277,100.0,97.85,,,,,,945.0,,
ERR274499,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274499_AMRSEG0006,NODE_39_length_62906_cov_8.752628,negative,30084-31343,100.0,99.6,,,,,,945.0,,
ERR274499,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274499_AMRSEG0007,NODE_47_length_52641_cov_8.339644,negative,8187-8873,100.0,84.28,,,,,,945.0,,
ERR274499,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274499_AMRSEG0008,NODE_4_length_176220_cov_9.069931,positive,78136-78768,100.0,99.05,,,,,,945.0,,
ERR274499,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274499_AMRSEG0009,NODE_55_length_44364_cov_8.537705,negative,7000-7431,100.0,93.06,,,,,,945.0,,
ERR274499,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274499_AMRSEG0010,NODE_9_length_161456_cov_9.395099,positive,27661-28455,100.0,98.99,,,,,,945.0,,
ERR274500,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274500_AMRSEG0001,NODE_100_length_4931_cov_632.097387,positive,521-1297,100.0,99.74,,,,,,945.0,,
ERR274500,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274500_AMRSEG0002,NODE_15_length_138834_cov_17.500313,positive,76042-77556,100.0,99.34,,,,,,945.0,,
ERR274500,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274500_AMRSEG0003,NODE_29_length_74547_cov_17.484835,positive,43769-44455,100.0,84.28,,,,,,945.0,,
ERR274500,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274500_AMRSEG0004,NODE_2_length_296326_cov_19.086171,negative,196165-196959,100.0,98.99,,,,,,945.0,,
ERR274500,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274500_AMRSEG0005,NODE_36_length_62916_cov_17.851534,positive,31605-32864,100.0,99.6,,,,,,945.0,,
ERR274500,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274500_AMRSEG0006,NODE_3_length_272432_cov_18.555644,negative,144317-147802,98.94,81.01,,,,,,945.0,,
ERR274500,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274500_AMRSEG0007,NODE_49_length_44940_cov_18.908589,negative,7561-7992,100.0,93.06,,,,,,945.0,,
ERR274500,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274500_AMRSEG0008,NODE_6_length_219829_cov_19.956064,negative,141062-141694,100.0,99.05,,,,,,945.0,,
ERR274500,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274500_AMRSEG0009,NODE_7_length_215565_cov_17.354402,negative,119062-120222,100.0,97.85,,,,,,945.0,,
ERR274500,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274500_AMRSEG0010,NODE_8_length_209035_cov_16.682764,negative,104625-104969,100.0,99.71,,,,,,945.0,,
ERR274501,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274501_AMRSEG0001,NODE_109_length_4931_cov_498.301143,negative,1227-2003,100.0,99.74,,,,,,945.0,,
ERR274501,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274501_AMRSEG0002,NODE_11_length_160761_cov_12.495968,positive,95338-96498,100.0,97.85,,,,,,945.0,,
ERR274501,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274501_AMRSEG0003,NODE_16_length_115016_cov_11.024899,negative,10592-10936,100.0,99.71,,,,,,945.0,,
ERR274501,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274501_AMRSEG0004,NODE_1_length_296661_cov_14.160450,positive,99720-100514,100.0,98.99,,,,,,945.0,,
ERR274501,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274501_AMRSEG0005,NODE_2_length_272464_cov_12.444153,positive,124631-128116,98.94,81.01,,,,,,945.0,,
ERR274501,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274501_AMRSEG0006,NODE_31_length_75024_cov_11.934846,negative,30090-30776,100.0,84.28,,,,,,945.0,,
ERR274501,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274501_AMRSEG0007,NODE_37_length_62889_cov_12.688653,negative,30042-31301,100.0,99.6,,,,,,945.0,,
ERR274501,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274501_AMRSEG0008,NODE_54_length_42830_cov_13.689137,positive,39029-40543,100.0,99.87,,,,,,945.0,,
ERR274501,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274501_AMRSEG0009,NODE_57_length_37626_cov_12.565797,negative,7561-7992,100.0,93.06,,,,,,945.0,,
ERR274501,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274501_AMRSEG0010,NODE_7_length_200846_cov_13.554740,negative,122079-122711,100.0,99.05,,,,,,945.0,,
ERR274516,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274516_AMRSEG0001,NODE_100_length_4931_cov_310.366476,negative,3628-4404,100.0,99.74,,,,,,945.0,,
ERR274516,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274516_AMRSEG0002,NODE_20_length_114978_cov_10.426152,negative,10582-10926,100.0,99.71,,,,,,945.0,,
ERR274516,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274516_AMRSEG0003,NODE_24_length_100719_cov_11.846155,negative,72233-73492,100.0,100.0,,,,,,945.0,,
ERR274516,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274516_AMRSEG0004,NODE_27_length_90763_cov_12.516742,negative,2286-3800,100.0,99.34,,,,,,945.0,,
ERR274516,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274516_AMRSEG0005,NODE_2_length_272457_cov_12.094485,positive,124631-128116,98.94,81.01,,,,,,945.0,,
ERR274516,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274516_AMRSEG0006,NODE_34_length_74534_cov_11.188991,negative,30080-30766,100.0,84.28,,,,,,945.0,,
ERR274516,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274516_AMRSEG0007,NODE_51_length_45478_cov_12.781164,negative,6790-7584,100.0,98.99,,,,,,945.0,,
ERR274516,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274516_AMRSEG0008,NODE_54_length_44926_cov_12.340409,negative,7561-7992,100.0,93.06,,,,,,945.0,,
ERR274516,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274516_AMRSEG0009,NODE_7_length_215539_cov_11.714727,negative,119036-120196,100.0,97.85,,,,,,945.0,,
ERR274516,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274516_AMRSEG0010,NODE_8_length_206619_cov_13.068683,negative,127852-128484,100.0,99.05,,,,,,945.0,,
ERR274517,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274517_AMRSEG0001,NODE_111_length_4931_cov_365.192119,negative,3635-4411,100.0,99.74,,,,,,945.0,,
ERR274517,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274517_AMRSEG0002,NODE_14_length_128663_cov_15.044842,positive,8454-9614,100.0,97.85,,,,,,945.0,,
ERR274517,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274517_AMRSEG0003,NODE_17_length_115037_cov_14.472418,negative,10603-10947,100.0,99.71,,,,,,945.0,,
ERR274517,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274517_AMRSEG0004,NODE_1_length_316184_cov_15.302732,negative,271730-272416,100.0,84.28,,,,,,945.0,,
ERR274517,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274517_AMRSEG0005,NODE_20_length_105047_cov_15.482221,negative,72196-73455,100.0,99.6,,,,,,945.0,,
ERR274517,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274517_AMRSEG0006,NODE_27_length_90718_cov_15.301097,positive,86973-88487,100.0,99.34,,,,,,945.0,,
ERR274517,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274517_AMRSEG0007,NODE_4_length_272564_cov_16.397958,positive,124631-128116,98.94,81.01,,,,,,945.0,,
ERR274517,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274517_AMRSEG0008,NODE_51_length_45414_cov_15.720698,positive,37847-38641,100.0,98.99,,,,,,945.0,,
ERR274517,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274517_AMRSEG0009,NODE_53_length_44305_cov_16.718987,negative,7006-7437,100.0,93.06,,,,,,945.0,,
ERR274517,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274517_AMRSEG0010,NODE_5_length_218465_cov_16.775852,positive,78136-78768,100.0,99.05,,,,,,945.0,,
ERR274518,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274518_AMRSEG0001,NODE_108_length_7584_cov_12.667064,negative,2288-3802,100.0,99.34,,,,,,945.0,,
ERR274518,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274518_AMRSEG0002,NODE_116_length_4958_cov_372.891777,positive,521-1297,100.0,99.74,,,,,,945.0,,
ERR274518,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274518_AMRSEG0003,NODE_16_length_124892_cov_10.694119,positive,116901-117332,100.0,93.06,,,,,,945.0,,
ERR274518,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274518_AMRSEG0004,NODE_29_length_88097_cov_14.097804,negative,9330-9962,100.0,99.05,,,,,,945.0,,
ERR274518,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274518_AMRSEG0005,NODE_34_length_78608_cov_11.532599,negative,64336-65496,100.0,97.85,,,,,,945.0,,
ERR274518,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274518_AMRSEG0006,NODE_35_length_77347_cov_12.813889,positive,6221-7015,100.0,98.99,,,,,,945.0,,
ERR274518,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274518_AMRSEG0007,NODE_43_length_62886_cov_11.806358,positive,31591-32850,100.0,99.6,,,,,,945.0,,
ERR274518,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274518_AMRSEG0008,NODE_4_length_209015_cov_9.676302,negative,104619-104963,100.0,99.71,,,,,,945.0,,
ERR274518,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274518_AMRSEG0009,NODE_51_length_52682_cov_11.025186,negative,8228-8914,100.0,84.28,,,,,,945.0,,
ERR274518,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274518_AMRSEG0010,NODE_9_length_143651_cov_12.073027,positive,124631-128116,98.94,81.01,,,,,,945.0,,
ERR274519,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274519_AMRSEG0001,NODE_10_length_218465_cov_13.170470,negative,139698-140330,100.0,99.05,,,,,,15.0,,
ERR274519,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274519_AMRSEG0002,NODE_11_length_215508_cov_12.477721,negative,119005-120165,100.0,97.85,,,,,,15.0,,
ERR274519,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274519_AMRSEG0003,NODE_12_length_209015_cov_11.252079,negative,104619-104963,100.0,99.71,,,,,,15.0,,
ERR274519,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274519_AMRSEG0004,NODE_17_length_149748_cov_13.229282,negative,61280-62794,100.0,99.34,,,,,,15.0,,
ERR274519,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274519_AMRSEG0005,NODE_21_length_124900_cov_12.504761,positive,31608-32867,100.0,99.6,,,,,,15.0,,
ERR274519,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274519_AMRSEG0006,NODE_3_length_316184_cov_12.078314,negative,271730-272416,100.0,84.28,,,,,,15.0,,
ERR274519,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274519_AMRSEG0007,NODE_45_length_44974_cov_12.240560,negative,7561-7992,100.0,93.06,,,,,,15.0,,
ERR274519,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274519_AMRSEG0008,NODE_4_length_274728_cov_12.362351,positive,124631-128116,98.94,81.01,,,,,,15.0,,
ERR274519,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274519_AMRSEG0009,NODE_4_length_274728_cov_12.362351,negative,153523-154317,100.0,98.99,,,,,,15.0,,
ERR274519,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274519_AMRSEG0010,NODE_70_length_4932_cov_329.202694,negative,985-1761,100.0,99.74,,,,,,15.0,,
ERR274520,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274520_AMRSEG0001,NODE_109_length_4931_cov_498.268273,positive,494-1270,100.0,99.74,,,,,,947.0,,
ERR274520,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274520_AMRSEG0002,NODE_14_length_160761_cov_13.466471,positive,95338-96498,100.0,97.85,,,,,,947.0,,
ERR274520,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274520_AMRSEG0003,NODE_1_length_279000_cov_13.405184,positive,139782-140576,100.0,98.99,,,,,,947.0,,
ERR274520,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274520_AMRSEG0004,NODE_22_length_104507_cov_12.549687,positive,104103-104447,100.0,99.71,,,,,,947.0,,
ERR274520,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274520_AMRSEG0005,NODE_26_length_90761_cov_14.091096,negative,2293-3807,100.0,99.34,,,,,,947.0,,
ERR274520,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274520_AMRSEG0006,NODE_2_length_272425_cov_14.359809,positive,124631-128116,98.94,81.01,,,,,,947.0,,
ERR274520,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274520_AMRSEG0007,NODE_34_length_74542_cov_13.511012,positive,43770-44456,100.0,84.28,,,,,,947.0,,
ERR274520,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274520_AMRSEG0008,NODE_4_length_238284_cov_14.031777,positive,31602-32861,100.0,99.6,,,,,,947.0,,
ERR274520,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274520_AMRSEG0009,NODE_53_length_44359_cov_14.789898,positive,36923-37354,100.0,93.06,,,,,,947.0,,
ERR274520,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274520_AMRSEG0010,NODE_7_length_206607_cov_15.518734,positive,78136-78768,100.0,99.05,,,,,,947.0,,
ERR274522,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274522_AMRSEG0001,NODE_10_length_192420_cov_10.052587,negative,7358-7789,100.0,93.06,,,,,,946.0,,
ERR274522,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274522_AMRSEG0002,NODE_16_length_149745_cov_10.628520,positive,86952-88466,100.0,99.34,,,,,,946.0,,
ERR274522,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274522_AMRSEG0003,NODE_1_length_269975_cov_9.664821,negative,144448-147933,98.94,81.06,,,,,,946.0,,
ERR274522,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274522_AMRSEG0004,NODE_22_length_114998_cov_7.409568,negative,10602-10946,100.0,99.71,,,,,,946.0,,
ERR274522,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274522_AMRSEG0005,NODE_25_length_111609_cov_10.086614,negative,88516-89310,100.0,98.99,,,,,,946.0,,
ERR274522,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274522_AMRSEG0006,NODE_32_length_74818_cov_9.073517,negative,30139-30825,100.0,84.28,,,,,,946.0,,
ERR274522,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274522_AMRSEG0007,NODE_39_length_62951_cov_9.520074,positive,31594-32853,100.0,99.6,,,,,,946.0,,
ERR274522,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274522_AMRSEG0008,NODE_6_length_218888_cov_11.447109,negative,140121-140753,100.0,99.05,,,,,,946.0,,
ERR274522,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274522_AMRSEG0009,NODE_7_length_215028_cov_9.323087,positive,95344-96504,100.0,97.85,,,,,,946.0,,
ERR274522,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274522_AMRSEG0010,NODE_91_length_4931_cov_135.377705,negative,3635-4411,100.0,99.74,,,,,,946.0,,
ERR274523,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274523_AMRSEG0001,NODE_114_length_7556_cov_9.291772,positive,3763-5277,100.0,99.34,,,,,,945.0,,
ERR274523,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274523_AMRSEG0002,NODE_122_length_4931_cov_431.091466,negative,3635-4411,100.0,99.74,,,,,,945.0,,
ERR274523,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274523_AMRSEG0003,NODE_14_length_115048_cov_7.940503,positive,104109-104453,100.0,99.71,,,,,,945.0,,
ERR274523,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274523_AMRSEG0004,NODE_25_length_94276_cov_9.164002,positive,13117-14277,100.0,97.85,,,,,,945.0,,
ERR274523,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274523_AMRSEG0005,NODE_2_length_263768_cov_8.748460,negative,135653-139138,98.94,81.01,,,,,,945.0,,
ERR274523,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274523_AMRSEG0006,NODE_39_length_62906_cov_8.908450,positive,31564-32823,100.0,99.6,,,,,,945.0,,
ERR274523,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274523_AMRSEG0007,NODE_46_length_52670_cov_8.481619,positive,43769-44455,100.0,84.28,,,,,,945.0,,
ERR274523,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274523_AMRSEG0008,NODE_56_length_44364_cov_8.671426,positive,36934-37365,100.0,93.06,,,,,,945.0,,
ERR274523,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274523_AMRSEG0009,NODE_5_length_176220_cov_9.217899,positive,78136-78768,100.0,99.05,,,,,,945.0,,
ERR274523,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274523_AMRSEG0010,NODE_9_length_161456_cov_9.578994,positive,27661-28455,100.0,98.99,,,,,,945.0,,
ERR274524,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274524_AMRSEG0001,NODE_103_length_4931_cov_640.350347,negative,3662-4438,100.0,99.74,,,,,,945.0,,
ERR274524,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274524_AMRSEG0002,NODE_12_length_160755_cov_17.426171,negative,64258-65418,100.0,97.85,,,,,,945.0,,
ERR274524,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274524_AMRSEG0003,NODE_14_length_138834_cov_17.770938,positive,76042-77556,100.0,99.34,,,,,,945.0,,
ERR274524,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274524_AMRSEG0004,NODE_24_length_88095_cov_21.152234,negative,9328-9960,100.0,99.05,,,,,,945.0,,
ERR274524,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274524_AMRSEG0005,NODE_2_length_327554_cov_19.328874,negative,196127-196921,100.0,98.99,,,,,,945.0,,
ERR274524,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274524_AMRSEG0006,NODE_35_length_62916_cov_18.115723,negative,30053-31312,100.0,99.6,,,,,,945.0,,
ERR274524,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274524_AMRSEG0007,NODE_3_length_316184_cov_17.583787,positive,43769-44455,100.0,84.28,,,,,,945.0,,
ERR274524,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274524_AMRSEG0008,NODE_48_length_44379_cov_18.951247,negative,7000-7431,100.0,93.06,,,,,,945.0,,
ERR274524,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274524_AMRSEG0009,NODE_4_length_272432_cov_18.818010,positive,124631-128116,98.94,81.01,,,,,,945.0,,
ERR274524,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274524_AMRSEG0010,NODE_6_length_209079_cov_16.928944,positive,104094-104438,100.0,99.71,,,,,,945.0,,
ERR274525,smegmatis,1772,AAC(3)-IV,ARO:3002539,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,"AAC(3)-IV is a plasmid-encoded aminoglycoside acetyltransferase in E. coli, C. jejuni and P. stutzeri.",ERR274525_AMRSEG0001,NODE_108_length_4931_cov_506.524091,negative,3628-4404,100.0,99.74,,,,,,945.0,,
ERR274525,smegmatis,1772,APH(3')-IIa,ARO:3002644,antibiotic inactivation,Escherichia coli,aminoglycoside antibiotic,APH(3')-IIa is a transposon-encoded aminoglycoside phosphotransferase in E. coli.,ERR274525_AMRSEG0002,NODE_11_length_161389_cov_14.655420,positive,99726-100520,100.0,98.99,,,,,,945.0,,
ERR274525,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,ERR274525_AMRSEG0003,NODE_17_length_114988_cov_11.256431,positive,104053-104397,100.0,99.71,,,,,,945.0,,
ERR274525,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",ERR274525_AMRSEG0004,NODE_2_length_272464_cov_12.653674,negative,144349-147834,98.94,81.01,,,,,,945.0,,
ERR274525,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,ERR274525_AMRSEG0005,NODE_32_length_75024_cov_12.140310,negative,30090-30776,100.0,84.28,,,,,,945.0,,
ERR274525,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,ERR274525_AMRSEG0006,NODE_38_length_62889_cov_12.918035,negative,30042-31301,100.0,99.6,,,,,,945.0,,
ERR274525,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,ERR274525_AMRSEG0007,NODE_55_length_42830_cov_13.941421,positive,39029-40543,100.0,99.87,,,,,,945.0,,
ERR274525,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,ERR274525_AMRSEG0008,NODE_58_length_37626_cov_12.775889,positive,29635-30066,100.0,93.06,,,,,,945.0,,
ERR274525,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,ERR274525_AMRSEG0009,NODE_6_length_215563_cov_12.817315,negative,119060-120220,100.0,97.85,,,,,,945.0,,
ERR274525,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,ERR274525_AMRSEG0010,NODE_7_length_200889_cov_13.786588,negative,122122-122754,100.0,99.05,,,,,,945.0,,
GCF_000521845.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_000521845.1_AMRSEG0001,NZ_JAJD01000090.1,positive,114826-115458,100.0,100.0,,,,,2014/1/23,15.0,,
GCF_000521845.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_000521845.1_AMRSEG0002,NZ_JAJD01000095.1,negative,131818-132504,100.0,84.13,,,,,2014/1/23,15.0,,
GCF_000521845.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_000521845.1_AMRSEG0003,NZ_JAJD01000117.1,positive,104089-104433,100.0,100.0,,,,,2014/1/23,15.0,,
GCF_000521845.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_000521845.1_AMRSEG0004,NZ_KI929241.1,positive,4718-5977,100.0,100.0,,,,,2014/1/23,15.0,,
GCF_000521845.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_000521845.1_AMRSEG0005,NZ_KI929242.1,positive,162787-163218,100.0,93.52,,,,,2014/1/23,15.0,,
GCF_000521845.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_000521845.1_AMRSEG0006,NZ_KI929247.1,positive,57678-61163,98.94,81.06,,,,,2014/1/23,15.0,,
GCF_000521845.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_000521845.1_AMRSEG0007,NZ_KI929257.1,negative,61318-62832,100.0,99.87,,,,,2014/1/23,15.0,,
GCF_000521845.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_000521845.1_AMRSEG0008,NZ_KI929258.1,positive,72652-73812,100.0,99.91,,,,,2014/1/23,15.0,,
GCF_004307055.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_004307055.1_AMRSEG0005,NZ_SIJM01000023.1,negative,61454-62614,100.0,99.91,,,,,2019/2/26,15.0,,
GCF_004307055.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_004307055.1_AMRSEG0006,NZ_SIJM01000025.1,negative,3860-4492,100.0,100.0,,,,,2019/2/26,15.0,,
GCF_004307055.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_004307055.1_AMRSEG0007,NZ_SIJM01000027.1,negative,61300-62814,100.0,99.87,,,,,2019/2/26,15.0,,
GCF_004307055.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_004307055.1_AMRSEG0008,NZ_SIJM01000030.1,positive,57714-61199,98.94,81.06,,,,,2019/2/26,15.0,,
GCF_004309955.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_004309955.1_AMRSEG0001,NZ_SITY01000007.1,negative,19259-19690,100.0,93.52,,,,,2019/2/27,15.0,,
GCF_004309955.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_004309955.1_AMRSEG0002,NZ_SITY01000010.1,positive,5457-6716,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004309955.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_004309955.1_AMRSEG0003,NZ_SITY01000018.1,negative,61454-62614,100.0,99.91,,,,,2019/2/27,15.0,,
GCF_004309955.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_004309955.1_AMRSEG0004,NZ_SITY01000019.1,negative,3860-4492,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004309955.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_004309955.1_AMRSEG0005,NZ_SITY01000020.1,positive,52121-53635,100.0,99.87,,,,,2019/2/27,15.0,,
GCF_004309955.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_004309955.1_AMRSEG0006,NZ_SITY01000021.1,positive,12917-13261,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004309955.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_004309955.1_AMRSEG0007,NZ_SITY01000027.1,negative,39761-43246,98.94,81.06,,,,,2019/2/27,15.0,,
GCF_004309955.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_004309955.1_AMRSEG0008,NZ_SITY01000043.1,negative,48992-49678,100.0,84.13,,,,,2019/2/27,15.0,,
GCF_004310045.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_004310045.1_AMRSEG0001,NZ_SIUA01000004.1,positive,104075-104419,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310045.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_004310045.1_AMRSEG0002,NZ_SIUA01000007.1,positive,5457-6716,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310045.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_004310045.1_AMRSEG0003,NZ_SIUA01000011.1,negative,131806-132492,100.0,84.13,,,,,2019/2/27,15.0,,
GCF_004310045.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_004310045.1_AMRSEG0004,NZ_SIUA01000016.1,positive,71507-72667,100.0,99.91,,,,,2019/2/27,15.0,,
GCF_004310045.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_004310045.1_AMRSEG0005,NZ_SIUA01000020.1,positive,114813-115445,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310045.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_004310045.1_AMRSEG0006,NZ_SIUA01000024.1,negative,61247-62761,100.0,99.87,,,,,2019/2/27,15.0,,
GCF_004310045.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_004310045.1_AMRSEG0007,NZ_SIUA01000025.1,positive,57714-61199,98.94,81.06,,,,,2019/2/27,15.0,,
GCF_004310045.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_004310045.1_AMRSEG0008,NZ_SIUA01000053.1,positive,27758-28189,100.0,93.52,,,,,2019/2/27,15.0,,
GCF_004310055.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_004310055.1_AMRSEG0001,NZ_SITV01000001.1,positive,52120-53634,100.0,99.87,,,,,2019/2/27,15.0,,
GCF_004310055.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_004310055.1_AMRSEG0002,NZ_SITV01000006.1,positive,104075-104419,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310055.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_004310055.1_AMRSEG0003,NZ_SITV01000014.1,positive,5457-6716,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310055.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_004310055.1_AMRSEG0004,NZ_SITV01000016.1,negative,9678-10109,100.0,93.52,,,,,2019/2/27,15.0,,
GCF_004310055.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_004310055.1_AMRSEG0005,NZ_SITV01000020.1,negative,131806-132492,100.0,84.13,,,,,2019/2/27,15.0,,
GCF_004310055.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_004310055.1_AMRSEG0006,NZ_SITV01000023.1,positive,71179-72339,100.0,99.91,,,,,2019/2/27,15.0,,
GCF_004310055.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_004310055.1_AMRSEG0007,NZ_SITV01000026.1,negative,3860-4492,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310055.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_004310055.1_AMRSEG0008,NZ_SITV01000029.1,negative,39756-43241,98.94,81.06,,,,,2019/2/27,15.0,,
GCF_004310075.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_004310075.1_AMRSEG0001,NZ_SITU01000004.1,positive,104075-104419,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310075.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_004310075.1_AMRSEG0002,NZ_SITU01000009.1,negative,20058-20489,100.0,93.52,,,,,2019/2/27,15.0,,
GCF_004310075.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_004310075.1_AMRSEG0003,NZ_SITU01000012.1,negative,168716-169975,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310075.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_004310075.1_AMRSEG0004,NZ_SITU01000020.1,negative,131806-132492,100.0,84.13,,,,,2019/2/27,15.0,,
GCF_004310075.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_004310075.1_AMRSEG0005,NZ_SITU01000023.1,positive,71507-72667,100.0,99.91,,,,,2019/2/27,15.0,,
GCF_004310075.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_004310075.1_AMRSEG0006,NZ_SITU01000025.1,positive,114812-115444,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310075.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_004310075.1_AMRSEG0007,NZ_SITU01000027.1,positive,52121-53635,100.0,99.87,,,,,2019/2/27,15.0,,
GCF_004310075.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_004310075.1_AMRSEG0008,NZ_SITU01000030.1,negative,39761-43246,98.94,81.06,,,,,2019/2/27,15.0,,
GCF_004310095.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_004310095.1_AMRSEG0001,NZ_SITZ01000002.1,positive,52121-53635,100.0,99.87,,,,,2019/2/27,15.0,,
GCF_004310095.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_004310095.1_AMRSEG0002,NZ_SITZ01000006.1,negative,103662-104006,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310095.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_004310095.1_AMRSEG0003,NZ_SITZ01000012.1,positive,163230-163661,100.0,93.52,,,,,2019/2/27,15.0,,
GCF_004310095.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_004310095.1_AMRSEG0004,NZ_SITZ01000015.1,negative,168846-170105,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310095.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_004310095.1_AMRSEG0005,NZ_SITZ01000020.1,positive,8108-8794,100.0,84.13,,,,,2019/2/27,15.0,,
GCF_004310095.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_004310095.1_AMRSEG0006,NZ_SITZ01000023.1,positive,71507-72667,100.0,99.91,,,,,2019/2/27,15.0,,
GCF_004310095.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_004310095.1_AMRSEG0007,NZ_SITZ01000026.1,negative,3860-4492,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310095.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_004310095.1_AMRSEG0008,NZ_SITZ01000029.1,positive,57714-61199,98.94,81.06,,,,,2019/2/27,15.0,,
GCF_004310125.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_004310125.1_AMRSEG0001,NZ_SITP01000002.1,positive,52120-53634,100.0,99.87,,,,,2019/2/27,15.0,,
GCF_004310125.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_004310125.1_AMRSEG0002,NZ_SITP01000006.1,positive,104075-104419,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310125.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_004310125.1_AMRSEG0003,NZ_SITP01000012.1,positive,162886-163317,100.0,93.52,,,,,2019/2/27,15.0,,
GCF_004310125.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_004310125.1_AMRSEG0004,NZ_SITP01000015.1,negative,168716-169975,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310125.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_004310125.1_AMRSEG0005,NZ_SITP01000020.1,negative,131806-132492,100.0,84.13,,,,,2019/2/27,15.0,,
GCF_004310125.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_004310125.1_AMRSEG0006,NZ_SITP01000023.1,positive,71179-72339,100.0,99.91,,,,,2019/2/27,15.0,,
GCF_004310125.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_004310125.1_AMRSEG0007,NZ_SITP01000026.1,positive,114813-115445,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310125.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_004310125.1_AMRSEG0008,NZ_SITP01000029.1,positive,57714-61199,98.94,81.06,,,,,2019/2/27,15.0,,
GCF_004310135.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_004310135.1_AMRSEG0001,NZ_SITW01000002.1,negative,238378-239892,100.0,99.87,,,,,2019/2/27,15.0,,
GCF_004310135.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_004310135.1_AMRSEG0002,NZ_SITW01000006.1,positive,104075-104419,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310135.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_004310135.1_AMRSEG0003,NZ_SITW01000012.1,positive,163230-163661,100.0,93.52,,,,,2019/2/27,15.0,,
GCF_004310135.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_004310135.1_AMRSEG0004,NZ_SITW01000015.1,positive,5457-6716,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310135.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_004310135.1_AMRSEG0005,NZ_SITW01000020.1,negative,131806-132492,100.0,84.13,,,,,2019/2/27,15.0,,
GCF_004310135.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_004310135.1_AMRSEG0006,NZ_SITW01000023.1,positive,71507-72667,100.0,99.91,,,,,2019/2/27,15.0,,
GCF_004310135.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_004310135.1_AMRSEG0007,NZ_SITW01000026.1,positive,114813-115445,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310135.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_004310135.1_AMRSEG0008,NZ_SITW01000029.1,negative,39761-43246,98.94,81.06,,,,,2019/2/27,15.0,,
GCF_004310145.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_004310145.1_AMRSEG0001,NZ_SITT01000002.1,positive,52120-53634,100.0,99.87,,,,,2019/2/27,15.0,,
GCF_004310145.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_004310145.1_AMRSEG0002,NZ_SITT01000006.1,positive,104075-104419,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310145.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_004310145.1_AMRSEG0003,NZ_SITT01000012.1,negative,19259-19690,100.0,93.52,,,,,2019/2/27,15.0,,
GCF_004310145.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_004310145.1_AMRSEG0004,NZ_SITT01000016.1,positive,4705-5964,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310145.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_004310145.1_AMRSEG0005,NZ_SITT01000020.1,negative,131806-132492,100.0,84.13,,,,,2019/2/27,15.0,,
GCF_004310145.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_004310145.1_AMRSEG0006,NZ_SITT01000023.1,negative,61454-62614,100.0,99.91,,,,,2019/2/27,15.0,,
GCF_004310145.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_004310145.1_AMRSEG0007,NZ_SITT01000026.1,negative,3860-4492,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310145.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_004310145.1_AMRSEG0008,NZ_SITT01000029.1,positive,57714-61199,98.94,81.06,,,,,2019/2/27,15.0,,
GCF_004310165.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_004310165.1_AMRSEG0001,NZ_SITQ01000002.1,negative,238320-239834,100.0,99.87,,,,,2019/2/27,15.0,,
GCF_004310165.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_004310165.1_AMRSEG0002,NZ_SITQ01000006.1,positive,104075-104419,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310165.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_004310165.1_AMRSEG0003,NZ_SITQ01000012.1,positive,163230-163661,100.0,93.52,,,,,2019/2/27,15.0,,
GCF_004310165.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_004310165.1_AMRSEG0004,NZ_SITQ01000015.1,positive,5457-6716,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310165.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_004310165.1_AMRSEG0005,NZ_SITQ01000020.1,positive,8512-9198,100.0,84.13,,,,,2019/2/27,15.0,,
GCF_004310165.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_004310165.1_AMRSEG0006,NZ_SITQ01000023.1,positive,71563-72723,100.0,99.91,,,,,2019/2/27,15.0,,
GCF_004310165.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_004310165.1_AMRSEG0007,NZ_SITQ01000026.1,negative,3860-4492,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310165.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_004310165.1_AMRSEG0008,NZ_SITQ01000029.1,positive,57714-61199,98.94,81.06,,,,,2019/2/27,15.0,,
GCF_004310195.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_004310195.1_AMRSEG0001,NZ_SITX01000002.1,positive,52120-53634,100.0,99.87,,,,,2019/2/27,15.0,,
GCF_004310195.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_004310195.1_AMRSEG0002,NZ_SITX01000006.1,positive,104075-104419,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310195.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_004310195.1_AMRSEG0003,NZ_SITX01000013.1,positive,162886-163317,100.0,93.52,,,,,2019/2/27,15.0,,
GCF_004310195.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_004310195.1_AMRSEG0004,NZ_SITX01000015.1,negative,168716-169975,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310195.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_004310195.1_AMRSEG0005,NZ_SITX01000020.1,positive,8108-8794,100.0,84.13,,,,,2019/2/27,15.0,,
GCF_004310195.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_004310195.1_AMRSEG0006,NZ_SITX01000023.1,negative,61454-62614,100.0,99.91,,,,,2019/2/27,15.0,,
GCF_004310195.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_004310195.1_AMRSEG0007,NZ_SITX01000025.1,negative,3860-4492,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310195.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_004310195.1_AMRSEG0008,NZ_SITX01000029.1,negative,39755-43240,98.94,81.06,,,,,2019/2/27,15.0,,
GCF_004310225.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_004310225.1_AMRSEG0001,NZ_SITS01000002.1,negative,238378-239892,100.0,99.87,,,,,2019/2/27,15.0,,
GCF_004310225.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_004310225.1_AMRSEG0002,NZ_SITS01000006.1,positive,104075-104419,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310225.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_004310225.1_AMRSEG0003,NZ_SITS01000012.1,positive,163230-163661,100.0,93.52,,,,,2019/2/27,15.0,,
GCF_004310225.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_004310225.1_AMRSEG0004,NZ_SITS01000015.1,negative,168716-169975,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310225.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_004310225.1_AMRSEG0005,NZ_SITS01000020.1,negative,131806-132492,100.0,84.13,,,,,2019/2/27,15.0,,
GCF_004310225.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_004310225.1_AMRSEG0006,NZ_SITS01000023.1,positive,71563-72723,100.0,99.91,,,,,2019/2/27,15.0,,
GCF_004310225.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_004310225.1_AMRSEG0007,NZ_SITS01000026.1,positive,115286-115918,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310225.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_004310225.1_AMRSEG0008,NZ_SITS01000029.1,positive,57714-61199,98.94,81.06,,,,,2019/2/27,15.0,,
GCF_004310235.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_004310235.1_AMRSEG0001,NZ_SITR01000003.1,negative,238320-239834,100.0,99.87,,,,,2019/2/27,15.0,,
GCF_004310235.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_004310235.1_AMRSEG0002,NZ_SITR01000007.1,negative,103662-104006,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310235.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_004310235.1_AMRSEG0003,NZ_SITR01000013.1,negative,19259-19690,100.0,93.52,,,,,2019/2/27,15.0,,
GCF_004310235.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_004310235.1_AMRSEG0004,NZ_SITR01000016.1,positive,4705-5964,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310235.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_004310235.1_AMRSEG0005,NZ_SITR01000020.1,positive,8512-9198,100.0,84.13,,,,,2019/2/27,15.0,,
GCF_004310235.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_004310235.1_AMRSEG0006,NZ_SITR01000023.1,positive,71563-72723,100.0,99.91,,,,,2019/2/27,15.0,,
GCF_004310235.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_004310235.1_AMRSEG0007,NZ_SITR01000025.1,negative,3860-4492,100.0,100.0,,,,,2019/2/27,15.0,,
GCF_004310235.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_004310235.1_AMRSEG0008,NZ_SITR01000028.1,positive,57714-61199,98.94,81.06,,,,,2019/2/27,15.0,,
GCF_015223215.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_015223215.1_AMRSEG0001,NZ_JADFCD010000002.1,positive,52120-53634,100.0,99.87,,,,,2020/11/3,15.0,,
GCF_015223215.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_015223215.1_AMRSEG0002,NZ_JADFCD010000006.1,positive,104075-104419,100.0,100.0,,,,,2020/11/3,15.0,,
GCF_015223215.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_015223215.1_AMRSEG0003,NZ_JADFCD010000012.1,positive,162886-163317,100.0,93.52,,,,,2020/11/3,15.0,,
GCF_015223215.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_015223215.1_AMRSEG0004,NZ_JADFCD010000015.1,negative,168716-169975,100.0,100.0,,,,,2020/11/3,15.0,,
GCF_015223215.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_015223215.1_AMRSEG0005,NZ_JADFCD010000020.1,positive,8108-8794,100.0,84.13,,,,,2020/11/3,15.0,,
GCF_015223215.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_015223215.1_AMRSEG0006,NZ_JADFCD010000023.1,positive,71179-72339,100.0,99.91,,,,,2020/11/3,15.0,,
GCF_015223215.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_015223215.1_AMRSEG0007,NZ_JADFCD010000026.1,negative,3860-4492,100.0,100.0,,,,,2020/11/3,15.0,,
GCF_015223215.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_015223215.1_AMRSEG0008,NZ_JADFCD010000030.1,positive,57714-61199,98.94,81.06,,,,,2020/11/3,15.0,,
GCF_015223255.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_015223255.1_AMRSEG0001,NZ_JADFCE010000002.1,negative,238318-239832,100.0,99.87,,,,,2020/11/3,15.0,,
GCF_015223255.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_015223255.1_AMRSEG0002,NZ_JADFCE010000006.1,negative,103662-104006,100.0,100.0,,,,,2020/11/3,15.0,,
GCF_015223255.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_015223255.1_AMRSEG0003,NZ_JADFCE010000012.1,positive,163230-163661,100.0,93.52,,,,,2020/11/3,15.0,,
GCF_015223255.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_015223255.1_AMRSEG0004,NZ_JADFCE010000015.1,positive,5457-6716,100.0,100.0,,,,,2020/11/3,15.0,,
GCF_015223255.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_015223255.1_AMRSEG0005,NZ_JADFCE010000020.1,positive,8108-8794,100.0,84.13,,,,,2020/11/3,15.0,,
GCF_015223255.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_015223255.1_AMRSEG0006,NZ_JADFCE010000023.1,positive,71179-72339,100.0,99.91,,,,,2020/11/3,15.0,,
GCF_015223255.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_015223255.1_AMRSEG0007,NZ_JADFCE010000025.1,positive,114813-115445,100.0,100.0,,,,,2020/11/3,15.0,,
GCF_015223255.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_015223255.1_AMRSEG0008,NZ_JADFCE010000030.1,negative,36928-40413,98.94,81.06,,,,,2020/11/3,15.0,,
GCF_015223265.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_015223265.1_AMRSEG0001,NZ_JADFCF010000002.1,positive,52120-53634,100.0,99.87,,,,,2020/11/3,15.0,,
GCF_015223265.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_015223265.1_AMRSEG0002,NZ_JADFCF010000006.1,negative,103662-104006,100.0,100.0,,,,,2020/11/3,15.0,,
GCF_015223265.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_015223265.1_AMRSEG0003,NZ_JADFCF010000012.1,positive,162886-163317,100.0,93.52,,,,,2020/11/3,15.0,,
GCF_015223265.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_015223265.1_AMRSEG0004,NZ_JADFCF010000015.1,positive,5457-6716,100.0,100.0,,,,,2020/11/3,15.0,,
GCF_015223265.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_015223265.1_AMRSEG0005,NZ_JADFCF010000020.1,positive,8108-8794,100.0,84.13,,,,,2020/11/3,15.0,,
GCF_015223265.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_015223265.1_AMRSEG0006,NZ_JADFCF010000023.1,negative,61454-62614,100.0,99.91,,,,,2020/11/3,15.0,,
GCF_015223265.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_015223265.1_AMRSEG0007,NZ_JADFCF010000025.1,positive,114813-115445,100.0,100.0,,,,,2020/11/3,15.0,,
GCF_015223265.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_015223265.1_AMRSEG0008,NZ_JADFCF010000030.1,positive,57714-61199,98.94,81.06,,,,,2020/11/3,15.0,,
GCF_015223295.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_015223295.1_AMRSEG0001,NZ_JADFCG010000003.1,negative,238318-239832,100.0,99.87,,,,,2020/11/3,15.0,,
GCF_015223295.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_015223295.1_AMRSEG0002,NZ_JADFCG010000007.1,negative,103662-104006,100.0,100.0,,,,,2020/11/3,15.0,,
GCF_015223295.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_015223295.1_AMRSEG0003,NZ_JADFCG010000013.1,negative,19259-19690,100.0,93.52,,,,,2020/11/3,15.0,,
GCF_015223295.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_015223295.1_AMRSEG0004,NZ_JADFCG010000015.1,positive,5457-6716,100.0,100.0,,,,,2020/11/3,15.0,,
GCF_015223295.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_015223295.1_AMRSEG0005,NZ_JADFCG010000020.1,negative,131806-132492,100.0,84.13,,,,,2020/11/3,15.0,,
GCF_015223295.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_015223295.1_AMRSEG0006,NZ_JADFCG010000023.1,positive,71179-72339,100.0,99.91,,,,,2020/11/3,15.0,,
GCF_015223295.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_015223295.1_AMRSEG0007,NZ_JADFCG010000025.1,negative,3860-4492,100.0,100.0,,,,,2020/11/3,15.0,,
GCF_015223295.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_015223295.1_AMRSEG0008,NZ_JADFCG010000029.1,positive,57714-61199,98.94,81.06,,,,,2020/11/3,15.0,,
GCF_015223305.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_015223305.1_AMRSEG0001,NZ_JADFCH010000002.1,positive,52120-53634,100.0,99.87,,,,,2020/11/3,15.0,,
GCF_015223305.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_015223305.1_AMRSEG0002,NZ_JADFCH010000006.1,negative,103662-104006,100.0,100.0,,,,,2020/11/3,15.0,,
GCF_015223305.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_015223305.1_AMRSEG0003,NZ_JADFCH010000012.1,negative,19259-19690,100.0,93.52,,,,,2020/11/3,15.0,,
GCF_015223305.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_015223305.1_AMRSEG0004,NZ_JADFCH010000015.1,positive,5457-6716,100.0,100.0,,,,,2020/11/3,15.0,,
GCF_015223305.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_015223305.1_AMRSEG0005,NZ_JADFCH010000020.1,negative,131806-132492,100.0,84.13,,,,,2020/11/3,15.0,,
GCF_015223305.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_015223305.1_AMRSEG0006,NZ_JADFCH010000023.1,negative,61454-62614,100.0,99.91,,,,,2020/11/3,15.0,,
GCF_015223305.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_015223305.1_AMRSEG0007,NZ_JADFCH010000026.1,positive,114813-115445,100.0,100.0,,,,,2020/11/3,15.0,,
GCF_015223305.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_015223305.1_AMRSEG0008,NZ_JADFCH010000029.1,positive,57714-61199,98.94,81.06,,,,,2020/11/3,15.0,,
GCF_015223325.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_015223325.1_AMRSEG0001,NZ_JADFCI010000002.1,negative,238378-239892,100.0,99.87,,,,,2020/11/3,15.0,,
GCF_015223325.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_015223325.1_AMRSEG0002,NZ_JADFCI010000005.1,positive,104075-104419,100.0,100.0,,,,,2020/11/3,15.0,,
GCF_015223325.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_015223325.1_AMRSEG0003,NZ_JADFCI010000012.1,negative,19259-19690,100.0,93.52,,,,,2020/11/3,15.0,,
GCF_015223325.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_015223325.1_AMRSEG0004,NZ_JADFCI010000015.1,negative,168846-170105,100.0,100.0,,,,,2020/11/3,15.0,,
GCF_015223325.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_015223325.1_AMRSEG0005,NZ_JADFCI010000020.1,negative,131806-132492,100.0,84.13,,,,,2020/11/3,15.0,,
GCF_015223325.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_015223325.1_AMRSEG0006,NZ_JADFCI010000023.1,positive,71179-72339,100.0,99.91,,,,,2020/11/3,15.0,,
GCF_015223325.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_015223325.1_AMRSEG0007,NZ_JADFCI010000026.1,negative,3860-4492,100.0,100.0,,,,,2020/11/3,15.0,,
GCF_015223325.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_015223325.1_AMRSEG0008,NZ_JADFCI010000029.1,negative,39755-43240,98.94,81.06,,,,,2020/11/3,15.0,,
GCF_015321325.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_015321325.1_AMRSEG0001,NZ_JADIJV010000002.1,positive,52120-53634,100.0,99.87,,,,,2020/11/9,15.0,,
GCF_015321325.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_015321325.1_AMRSEG0002,NZ_JADIJV010000006.1,positive,104075-104419,100.0,100.0,,,,,2020/11/9,15.0,,
GCF_015321325.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_015321325.1_AMRSEG0003,NZ_JADIJV010000012.1,positive,162886-163317,100.0,93.52,,,,,2020/11/9,15.0,,
GCF_015321325.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_015321325.1_AMRSEG0004,NZ_JADIJV010000015.1,positive,5457-6716,100.0,100.0,,,,,2020/11/9,15.0,,
GCF_015321325.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_015321325.1_AMRSEG0005,NZ_JADIJV010000020.1,positive,8108-8794,100.0,84.13,,,,,2020/11/9,15.0,,
GCF_015321325.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_015321325.1_AMRSEG0006,NZ_JADIJV010000023.1,negative,61454-62614,100.0,99.91,,,,,2020/11/9,15.0,,
GCF_015321325.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_015321325.1_AMRSEG0007,NZ_JADIJV010000026.1,positive,114813-115445,100.0,100.0,,,,,2020/11/9,15.0,,
GCF_015321325.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_015321325.1_AMRSEG0008,NZ_JADIJV010000029.1,negative,39755-43240,98.94,81.06,,,,,2020/11/9,15.0,,
GCF_015321375.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_015321375.1_AMRSEG0001,NZ_JADIJU010000003.1,positive,52120-53634,100.0,99.87,,,,,2020/11/9,15.0,,
GCF_015321375.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_015321375.1_AMRSEG0002,NZ_JADIJU010000007.1,positive,104075-104419,100.0,100.0,,,,,2020/11/9,15.0,,
GCF_015321375.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_015321375.1_AMRSEG0003,NZ_JADIJU010000013.1,negative,19259-19690,100.0,93.52,,,,,2020/11/9,15.0,,
GCF_015321375.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_015321375.1_AMRSEG0004,NZ_JADIJU010000015.1,negative,168846-170105,100.0,100.0,,,,,2020/11/9,15.0,,
GCF_015321375.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_015321375.1_AMRSEG0005,NZ_JADIJU010000020.1,positive,8108-8794,100.0,84.13,,,,,2020/11/9,15.0,,
GCF_015321375.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_015321375.1_AMRSEG0006,NZ_JADIJU010000023.1,positive,71179-72339,100.0,99.91,,,,,2020/11/9,15.0,,
GCF_015321375.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_015321375.1_AMRSEG0007,NZ_JADIJU010000025.1,negative,3860-4492,100.0,100.0,,,,,2020/11/9,15.0,,
GCF_015321375.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_015321375.1_AMRSEG0008,NZ_JADIJU010000028.1,negative,39755-43240,98.94,81.06,,,,,2020/11/9,15.0,,
GCF_900453465.1,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_900453465.1_AMRSEG0001,NZ_UGQO01000001.1,negative,317604-318290,100.0,84.13,,,,,2018/8/1,15.0,,
GCF_900453465.1,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,GCF_900453465.1_AMRSEG0002,NZ_UGQO01000001.1,positive,519181-520341,100.0,99.91,,,,,2018/8/1,15.0,,
GCF_900453465.1,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_900453465.1_AMRSEG0003,NZ_UGQO01000001.1,negative,794856-798341,98.94,81.06,,,,,2018/8/1,15.0,,
GCF_900453465.1,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_900453465.1_AMRSEG0004,NZ_UGQO01000001.1,negative,966706-967137,100.0,93.52,,,,,2018/8/1,15.0,,
GCF_900453465.1,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,GCF_900453465.1_AMRSEG0005,NZ_UGQO01000001.1,positive,1691124-1691756,100.0,100.0,,,,,2018/8/1,15.0,,
GCF_900453465.1,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_900453465.1_AMRSEG0006,NZ_UGQO01000001.1,negative,2894604-2896118,100.0,99.87,,,,,2018/8/1,15.0,,
GCF_900453465.1,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_900453465.1_AMRSEG0007,NZ_UGQO01000002.1,negative,329636-330895,100.0,100.0,,,,,2018/8/1,15.0,,
GCF_900453465.1,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_900453465.1_AMRSEG0008,NZ_UGQO01000002.1,negative,1689482-1689826,100.0,100.0,,,,,2018/8/1,15.0,,
SRR13052616,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13052616_AMRSEG0006,NODE_23_length_133808_cov_46.148626,positive,71187-72347,100.0,99.91,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5570 (LigD protein), MSMEG_5580 (Ku protein)",Poland,,15.0,,
SRR13052616,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13052616_AMRSEG0007,NODE_28_length_100948_cov_48.342192,negative,39763-43248,98.94,81.06,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5570 (LigD protein), MSMEG_5580 (Ku protein)",Poland,,15.0,,
SRR13052616,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13052616_AMRSEG0008,NODE_31_length_93967_cov_51.902539,positive,89468-90100,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5570 (LigD protein), MSMEG_5580 (Ku protein)",Poland,,15.0,,
SRR13052793,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13052793_AMRSEG0001,NODE_104_length_10916_cov_19.504377,positive,4713-5972,100.0,100.0,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 B,Poland,,15.0,,
SRR13052793,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13052793_AMRSEG0002,NODE_11_length_140615_cov_19.498904,positive,8116-8802,100.0,84.13,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 B,Poland,,15.0,,
SRR13052793,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13052793_AMRSEG0003,NODE_12_length_137069_cov_20.340394,positive,12927-13271,100.0,100.0,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 B,Poland,,15.0,,
SRR13052793,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13052793_AMRSEG0004,NODE_18_length_118057_cov_18.707985,negative,64414-65928,100.0,99.87,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 B,Poland,,15.0,,
SRR13052793,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13052793_AMRSEG0005,NODE_24_length_93967_cov_21.753323,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 B,Poland,,15.0,,
SRR13052793,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13052793_AMRSEG0006,NODE_31_length_77817_cov_19.226458,negative,36141-37301,100.0,99.91,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 B,Poland,,15.0,,
SRR13052793,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13052793_AMRSEG0007,NODE_57_length_46336_cov_19.743522,positive,4619-8104,98.94,81.06,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 B,Poland,,15.0,,
SRR13052793,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13052793_AMRSEG0008,NODE_5_length_173007_cov_20.333102,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 B,Poland,,15.0,,
SRR13052794,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13052794_AMRSEG0001,NODE_10_length_173008_cov_34.599543,positive,162892-163323,100.0,93.52,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 A,Poland,,15.0,,
SRR13052794,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13052794_AMRSEG0002,NODE_13_length_162534_cov_32.271051,positive,4714-5973,100.0,100.0,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 A,Poland,,15.0,,
SRR13052794,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13052794_AMRSEG0003,NODE_14_length_160396_cov_33.806222,negative,123799-124143,100.0,100.0,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 A,Poland,,15.0,,
SRR13052794,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13052794_AMRSEG0004,NODE_18_length_140615_cov_33.812874,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 A,Poland,,15.0,,
SRR13052794,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13052794_AMRSEG0005,NODE_1_length_292864_cov_33.604124,positive,52129-53643,100.0,99.87,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 A,Poland,,15.0,,
SRR13052794,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13052794_AMRSEG0006,NODE_25_length_108562_cov_32.145845,negative,36165-37325,100.0,99.91,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 A,Poland,,15.0,,
SRR13052794,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13052794_AMRSEG0007,NODE_27_length_100950_cov_34.085293,negative,39765-43250,98.94,81.06,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 A,Poland,,15.0,,
SRR13052794,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13052794_AMRSEG0008,NODE_30_length_94063_cov_36.865968,positive,89564-90196,100.0,100.0,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 A,Poland,,15.0,,
SRR13052795,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13052795_AMRSEG0001,NODE_10_length_173007_cov_35.964850,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 F,Poland,,15.0,,
SRR13052795,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13052795_AMRSEG0002,NODE_13_length_163285_cov_35.293471,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 F,Poland,,15.0,,
SRR13052795,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13052795_AMRSEG0003,NODE_15_length_140615_cov_34.932872,positive,8116-8802,100.0,84.13,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 F,Poland,,15.0,,
SRR13052795,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13052795_AMRSEG0004,NODE_1_length_262274_cov_34.067461,positive,52130-53644,100.0,99.87,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 F,Poland,,15.0,,
SRR13052795,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13052795_AMRSEG0005,NODE_25_length_108615_cov_33.608142,positive,71187-72347,100.0,99.91,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 F,Poland,,15.0,,
SRR13052795,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13052795_AMRSEG0006,NODE_27_length_100948_cov_35.407008,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 F,Poland,,15.0,,
SRR13052795,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13052795_AMRSEG0007,NODE_30_length_93967_cov_38.439076,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 F,Poland,,15.0,,
SRR13052795,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13052795_AMRSEG0008,NODE_3_length_228385_cov_34.548278,negative,123799-124143,100.0,100.0,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 F,Poland,,15.0,,
SRR13052798,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13052798_AMRSEG0001,NODE_12_length_140615_cov_28.440421,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 C,Poland,,15.0,,
SRR13052798,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13052798_AMRSEG0002,NODE_16_length_137074_cov_29.010875,negative,123799-124143,100.0,100.0,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 C,Poland,,15.0,,
SRR13052798,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13052798_AMRSEG0003,NODE_24_length_101383_cov_27.061952,negative,47740-49254,100.0,99.87,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 C,Poland,,15.0,,
SRR13052798,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13052798_AMRSEG0004,NODE_27_length_93967_cov_31.801020,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 C,Poland,,15.0,,
SRR13052798,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13052798_AMRSEG0005,NODE_45_length_58004_cov_26.474241,negative,36194-37354,100.0,99.91,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 C,Poland,,15.0,,
SRR13052798,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13052798_AMRSEG0006,NODE_5_length_172377_cov_29.317403,negative,9056-9487,100.0,93.52,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 C,Poland,,15.0,,
SRR13052798,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13052798_AMRSEG0007,NODE_60_length_43983_cov_28.769536,positive,736-4221,98.94,81.06,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 C,Poland,,15.0,,
SRR13052798,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13052798_AMRSEG0008,NODE_7_length_163352_cov_28.585716,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis MC2 155 C,Poland,,15.0,,
SRR13052799,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13052799_AMRSEG0001,NODE_10_length_175577_cov_30.419904,positive,5465-6724,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) J",Poland,,15.0,,
SRR13052799,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13052799_AMRSEG0002,NODE_12_length_173007_cov_30.137206,positive,162891-163322,100.0,93.52,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) J",Poland,,15.0,,
SRR13052799,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13052799_AMRSEG0003,NODE_19_length_140615_cov_29.927571,negative,131814-132500,100.0,84.13,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) J",Poland,,15.0,,
SRR13052799,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13052799_AMRSEG0004,NODE_1_length_260541_cov_29.149763,negative,206898-208412,100.0,99.87,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) J",Poland,,15.0,,
SRR13052799,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13052799_AMRSEG0005,NODE_25_length_108586_cov_28.600619,positive,71187-72347,100.0,99.91,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) J",Poland,,15.0,,
SRR13052799,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13052799_AMRSEG0006,NODE_26_length_100952_cov_30.058302,negative,39763-43248,98.94,81.06,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) J",Poland,,15.0,,
SRR13052799,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13052799_AMRSEG0007,NODE_29_length_93967_cov_32.766772,negative,3868-4500,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) J",Poland,,15.0,,
SRR13052799,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13052799_AMRSEG0008,NODE_4_length_228330_cov_29.738561,positive,104294-104638,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) J",Poland,,15.0,,
SRR13052801,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13052801_AMRSEG0001,NODE_10_length_173007_cov_30.194271,negative,9686-10117,100.0,93.52,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) H",Poland,,15.0,,
SRR13052801,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13052801_AMRSEG0002,NODE_15_length_140615_cov_29.610578,negative,131814-132500,100.0,84.13,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) H",Poland,,15.0,,
SRR13052801,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13052801_AMRSEG0003,NODE_1_length_291305_cov_29.378973,positive,52129-53643,100.0,99.87,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) H",Poland,,15.0,,
SRR13052801,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13052801_AMRSEG0004,NODE_20_length_116715_cov_29.312588,negative,103445-103789,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) H",Poland,,15.0,,
SRR13052801,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13052801_AMRSEG0005,NODE_23_length_108678_cov_27.995443,negative,36266-37426,100.0,99.91,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) H",Poland,,15.0,,
SRR13052801,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13052801_AMRSEG0006,NODE_26_length_100948_cov_29.484016,positive,57701-61186,98.94,81.06,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) H",Poland,,15.0,,
SRR13052801,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13052801_AMRSEG0007,NODE_29_length_94063_cov_32.501777,positive,89564-90196,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) H",Poland,,15.0,,
SRR13052801,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13052801_AMRSEG0008,NODE_7_length_174821_cov_28.539495,positive,4709-5968,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) H",Poland,,15.0,,
SRR13052802,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13052802_AMRSEG0001,NODE_12_length_160151_cov_32.528547,negative,123574-123918,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) G",Poland,,15.0,,
SRR13052802,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13052802_AMRSEG0002,NODE_18_length_140615_cov_31.268420,positive,8116-8802,100.0,84.13,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) G",Poland,,15.0,,
SRR13052802,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13052802_AMRSEG0003,NODE_1_length_260737_cov_30.949454,negative,207094-208608,100.0,99.87,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) G",Poland,,15.0,,
SRR13052802,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13052802_AMRSEG0004,NODE_28_length_108482_cov_30.715078,positive,71187-72347,100.0,99.91,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) G",Poland,,15.0,,
SRR13052802,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13052802_AMRSEG0005,NODE_29_length_100948_cov_32.581434,negative,39763-43248,98.94,81.06,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) G",Poland,,15.0,,
SRR13052802,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13052802_AMRSEG0006,NODE_32_length_94063_cov_35.098064,negative,3868-4500,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) G",Poland,,15.0,,
SRR13052802,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13052802_AMRSEG0007,NODE_7_length_174803_cov_30.989007,positive,4689-5948,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) G",Poland,,15.0,,
SRR13052802,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13052802_AMRSEG0008,NODE_9_length_173008_cov_32.493556,positive,162892-163323,100.0,93.52,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) G",Poland,,15.0,,
SRR13052803,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13052803_AMRSEG0001,NODE_10_length_175689_cov_35.552230,negative,168966-170225,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) F",Poland,,15.0,,
SRR13052803,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13052803_AMRSEG0002,NODE_12_length_173007_cov_35.811216,positive,162891-163322,100.0,93.52,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) F",Poland,,15.0,,
SRR13052803,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13052803_AMRSEG0003,NODE_19_length_140615_cov_35.128216,negative,131814-132500,100.0,84.13,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) F",Poland,,15.0,,
SRR13052803,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13052803_AMRSEG0004,NODE_1_length_291178_cov_34.333470,positive,52129-53643,100.0,99.87,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) F",Poland,,15.0,,
SRR13052803,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13052803_AMRSEG0005,NODE_28_length_108482_cov_33.365738,positive,71187-72347,100.0,99.91,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) F",Poland,,15.0,,
SRR13052803,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13052803_AMRSEG0006,NODE_29_length_100948_cov_35.174783,negative,39763-43248,98.94,81.06,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) F",Poland,,15.0,,
SRR13052803,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13052803_AMRSEG0007,NODE_32_length_93967_cov_38.133157,negative,3868-4500,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) F",Poland,,15.0,,
SRR13052803,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13052803_AMRSEG0008,NODE_7_length_190441_cov_35.107481,positive,66524-66868,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) F",Poland,,15.0,,
SRR13052804,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13052804_AMRSEG0001,NODE_11_length_173007_cov_32.991963,positive,162891-163322,100.0,93.52,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) E",Poland,,15.0,,
SRR13052804,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13052804_AMRSEG0002,NODE_14_length_157148_cov_31.903778,negative,150425-151684,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) E",Poland,,15.0,,
SRR13052804,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13052804_AMRSEG0003,NODE_18_length_142419_cov_32.047810,negative,105860-106204,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) E",Poland,,15.0,,
SRR13052804,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13052804_AMRSEG0004,NODE_19_length_140613_cov_31.932223,positive,8116-8802,100.0,84.13,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) E",Poland,,15.0,,
SRR13052804,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13052804_AMRSEG0005,NODE_1_length_290801_cov_30.890307,negative,237158-238672,100.0,99.87,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) E",Poland,,15.0,,
SRR13052804,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13052804_AMRSEG0006,NODE_26_length_108488_cov_30.485146,negative,36142-37302,100.0,99.91,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) E",Poland,,15.0,,
SRR13052804,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13052804_AMRSEG0007,NODE_30_length_93967_cov_35.595385,positive,89468-90100,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) E",Poland,,15.0,,
SRR13052804,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13052804_AMRSEG0008,NODE_51_length_47896_cov_32.897456,negative,39763-43248,98.94,81.06,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) E",Poland,,15.0,,
SRR13052805,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13052805_AMRSEG0001,NODE_12_length_140615_cov_25.191488,positive,8116-8802,100.0,84.13,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) D",Poland,,15.0,,
SRR13052805,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13052805_AMRSEG0002,NODE_14_length_133808_cov_24.476197,negative,61462-62622,100.0,99.91,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) D",Poland,,15.0,,
SRR13052805,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13052805_AMRSEG0003,NODE_1_length_260650_cov_24.883605,positive,52130-53644,100.0,99.87,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) D",Poland,,15.0,,
SRR13052805,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13052805_AMRSEG0004,NODE_25_length_100948_cov_25.753482,negative,39763-43248,98.94,81.06,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) D",Poland,,15.0,,
SRR13052805,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13052805_AMRSEG0005,NODE_28_length_93967_cov_28.530084,positive,89468-90100,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) D",Poland,,15.0,,
SRR13052805,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13052805_AMRSEG0006,NODE_35_length_72123_cov_22.539536,positive,36328-36672,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) D",Poland,,15.0,,
SRR13052805,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13052805_AMRSEG0007,NODE_5_length_173007_cov_26.586924,negative,9686-10117,100.0,93.52,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) D",Poland,,15.0,,
SRR13052805,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13052805_AMRSEG0008,NODE_7_length_156347_cov_24.495930,negative,150414-151673,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) D",Poland,,15.0,,
SRR13052806,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13052806_AMRSEG0001,NODE_15_length_140708_cov_28.252537,negative,131907-132593,100.0,84.13,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) C",Poland,,15.0,,
SRR13052806,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13052806_AMRSEG0002,NODE_20_length_119098_cov_28.620070,positive,13032-13376,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) C",Poland,,15.0,,
SRR13052806,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13052806_AMRSEG0003,NODE_24_length_108493_cov_26.630517,negative,36147-37307,100.0,99.91,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) C",Poland,,15.0,,
SRR13052806,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13052806_AMRSEG0004,NODE_28_length_93967_cov_30.989500,negative,3868-4500,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) C",Poland,,15.0,,
SRR13052806,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13052806_AMRSEG0005,NODE_3_length_218089_cov_26.892086,negative,164446-165960,100.0,99.87,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) C",Poland,,15.0,,
SRR13052806,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13052806_AMRSEG0006,NODE_54_length_47895_cov_28.780398,negative,39763-43248,98.94,81.06,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) C",Poland,,15.0,,
SRR13052806,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13052806_AMRSEG0007,NODE_8_length_174800_cov_27.289836,negative,168856-170115,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) C",Poland,,15.0,,
SRR13052806,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13052806_AMRSEG0008,NODE_9_length_172377_cov_28.779995,positive,162891-163322,100.0,93.52,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) C",Poland,,15.0,,
SRR13052807,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13052807_AMRSEG0001,NODE_11_length_173146_cov_30.466227,negative,9686-10117,100.0,93.52,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) B",Poland,,15.0,,
SRR13052807,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13052807_AMRSEG0002,NODE_14_length_160264_cov_30.207658,negative,123574-123918,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) B",Poland,,15.0,,
SRR13052807,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13052807_AMRSEG0003,NODE_18_length_140615_cov_29.334552,negative,131814-132500,100.0,84.13,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) B",Poland,,15.0,,
SRR13052807,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13052807_AMRSEG0004,NODE_1_length_291008_cov_29.183052,positive,52129-53643,100.0,99.87,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) B",Poland,,15.0,,
SRR13052807,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13052807_AMRSEG0005,NODE_27_length_108504_cov_27.690698,negative,36158-37318,100.0,99.91,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) B",Poland,,15.0,,
SRR13052807,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13052807_AMRSEG0006,NODE_30_length_93967_cov_32.337270,negative,3868-4500,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) B",Poland,,15.0,,
SRR13052807,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13052807_AMRSEG0007,NODE_51_length_47757_cov_30.212081,negative,39763-43248,98.94,81.06,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) B",Poland,,15.0,,
SRR13052807,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13052807_AMRSEG0008,NODE_9_length_175577_cov_29.707072,negative,168854-170113,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) B",Poland,,15.0,,
SRR13052808,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13052808_AMRSEG0001,NODE_11_length_173007_cov_29.381210,positive,162891-163322,100.0,93.52,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) A",Poland,,15.0,,
SRR13052808,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13052808_AMRSEG0002,NODE_19_length_140615_cov_28.249296,negative,131814-132500,100.0,84.13,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) A",Poland,,15.0,,
SRR13052808,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13052808_AMRSEG0003,NODE_1_length_291452_cov_28.469451,positive,52129-53643,100.0,99.87,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) A",Poland,,15.0,,
SRR13052808,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13052808_AMRSEG0004,NODE_22_length_133808_cov_27.505088,negative,61462-62622,100.0,99.91,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) A",Poland,,15.0,,
SRR13052808,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13052808_AMRSEG0005,NODE_27_length_100948_cov_28.689528,negative,39763-43248,98.94,81.06,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) A",Poland,,15.0,,
SRR13052808,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13052808_AMRSEG0006,NODE_29_length_93967_cov_31.634925,positive,89468-90100,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) A",Poland,,15.0,,
SRR13052808,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13052808_AMRSEG0007,NODE_5_length_228102_cov_28.032885,negative,123574-123918,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) A",Poland,,15.0,,
SRR13052808,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13052808_AMRSEG0008,NODE_9_length_175577_cov_28.943651,negative,168854-170113,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis MC2 155: knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) A",Poland,,15.0,,
SRR13052821,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13052821_AMRSEG0001,NODE_15_length_140615_cov_193.176632,negative,131814-132500,100.0,84.13,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) mix",Poland,,15.0,,
SRR13052821,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13052821_AMRSEG0002,NODE_19_length_133808_cov_192.627732,negative,61462-62622,100.0,99.91,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) mix",Poland,,15.0,,
SRR13052821,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13052821_AMRSEG0003,NODE_26_length_101473_cov_218.792762,positive,52128-53642,100.0,99.87,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) mix",Poland,,15.0,,
SRR13052821,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13052821_AMRSEG0004,NODE_27_length_100948_cov_199.269435,negative,39763-43248,98.94,81.06,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) mix",Poland,,15.0,,
SRR13052821,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13052821_AMRSEG0005,NODE_29_length_93967_cov_237.218383,positive,89468-90100,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) mix",Poland,,15.0,,
SRR13052821,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13052821_AMRSEG0006,NODE_4_length_187849_cov_171.589911,positive,104083-104427,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) mix",Poland,,15.0,,
SRR13052821,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13052821_AMRSEG0007,NODE_7_length_175577_cov_194.641447,negative,168854-170113,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) mix",Poland,,15.0,,
SRR13052821,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13052821_AMRSEG0008,NODE_9_length_173007_cov_202.980907,negative,9686-10117,100.0,93.52,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) mix",Poland,,15.0,,
SRR13052822,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13052822_AMRSEG0001,NODE_11_length_173007_cov_208.081379,positive,162891-163322,100.0,93.52,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155  knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) mix",Poland,,15.0,,
SRR13052822,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13052822_AMRSEG0002,NODE_15_length_159490_cov_167.431709,positive,55702-56046,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155  knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) mix",Poland,,15.0,,
SRR13052822,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13052822_AMRSEG0003,NODE_19_length_140615_cov_191.768029,negative,131814-132500,100.0,84.13,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155  knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) mix",Poland,,15.0,,
SRR13052822,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13052822_AMRSEG0004,NODE_23_length_133808_cov_185.981016,negative,61462-62622,100.0,99.91,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155  knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) mix",Poland,,15.0,,
SRR13052822,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13052822_AMRSEG0005,NODE_28_length_101466_cov_216.624715,negative,47823-49337,100.0,99.87,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155  knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) mix",Poland,,15.0,,
SRR13052822,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13052822_AMRSEG0006,NODE_29_length_100948_cov_196.657372,negative,39763-43248,98.94,81.06,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155  knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) mix",Poland,,15.0,,
SRR13052822,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13052822_AMRSEG0007,NODE_32_length_93967_cov_254.329294,negative,3868-4500,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155  knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) mix",Poland,,15.0,,
SRR13052822,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13052822_AMRSEG0008,NODE_9_length_175577_cov_193.831045,positive,5465-6724,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155  knock-out mutant MSMEG_5580 (Ku), MSMEG_5570 (LigD), MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301 (Prm2) mix",Poland,,15.0,,
SRR13052823,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13052823_AMRSEG0001,NODE_11_length_173007_cov_407.732491,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis mc2 155 mix,Poland,,15.0,,
SRR13052823,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13052823_AMRSEG0002,NODE_14_length_163284_cov_381.112804,negative,156561-157820,100.0,100.0,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis mc2 155 mix,Poland,,15.0,,
SRR13052823,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13052823_AMRSEG0003,NODE_15_length_159789_cov_338.524235,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis mc2 155 mix,Poland,,15.0,,
SRR13052823,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13052823_AMRSEG0004,NODE_18_length_140615_cov_379.871122,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis mc2 155 mix,Poland,,15.0,,
SRR13052823,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13052823_AMRSEG0005,NODE_22_length_133808_cov_374.489237,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis mc2 155 mix,Poland,,15.0,,
SRR13052823,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13052823_AMRSEG0006,NODE_28_length_100948_cov_400.713545,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis mc2 155 mix,Poland,,15.0,,
SRR13052823,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13052823_AMRSEG0007,NODE_31_length_93967_cov_475.243823,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis mc2 155 mix,Poland,,15.0,,
SRR13052823,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13052823_AMRSEG0008,NODE_5_length_232078_cov_433.451117,negative,178435-179949,100.0,99.87,Lab,Lab,Lab:WGS of Mycolicibacterium smegmatis mc2 155 mix,Poland,,15.0,,
SRR13052831,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13052831_AMRSEG0001,NODE_11_length_172377_cov_31.123223,negative,9056-9487,100.0,93.52,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) C",Poland,,15.0,,
SRR13052831,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13052831_AMRSEG0002,NODE_14_length_140615_cov_30.128750,negative,131814-132500,100.0,84.13,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) C",Poland,,15.0,,
SRR13052831,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13052831_AMRSEG0003,NODE_1_length_265917_cov_36.726617,positive,53692-55206,100.0,99.87,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) C",Poland,,15.0,,
SRR13052831,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13052831_AMRSEG0004,NODE_23_length_108507_cov_28.533206,negative,36161-37321,100.0,99.91,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) C",Poland,,15.0,,
SRR13052831,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13052831_AMRSEG0005,NODE_29_length_93967_cov_33.965497,negative,3868-4500,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) C",Poland,,15.0,,
SRR13052831,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13052831_AMRSEG0006,NODE_54_length_47883_cov_31.392681,negative,39763-43248,98.94,81.06,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) C",Poland,,15.0,,
SRR13052831,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13052831_AMRSEG0007,NODE_8_length_175813_cov_28.019340,positive,92048-92392,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) C",Poland,,15.0,,
SRR13052831,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13052831_AMRSEG0008,NODE_9_length_175577_cov_30.353020,negative,168854-170113,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) C",Poland,,15.0,,
SRR13052832,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13052832_AMRSEG0001,NODE_10_length_173132_cov_34.931143,negative,9686-10117,100.0,93.52,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) B",Poland,,15.0,,
SRR13052832,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13052832_AMRSEG0002,NODE_15_length_140615_cov_33.867039,negative,131814-132500,100.0,84.13,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) B",Poland,,15.0,,
SRR13052832,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13052832_AMRSEG0003,NODE_19_length_133808_cov_32.514763,negative,61462-62622,100.0,99.91,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) B",Poland,,15.0,,
SRR13052832,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13052832_AMRSEG0004,NODE_1_length_290186_cov_32.899953,negative,236544-238058,100.0,99.87,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) B",Poland,,15.0,,
SRR13052832,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13052832_AMRSEG0005,NODE_26_length_100948_cov_34.111355,negative,39763-43248,98.94,81.06,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) B",Poland,,15.0,,
SRR13052832,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13052832_AMRSEG0006,NODE_29_length_93967_cov_37.499020,positive,89468-90100,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) B",Poland,,15.0,,
SRR13052832,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13052832_AMRSEG0007,NODE_5_length_188049_cov_31.468492,positive,104183-104527,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) B",Poland,,15.0,,
SRR13052832,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13052832_AMRSEG0008,NODE_9_length_174924_cov_33.263409,negative,168949-170208,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) B",Poland,,15.0,,
SRR13052833,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13052833_AMRSEG0001,NODE_11_length_140615_cov_32.268797,positive,8116-8802,100.0,84.13,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) A",Poland,,15.0,,
SRR13052833,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13052833_AMRSEG0002,NODE_15_length_133808_cov_31.382855,negative,61462-62622,100.0,99.91,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) A",Poland,,15.0,,
SRR13052833,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13052833_AMRSEG0003,NODE_1_length_290092_cov_31.950895,negative,236450-237964,100.0,99.87,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) A",Poland,,15.0,,
SRR13052833,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13052833_AMRSEG0004,NODE_20_length_120162_cov_30.518114,negative,83534-83878,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) A",Poland,,15.0,,
SRR13052833,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13052833_AMRSEG0005,NODE_29_length_93967_cov_36.908066,positive,89468-90100,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) A",Poland,,15.0,,
SRR13052833,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13052833_AMRSEG0006,NODE_54_length_47893_cov_33.298829,negative,39765-43250,98.94,81.06,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) A",Poland,,15.0,,
SRR13052833,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13052833_AMRSEG0007,NODE_5_length_173009_cov_33.423560,positive,162893-163324,100.0,93.52,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) A",Poland,,15.0,,
SRR13052833,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13052833_AMRSEG0008,NODE_7_length_156365_cov_31.293112,negative,150408-151667,100.0,100.0,Lab,Lab,"Lab:WGS of Mycolicibacterium smegmatis mc2 155 knock-out mutant MSMEG_6302 (LigC1), MSMEG_6304 (LigC2) and MSMEG_6301(Prim2) A",Poland,,15.0,,
SRR13767929,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13767929_AMRSEG0001,NODE_13_length_175577_cov_306.864415,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767929,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13767929_AMRSEG0002,NODE_15_length_173007_cov_311.693554,positive,162891-163322,100.0,93.52,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767929,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13767929_AMRSEG0003,NODE_1_length_292151_cov_328.559277,negative,238509-240023,100.0,99.87,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767929,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13767929_AMRSEG0004,NODE_20_length_140615_cov_282.754923,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767929,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13767929_AMRSEG0005,NODE_23_length_133965_cov_291.751400,positive,71344-72504,100.0,99.91,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767929,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13767929_AMRSEG0006,NODE_28_length_100948_cov_302.925797,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767929,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13767929_AMRSEG0007,NODE_30_length_93967_cov_338.518072,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767929,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13767929_AMRSEG0008,NODE_6_length_208096_cov_249.133402,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767929,smegmatis,1772,APH(3')-Ia,ARO:3002641,antibiotic inactivation,Serratia marcescens,aminoglycoside antibiotic,"APH(3')-Ia is a transposon-encoded aminoglycoside phosphotransferase in E. coli and S. enterica. It is identical at the protein sequence to APH(3')-Ic, an aminoglycoside phosphotransferase encoded by plasmids, transposons and genomic islands in K. pneumoniae, A. baumannii, S. marcescens, Corynebacterium spp., Photobacterium spp. and Citrobacter spp.",SRR13767929_AMRSEG0009,NODE_77_length_2661_cov_219.187067,negative,90-897,99.02,98.03,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767930,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13767930_AMRSEG0001,NODE_12_length_175577_cov_308.608897,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767930,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13767930_AMRSEG0002,NODE_14_length_173007_cov_316.317762,positive,162891-163322,100.0,93.52,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767930,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13767930_AMRSEG0003,NODE_19_length_140615_cov_288.901709,positive,8116-8802,100.0,84.13,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767930,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13767930_AMRSEG0004,NODE_1_length_261944_cov_347.786090,positive,52129-53643,100.0,99.87,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767930,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13767930_AMRSEG0005,NODE_24_length_133940_cov_295.088761,positive,71319-72479,100.0,99.91,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767930,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13767930_AMRSEG0006,NODE_29_length_100948_cov_303.481994,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767930,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13767930_AMRSEG0007,NODE_32_length_93967_cov_361.626225,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767930,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13767930_AMRSEG0008,NODE_5_length_208096_cov_256.614710,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767930,smegmatis,1772,APH(3')-Ia,ARO:3002641,antibiotic inactivation,Serratia marcescens,aminoglycoside antibiotic,"APH(3')-Ia is a transposon-encoded aminoglycoside phosphotransferase in E. coli and S. enterica. It is identical at the protein sequence to APH(3')-Ic, an aminoglycoside phosphotransferase encoded by plasmids, transposons and genomic islands in K. pneumoniae, A. baumannii, S. marcescens, Corynebacterium spp., Photobacterium spp. and Citrobacter spp.",SRR13767930_AMRSEG0009,NODE_77_length_3891_cov_6944.178683,negative,669-1476,99.02,98.03,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767931,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13767931_AMRSEG0001,NODE_12_length_175577_cov_344.298831,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767931,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13767931_AMRSEG0002,NODE_14_length_173007_cov_349.121664,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767931,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13767931_AMRSEG0003,NODE_19_length_140615_cov_317.153232,positive,8116-8802,100.0,84.13,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767931,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13767931_AMRSEG0004,NODE_1_length_292138_cov_359.351389,negative,238496-240010,100.0,99.87,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767931,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13767931_AMRSEG0005,NODE_23_length_133808_cov_325.026192,positive,71187-72347,100.0,99.91,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767931,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13767931_AMRSEG0006,NODE_29_length_100948_cov_336.481410,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767931,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13767931_AMRSEG0007,NODE_31_length_93967_cov_368.579432,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767931,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13767931_AMRSEG0008,NODE_5_length_208096_cov_265.202208,positive,104083-104427,100.0,100.0,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767932,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13767932_AMRSEG0001,NODE_13_length_175577_cov_279.870546,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767932,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13767932_AMRSEG0002,NODE_15_length_173007_cov_288.023869,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767932,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13767932_AMRSEG0003,NODE_1_length_292146_cov_305.582554,negative,238504-240018,100.0,99.87,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767932,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13767932_AMRSEG0004,NODE_20_length_140615_cov_255.423907,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767932,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13767932_AMRSEG0005,NODE_23_length_133808_cov_265.929261,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767932,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13767932_AMRSEG0006,NODE_28_length_100948_cov_277.995629,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767932,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13767932_AMRSEG0007,NODE_31_length_93967_cov_315.672825,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767932,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13767932_AMRSEG0008,NODE_5_length_208096_cov_210.995631,positive,104083-104427,100.0,100.0,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767933,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR13767933_AMRSEG0001,NODE_12_length_175577_cov_279.042150,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767933,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR13767933_AMRSEG0002,NODE_14_length_173007_cov_278.416378,positive,162891-163322,100.0,93.52,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767933,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR13767933_AMRSEG0003,NODE_19_length_140615_cov_258.538370,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767933,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR13767933_AMRSEG0004,NODE_1_length_291971_cov_291.367434,negative,238329-239843,100.0,99.87,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767933,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR13767933_AMRSEG0005,NODE_22_length_133964_cov_264.440288,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767933,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR13767933_AMRSEG0006,NODE_28_length_100948_cov_272.407702,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767933,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR13767933_AMRSEG0007,NODE_30_length_93967_cov_298.525196,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR13767933,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR13767933_AMRSEG0008,NODE_5_length_208096_cov_216.192412,positive,104083-104427,100.0,100.0,Lab,Lab,Lab:7H9 medium,China,2020/12/17,15.0,,
SRR16263436,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR16263436_AMRSEG0001,NODE_13_length_122558_cov_473.005217,negative,105067-105411,100.0,99.71,,,,Germany,,134.0,,
SRR16263436,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR16263436_AMRSEG0002,NODE_18_length_111065_cov_472.292535,positive,7031-7717,100.0,84.28,,,,Germany,,134.0,,
SRR16263436,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR16263436_AMRSEG0003,NODE_23_length_94890_cov_470.064222,negative,61063-62223,100.0,100.0,,,,Germany,,134.0,,
SRR16263436,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR16263436_AMRSEG0004,NODE_3_length_308436_cov_645.127797,positive,183710-184342,100.0,99.21,,,,Germany,,134.0,,
SRR16263436,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR16263436_AMRSEG0005,NODE_42_length_57900_cov_504.819908,positive,26014-27273,100.0,99.84,,,,Germany,,134.0,,
SRR16263436,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR16263436_AMRSEG0006,NODE_45_length_57584_cov_626.439752,negative,26684-27115,100.0,100.0,,,,Germany,,134.0,,
SRR16263436,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR16263436_AMRSEG0007,NODE_4_length_186975_cov_536.077673,negative,142190-145675,98.94,81.03,,,,Germany,,134.0,,
SRR16263436,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR16263436_AMRSEG0008,NODE_55_length_35764_cov_508.452704,positive,31982-33496,100.0,99.41,,,,Germany,,134.0,,
SRR16873067,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR16873067_AMRSEG0001,NODE_12_length_182590_cov_163.471678,negative,19267-19698,100.0,93.52,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2013/1/1,15.0,,
SRR16873067,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR16873067_AMRSEG0002,NODE_15_length_174825_cov_163.814159,positive,4713-5972,100.0,100.0,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2013/1/1,15.0,,
SRR16873067,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR16873067_AMRSEG0003,NODE_20_length_140869_cov_163.371547,positive,8370-9056,100.0,84.13,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2013/1/1,15.0,,
SRR16873067,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR16873067_AMRSEG0004,NODE_23_length_133808_cov_163.414931,negative,61462-62622,100.0,99.91,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2013/1/1,15.0,,
SRR16873067,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR16873067_AMRSEG0005,NODE_25_length_119320_cov_162.616282,positive,114821-115453,100.0,100.0,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2013/1/1,15.0,,
SRR16873067,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR16873067_AMRSEG0006,NODE_29_length_100969_cov_162.123858,negative,39763-43248,98.94,81.06,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2013/1/1,15.0,,
SRR16873067,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR16873067_AMRSEG0007,NODE_2_length_291739_cov_161.950730,negative,238097-239611,100.0,99.87,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2013/1/1,15.0,,
SRR16873067,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR16873067_AMRSEG0008,NODE_6_length_208096_cov_164.274082,positive,104083-104427,100.0,100.0,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2013/1/1,15.0,,
SRR16873068,smegmatis,1772,APH(3')-Ia,ARO:3002641,antibiotic inactivation,Serratia marcescens,aminoglycoside antibiotic,"APH(3')-Ia is a transposon-encoded aminoglycoside phosphotransferase in E. coli and S. enterica. It is identical at the protein sequence to APH(3')-Ic, an aminoglycoside phosphotransferase encoded by plasmids, transposons and genomic islands in K. pneumoniae, A. baumannii, S. marcescens, Corynebacterium spp., Photobacterium spp. and Citrobacter spp.",SRR16873068_AMRSEG0001,NODE_105_length_684_cov_1.816425,positive,1-684,83.82,98.98,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2017/1/1,15.0,,
SRR16873068,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR16873068_AMRSEG0002,NODE_12_length_182590_cov_109.300723,positive,162893-163324,100.0,93.52,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2017/1/1,15.0,,
SRR16873068,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR16873068_AMRSEG0003,NODE_15_length_174825_cov_112.227635,negative,168854-170113,100.0,100.0,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2017/1/1,15.0,,
SRR16873068,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR16873068_AMRSEG0004,NODE_20_length_141019_cov_111.714521,positive,8520-9206,100.0,84.13,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2017/1/1,15.0,,
SRR16873068,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR16873068_AMRSEG0005,NODE_23_length_133808_cov_111.423261,positive,71187-72347,100.0,99.91,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2017/1/1,15.0,,
SRR16873068,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR16873068_AMRSEG0006,NODE_26_length_119320_cov_109.124236,negative,3868-4500,100.0,100.0,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2017/1/1,15.0,,
SRR16873068,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR16873068_AMRSEG0007,NODE_29_length_100969_cov_108.889184,negative,39763-43248,98.94,81.06,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2017/1/1,15.0,,
SRR16873068,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR16873068_AMRSEG0008,NODE_2_length_292046_cov_110.613601,negative,238404-239918,100.0,99.87,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2017/1/1,15.0,,
SRR16873068,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR16873068_AMRSEG0009,NODE_6_length_208096_cov_112.428278,positive,104083-104427,100.0,100.0,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2017/1/1,15.0,,
SRR16873069,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR16873069_AMRSEG0001,NODE_12_length_182590_cov_118.508823,positive,162893-163324,100.0,93.52,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2016/1/1,15.0,,
SRR16873069,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR16873069_AMRSEG0002,NODE_16_length_174695_cov_118.286540,negative,168724-169983,100.0,100.0,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2016/1/1,15.0,,
SRR16873069,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR16873069_AMRSEG0003,NODE_20_length_141019_cov_119.815510,positive,8520-9206,100.0,84.13,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2016/1/1,15.0,,
SRR16873069,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR16873069_AMRSEG0004,NODE_23_length_133808_cov_117.417720,positive,71187-72347,100.0,99.91,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2016/1/1,15.0,,
SRR16873069,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR16873069_AMRSEG0005,NODE_26_length_119320_cov_118.749323,positive,114821-115453,100.0,100.0,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2016/1/1,15.0,,
SRR16873069,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR16873069_AMRSEG0006,NODE_29_length_100969_cov_119.476285,negative,39763-43248,98.94,81.06,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2016/1/1,15.0,,
SRR16873069,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR16873069_AMRSEG0007,NODE_2_length_292394_cov_120.715278,positive,52128-53642,100.0,99.87,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2016/1/1,15.0,,
SRR16873069,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR16873069_AMRSEG0008,NODE_6_length_208096_cov_118.252085,negative,103670-104014,100.0,100.0,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2016/1/1,15.0,,
SRR16873070,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR16873070_AMRSEG0001,NODE_11_length_182590_cov_135.165345,negative,19267-19698,100.0,93.52,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2015/1/1,15.0,,
SRR16873070,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR16873070_AMRSEG0002,NODE_15_length_174695_cov_136.158671,negative,168724-169983,100.0,100.0,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2015/1/1,15.0,,
SRR16873070,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR16873070_AMRSEG0003,NODE_20_length_141019_cov_134.821292,positive,8520-9206,100.0,84.13,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2015/1/1,15.0,,
SRR16873070,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR16873070_AMRSEG0004,NODE_23_length_133808_cov_135.098082,negative,61462-62622,100.0,99.91,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2015/1/1,15.0,,
SRR16873070,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR16873070_AMRSEG0005,NODE_26_length_119320_cov_134.362134,negative,3868-4500,100.0,100.0,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2015/1/1,15.0,,
SRR16873070,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR16873070_AMRSEG0006,NODE_29_length_100969_cov_135.756615,negative,39763-43248,98.94,81.06,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2015/1/1,15.0,,
SRR16873070,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR16873070_AMRSEG0007,NODE_2_length_292394_cov_138.529544,positive,52128-53642,100.0,99.87,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2015/1/1,15.0,,
SRR16873070,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR16873070_AMRSEG0008,NODE_6_length_208096_cov_134.614239,negative,103670-104014,100.0,100.0,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2015/1/1,15.0,,
SRR16873071,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR16873071_AMRSEG0001,NODE_12_length_182590_cov_100.447342,positive,162893-163324,100.0,93.52,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2016/1/1,15.0,,
SRR16873071,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR16873071_AMRSEG0002,NODE_16_length_174695_cov_100.516234,positive,4713-5972,100.0,100.0,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2016/1/1,15.0,,
SRR16873071,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR16873071_AMRSEG0003,NODE_20_length_141019_cov_101.757215,positive,8520-9206,100.0,84.13,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2016/1/1,15.0,,
SRR16873071,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR16873071_AMRSEG0004,NODE_23_length_133808_cov_101.180635,positive,71187-72347,100.0,99.91,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2016/1/1,15.0,,
SRR16873071,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR16873071_AMRSEG0005,NODE_25_length_119320_cov_100.964530,positive,114821-115453,100.0,100.0,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2016/1/1,15.0,,
SRR16873071,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR16873071_AMRSEG0006,NODE_29_length_100969_cov_101.128734,negative,39763-43248,98.94,81.06,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2016/1/1,15.0,,
SRR16873071,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR16873071_AMRSEG0007,NODE_2_length_292394_cov_103.713951,positive,52128-53642,100.0,99.87,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2016/1/1,15.0,,
SRR16873071,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR16873071_AMRSEG0008,NODE_6_length_208096_cov_99.968173,positive,104083-104427,100.0,100.0,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2016/1/1,15.0,,
SRR16873072,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR16873072_AMRSEG0001,NODE_12_length_182590_cov_103.632947,positive,162893-163324,100.0,93.52,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2015/1/1,15.0,,
SRR16873072,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR16873072_AMRSEG0002,NODE_16_length_174695_cov_104.205008,positive,4713-5972,100.0,100.0,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2015/1/1,15.0,,
SRR16873072,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR16873072_AMRSEG0003,NODE_22_length_133808_cov_102.805129,positive,71187-72347,100.0,99.91,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2015/1/1,15.0,,
SRR16873072,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR16873072_AMRSEG0004,NODE_25_length_119320_cov_102.942284,negative,3868-4500,100.0,100.0,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2015/1/1,15.0,,
SRR16873072,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR16873072_AMRSEG0005,NODE_28_length_100969_cov_103.050978,positive,57722-61207,98.94,81.06,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2015/1/1,15.0,,
SRR16873072,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR16873072_AMRSEG0006,NODE_2_length_291739_cov_103.075796,negative,238097-239611,100.0,99.87,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2015/1/1,15.0,,
SRR16873072,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR16873072_AMRSEG0007,NODE_44_length_55631_cov_104.799147,positive,8370-9056,100.0,84.13,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2015/1/1,15.0,,
SRR16873072,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR16873072_AMRSEG0008,NODE_6_length_208097_cov_103.418633,positive,104083-104427,100.0,100.0,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2015/1/1,15.0,,
SRR16955307,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR16955307_AMRSEG0001,NODE_14_length_133484_cov_38.384497,positive,59456-60715,100.0,99.84,,,,United Kingdom,2017/1/1,134.0,,
SRR16955307,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR16955307_AMRSEG0002,NODE_22_length_98072_cov_42.629565,positive,65961-67475,100.0,99.41,,,,United Kingdom,2017/1/1,134.0,,
SRR18540350,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR18540350_AMRSEG0001,NODE_12_length_175577_cov_152.741212,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540350,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR18540350_AMRSEG0002,NODE_14_length_172377_cov_152.875564,positive,162891-163322,100.0,93.52,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540350,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR18540350_AMRSEG0003,NODE_19_length_140615_cov_145.214575,positive,8116-8802,100.0,84.13,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540350,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR18540350_AMRSEG0004,NODE_22_length_133808_cov_146.076242,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540350,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR18540350_AMRSEG0005,NODE_28_length_100954_cov_152.482293,positive,57701-61186,98.94,81.06,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540350,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR18540350_AMRSEG0006,NODE_2_length_266226_cov_159.485064,positive,52128-53642,100.0,99.87,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540350,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR18540350_AMRSEG0007,NODE_30_length_93967_cov_159.792575,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540350,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR18540350_AMRSEG0008,NODE_6_length_208096_cov_135.259271,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540351,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR18540351_AMRSEG0001,NODE_11_length_175577_cov_191.236676,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540351,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR18540351_AMRSEG0002,NODE_12_length_172378_cov_191.156417,positive,162892-163323,100.0,93.52,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540351,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR18540351_AMRSEG0003,NODE_13_length_171572_cov_200.742783,positive,52128-53642,100.0,99.87,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540351,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR18540351_AMRSEG0004,NODE_17_length_133808_cov_183.255606,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540351,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR18540351_AMRSEG0005,NODE_24_length_100954_cov_190.187083,positive,57701-61186,98.94,81.06,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540351,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR18540351_AMRSEG0006,NODE_26_length_93967_cov_199.683954,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540351,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR18540351_AMRSEG0007,NODE_44_length_57844_cov_179.179107,positive,8116-8802,100.0,84.13,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540351,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR18540351_AMRSEG0008,NODE_4_length_208096_cov_163.027169,positive,104083-104427,100.0,100.0,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540352,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR18540352_AMRSEG0001,NODE_11_length_172377_cov_148.854034,negative,9056-9487,100.0,93.52,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540352,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR18540352_AMRSEG0002,NODE_16_length_140615_cov_141.059828,positive,8116-8802,100.0,84.13,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540352,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR18540352_AMRSEG0003,NODE_19_length_133808_cov_144.829833,positive,71187-72347,100.0,99.91,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540352,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR18540352_AMRSEG0004,NODE_1_length_292964_cov_169.706000,positive,52128-53642,100.0,99.87,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540352,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR18540352_AMRSEG0005,NODE_27_length_100949_cov_146.734998,negative,39764-43249,98.94,81.06,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540352,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR18540352_AMRSEG0006,NODE_30_length_93967_cov_152.856194,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540352,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR18540352_AMRSEG0007,NODE_44_length_57089_cov_145.336987,negative,51118-52377,100.0,100.0,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540352,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR18540352_AMRSEG0008,NODE_4_length_208096_cov_131.328390,positive,104083-104427,100.0,100.0,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540353,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR18540353_AMRSEG0001,NODE_15_length_133808_cov_61.309312,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540353,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR18540353_AMRSEG0002,NODE_24_length_100948_cov_61.917609,positive,57701-61186,98.94,81.06,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540353,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR18540353_AMRSEG0003,NODE_28_length_93967_cov_60.634627,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540353,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR18540353_AMRSEG0004,NODE_42_length_69577_cov_67.422735,negative,62854-64113,100.0,100.0,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540353,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR18540353_AMRSEG0005,NODE_48_length_57865_cov_61.073752,positive,8116-8802,100.0,84.13,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540353,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR18540353_AMRSEG0006,NODE_4_length_213927_cov_62.050322,negative,160285-161799,100.0,99.87,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540353,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR18540353_AMRSEG0007,NODE_5_length_208096_cov_59.691746,positive,104083-104427,100.0,100.0,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR18540353,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR18540353_AMRSEG0008,NODE_9_length_173007_cov_61.579604,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:7H10 plate,India,2019/6/19,15.0,,
SRR3467757,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467757_AMRSEG0006,NODE_28_length_100948_cov_54.512762,positive,57701-61186,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467757,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467757_AMRSEG0007,NODE_31_length_93967_cov_59.912975,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467757,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467757_AMRSEG0008,NODE_5_length_208096_cov_46.946268,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467758,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467758_AMRSEG0001,NODE_10_length_174825_cov_46.399795,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467758,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467758_AMRSEG0002,NODE_11_length_173012_cov_48.299834,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467758,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467758_AMRSEG0003,NODE_15_length_147958_cov_43.375591,negative,43532-43876,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467758,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467758_AMRSEG0004,NODE_19_length_133808_cov_45.661124,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467758,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467758_AMRSEG0005,NODE_1_length_292399_cov_50.693784,negative,238757-240271,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467758,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467758_AMRSEG0006,NODE_25_length_100948_cov_48.374912,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467758,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467758_AMRSEG0007,NODE_28_length_96282_cov_44.717925,negative,87355-88041,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467758,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467758_AMRSEG0008,NODE_29_length_93967_cov_53.222898,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467759,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467759_AMRSEG0001,NODE_12_length_173007_cov_39.298704,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467759,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467759_AMRSEG0002,NODE_16_length_149387_cov_37.971867,negative,142664-143923,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467759,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467759_AMRSEG0003,NODE_17_length_140615_cov_36.739883,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467759,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467759_AMRSEG0004,NODE_1_length_292321_cov_41.753560,positive,52128-53642,100.0,99.8,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467759,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467759_AMRSEG0005,NODE_20_length_129431_cov_36.809304,negative,57085-58245,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467759,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467759_AMRSEG0006,NODE_25_length_100948_cov_39.006949,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467759,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467759_AMRSEG0007,NODE_30_length_93967_cov_43.400973,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467759,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467759_AMRSEG0008,NODE_5_length_208096_cov_33.952517,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467760,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467760_AMRSEG0001,NODE_12_length_175577_cov_65.532242,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467760,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467760_AMRSEG0002,NODE_17_length_140840_cov_63.197760,positive,8341-9027,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467760,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467760_AMRSEG0003,NODE_1_length_292322_cov_67.605867,positive,52129-53643,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467760,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467760_AMRSEG0004,NODE_20_length_133808_cov_61.896176,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467760,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467760_AMRSEG0005,NODE_28_length_100948_cov_65.720355,positive,57701-61186,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467760,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467760_AMRSEG0006,NODE_31_length_93967_cov_71.683837,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467760,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467760_AMRSEG0007,NODE_48_length_43352_cov_66.356326,positive,33236-33667,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467760,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467760_AMRSEG0008,NODE_5_length_208096_cov_59.870078,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467761,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467761_AMRSEG0001,NODE_11_length_175577_cov_71.574957,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467761,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467761_AMRSEG0002,NODE_12_length_173008_cov_72.876429,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467761,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467761_AMRSEG0003,NODE_18_length_140615_cov_67.551718,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467761,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467761_AMRSEG0004,NODE_1_length_291971_cov_76.090933,negative,238329-239843,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467761,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467761_AMRSEG0005,NODE_21_length_133808_cov_66.938921,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467761,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467761_AMRSEG0006,NODE_26_length_100949_cov_72.650645,positive,57702-61187,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467761,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467761_AMRSEG0007,NODE_29_length_93967_cov_83.941121,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467761,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467761_AMRSEG0008,NODE_4_length_208096_cov_62.655752,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467762,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467762_AMRSEG0001,NODE_13_length_173994_cov_88.693959,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467762,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467762_AMRSEG0002,NODE_14_length_173007_cov_88.159254,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467762,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467762_AMRSEG0003,NODE_19_length_140615_cov_81.990879,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467762,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467762_AMRSEG0004,NODE_1_length_292322_cov_91.184049,negative,238680-240194,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467762,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467762_AMRSEG0005,NODE_22_length_133808_cov_82.140073,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467762,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467762_AMRSEG0006,NODE_27_length_100948_cov_87.424711,positive,57701-61186,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467762,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467762_AMRSEG0007,NODE_30_length_93968_cov_96.043363,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467762,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467762_AMRSEG0008,NODE_4_length_208096_cov_75.363298,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467763,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467763_AMRSEG0001,NODE_12_length_175577_cov_67.322516,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467763,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467763_AMRSEG0002,NODE_14_length_173007_cov_68.148990,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467763,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467763_AMRSEG0003,NODE_19_length_140615_cov_66.166081,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467763,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467763_AMRSEG0004,NODE_1_length_292323_cov_68.470841,negative,238680-240194,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467763,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467763_AMRSEG0005,NODE_21_length_133808_cov_63.879016,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467763,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467763_AMRSEG0006,NODE_28_length_100948_cov_68.152451,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467763,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467763_AMRSEG0007,NODE_31_length_93967_cov_72.555567,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467763,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467763_AMRSEG0008,NODE_6_length_208096_cov_61.251542,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467764,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467764_AMRSEG0001,NODE_13_length_175577_cov_73.029399,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467764,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467764_AMRSEG0002,NODE_15_length_173009_cov_73.394025,positive,162893-163324,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467764,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467764_AMRSEG0003,NODE_19_length_140615_cov_69.602695,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467764,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467764_AMRSEG0004,NODE_22_length_133808_cov_69.654918,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467764,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467764_AMRSEG0005,NODE_28_length_100948_cov_72.967042,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467764,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467764_AMRSEG0006,NODE_31_length_97707_cov_73.801934,negative,44065-45579,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467764,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467764_AMRSEG0007,NODE_32_length_93967_cov_81.782469,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467764,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467764_AMRSEG0008,NODE_4_length_208096_cov_64.470002,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467765,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467765_AMRSEG0001,NODE_12_length_175577_cov_80.587218,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467765,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467765_AMRSEG0002,NODE_14_length_173007_cov_83.461236,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467765,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467765_AMRSEG0003,NODE_17_length_140615_cov_77.223497,positive,8116-8802,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467765,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467765_AMRSEG0004,NODE_1_length_292322_cov_87.169233,negative,238680-240194,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467765,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467765_AMRSEG0005,NODE_20_length_133809_cov_76.991028,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467765,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467765_AMRSEG0006,NODE_25_length_100948_cov_81.928007,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467765,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467765_AMRSEG0007,NODE_28_length_93967_cov_96.328293,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467765,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467765_AMRSEG0008,NODE_5_length_208096_cov_70.444184,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467766,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467766_AMRSEG0001,NODE_13_length_175578_cov_111.706048,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467766,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467766_AMRSEG0002,NODE_15_length_173006_cov_114.843330,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467766,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467766_AMRSEG0003,NODE_19_length_140614_cov_105.883082,negative,131813-132499,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467766,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467766_AMRSEG0004,NODE_1_length_292340_cov_123.503392,positive,52156-53670,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467766,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467766_AMRSEG0005,NODE_22_length_133808_cov_106.491368,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467766,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467766_AMRSEG0006,NODE_25_length_100948_cov_113.282143,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467766,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467766_AMRSEG0007,NODE_29_length_93967_cov_131.515367,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467766,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467766_AMRSEG0008,NODE_5_length_208096_cov_94.274716,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467767,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467767_AMRSEG0001,NODE_11_length_175577_cov_88.285641,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467767,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467767_AMRSEG0002,NODE_14_length_158576_cov_90.276551,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467767,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467767_AMRSEG0003,NODE_19_length_140615_cov_84.106587,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467767,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467767_AMRSEG0004,NODE_1_length_291978_cov_92.903116,positive,52129-53643,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467767,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467767_AMRSEG0005,NODE_22_length_133808_cov_84.407462,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467767,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467767_AMRSEG0006,NODE_27_length_100948_cov_88.651653,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467767,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467767_AMRSEG0007,NODE_32_length_93967_cov_101.427202,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467767,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467767_AMRSEG0008,NODE_5_length_208096_cov_76.294751,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467768,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467768_AMRSEG0001,NODE_12_length_174825_cov_103.132420,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467768,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467768_AMRSEG0002,NODE_14_length_173008_cov_110.462806,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467768,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467768_AMRSEG0003,NODE_1_length_292322_cov_115.178715,positive,52129-53643,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467768,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467768_AMRSEG0004,NODE_20_length_133808_cov_101.723878,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467768,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467768_AMRSEG0005,NODE_23_length_117442_cov_101.593616,positive,8116-8802,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467768,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467768_AMRSEG0006,NODE_27_length_100948_cov_107.954701,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467768,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467768_AMRSEG0007,NODE_29_length_94063_cov_124.638053,positive,89564-90196,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467768,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467768_AMRSEG0008,NODE_5_length_208096_cov_94.355391,positive,104083-104427,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467769,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467769_AMRSEG0001,NODE_11_length_175577_cov_64.014438,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467769,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467769_AMRSEG0002,NODE_13_length_173007_cov_64.600136,positive,162891-163322,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467769,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467769_AMRSEG0003,NODE_18_length_140615_cov_62.423096,positive,8116-8802,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467769,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467769_AMRSEG0004,NODE_1_length_292594_cov_67.909528,negative,238680-240194,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467769,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467769_AMRSEG0005,NODE_21_length_133808_cov_60.718397,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467769,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467769_AMRSEG0006,NODE_27_length_100948_cov_64.746484,positive,57701-61186,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467769,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467769_AMRSEG0007,NODE_31_length_93967_cov_71.275728,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467769,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467769_AMRSEG0008,NODE_4_length_208096_cov_58.069821,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467770,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467770_AMRSEG0001,NODE_13_length_175447_cov_73.457003,negative,168724-169983,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467770,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467770_AMRSEG0002,NODE_15_length_173007_cov_74.446815,positive,162891-163322,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467770,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467770_AMRSEG0003,NODE_17_length_140615_cov_69.529455,positive,8116-8802,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467770,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467770_AMRSEG0004,NODE_19_length_133808_cov_68.718001,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467770,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467770_AMRSEG0005,NODE_1_length_292415_cov_75.545928,negative,238773-240287,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467770,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467770_AMRSEG0006,NODE_25_length_100948_cov_73.355335,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467770,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467770_AMRSEG0007,NODE_28_length_93967_cov_81.758157,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467770,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467770_AMRSEG0008,NODE_6_length_208096_cov_64.571938,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467771,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467771_AMRSEG0001,NODE_13_length_175619_cov_92.797444,negative,168842-170101,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467771,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467771_AMRSEG0002,NODE_15_length_172995_cov_94.927550,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467771,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467771_AMRSEG0003,NODE_19_length_140616_cov_89.407483,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467771,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467771_AMRSEG0004,NODE_22_length_133808_cov_87.274792,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467771,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467771_AMRSEG0005,NODE_27_length_100948_cov_93.743381,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467771,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467771_AMRSEG0006,NODE_30_length_93967_cov_103.865224,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467771,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467771_AMRSEG0007,NODE_5_length_208096_cov_82.254354,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467771,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467771_AMRSEG0008,NODE_6_length_198989_cov_94.504509,negative,145347-146861,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467772,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467772_AMRSEG0001,NODE_13_length_175577_cov_63.682151,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467772,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467772_AMRSEG0002,NODE_14_length_173011_cov_64.777997,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467772,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467772_AMRSEG0003,NODE_18_length_140785_cov_61.377119,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467772,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467772_AMRSEG0004,NODE_1_length_292322_cov_67.099826,negative,238680-240194,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467772,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467772_AMRSEG0005,NODE_21_length_133808_cov_59.860840,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467772,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467772_AMRSEG0006,NODE_26_length_100948_cov_64.148942,positive,57701-61186,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467772,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467772_AMRSEG0007,NODE_47_length_49335_cov_68.288358,positive,44836-45468,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467772,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467772_AMRSEG0008,NODE_5_length_208096_cov_56.304144,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467773,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467773_AMRSEG0001,NODE_13_length_175965_cov_106.207002,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467773,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467773_AMRSEG0002,NODE_15_length_173007_cov_104.686419,positive,162891-163322,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467773,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467773_AMRSEG0003,NODE_19_length_140615_cov_98.980904,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467773,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467773_AMRSEG0004,NODE_1_length_291971_cov_108.995300,negative,238329-239843,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467773,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467773_AMRSEG0005,NODE_22_length_130829_cov_98.906619,positive,71187-72347,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467773,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467773_AMRSEG0006,NODE_27_length_100948_cov_103.620994,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467773,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467773_AMRSEG0007,NODE_30_length_93967_cov_118.100315,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467773,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467773_AMRSEG0008,NODE_4_length_208096_cov_89.504997,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467774,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467774_AMRSEG0001,NODE_11_length_175577_cov_108.828811,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467774,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467774_AMRSEG0002,NODE_13_length_173006_cov_108.726326,positive,162890-163321,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467774,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467774_AMRSEG0003,NODE_19_length_140615_cov_102.575047,positive,8116-8802,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467774,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467774_AMRSEG0004,NODE_22_length_133808_cov_101.296228,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467774,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467774_AMRSEG0005,NODE_25_length_121500_cov_108.887300,negative,67859-69373,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467774,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467774_AMRSEG0006,NODE_28_length_100948_cov_106.824107,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467774,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467774_AMRSEG0007,NODE_31_length_93967_cov_126.586748,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467774,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467774_AMRSEG0008,NODE_4_length_208096_cov_92.042162,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467775,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467775_AMRSEG0001,NODE_12_length_175576_cov_73.533305,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467775,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467775_AMRSEG0002,NODE_14_length_173007_cov_75.176734,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467775,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467775_AMRSEG0003,NODE_18_length_140615_cov_68.554635,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467775,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467775_AMRSEG0004,NODE_1_length_292322_cov_77.976120,positive,52129-53643,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467775,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467775_AMRSEG0005,NODE_21_length_133808_cov_68.489200,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467775,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467775_AMRSEG0006,NODE_27_length_100948_cov_73.382128,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467775,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467775_AMRSEG0007,NODE_30_length_93967_cov_85.670142,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467775,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467775_AMRSEG0008,NODE_6_length_208096_cov_62.770782,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467776,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467776_AMRSEG0001,NODE_12_length_175577_cov_81.750037,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467776,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467776_AMRSEG0002,NODE_14_length_173007_cov_81.984145,positive,162891-163322,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467776,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467776_AMRSEG0003,NODE_17_length_140468_cov_81.699128,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467776,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467776_AMRSEG0004,NODE_1_length_292322_cov_85.388163,positive,52129-53643,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467776,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467776_AMRSEG0005,NODE_20_length_133808_cov_77.103137,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467776,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467776_AMRSEG0006,NODE_25_length_100948_cov_82.531952,positive,57701-61186,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467776,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467776_AMRSEG0007,NODE_28_length_94069_cov_91.565677,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467776,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467776_AMRSEG0008,NODE_5_length_208096_cov_70.777526,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467777,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467777_AMRSEG0001,NODE_11_length_175577_cov_65.504854,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467777,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467777_AMRSEG0002,NODE_14_length_163269_cov_65.206426,positive,162893-163269,87.27,93.9,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467777,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467777_AMRSEG0003,NODE_17_length_140615_cov_62.445771,positive,8116-8802,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467777,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467777_AMRSEG0004,NODE_1_length_292322_cov_69.206464,positive,52129-53643,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467777,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467777_AMRSEG0005,NODE_20_length_133808_cov_61.828943,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467777,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467777_AMRSEG0006,NODE_26_length_100948_cov_64.899361,positive,57701-61186,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467777,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467777_AMRSEG0007,NODE_28_length_93967_cov_73.806984,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467777,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467777_AMRSEG0008,NODE_3_length_208097_cov_57.969217,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467778,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467778_AMRSEG0001,NODE_12_length_175577_cov_84.497225,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467778,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467778_AMRSEG0002,NODE_14_length_173007_cov_83.357914,positive,162891-163322,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467778,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467778_AMRSEG0003,NODE_19_length_140615_cov_79.377682,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467778,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467778_AMRSEG0004,NODE_1_length_276550_cov_84.320239,positive,52129-53643,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467778,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467778_AMRSEG0005,NODE_22_length_133808_cov_78.875352,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467778,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467778_AMRSEG0006,NODE_27_length_100948_cov_83.451187,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467778,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467778_AMRSEG0007,NODE_30_length_93968_cov_91.456600,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467778,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467778_AMRSEG0008,NODE_5_length_208096_cov_73.558565,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467779,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467779_AMRSEG0001,NODE_12_length_174825_cov_87.546601,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467779,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467779_AMRSEG0002,NODE_14_length_173009_cov_91.839245,positive,162893-163324,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467779,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467779_AMRSEG0003,NODE_19_length_140615_cov_88.865594,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467779,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467779_AMRSEG0004,NODE_1_length_280872_cov_97.826601,positive,40670-42184,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467779,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467779_AMRSEG0005,NODE_22_length_133808_cov_85.021287,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467779,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467779_AMRSEG0006,NODE_28_length_100948_cov_91.218358,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467779,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467779_AMRSEG0007,NODE_31_length_93967_cov_99.688363,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467779,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467779_AMRSEG0008,NODE_5_length_208096_cov_85.209808,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467780,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467780_AMRSEG0001,NODE_10_length_175514_cov_53.974494,negative,168791-170050,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467780,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467780_AMRSEG0002,NODE_12_length_173008_cov_54.176732,positive,162892-163323,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467780,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467780_AMRSEG0003,NODE_22_length_133808_cov_50.267591,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467780,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467780_AMRSEG0004,NODE_26_length_114284_cov_51.735793,positive,7674-8360,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467780,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467780_AMRSEG0005,NODE_28_length_100948_cov_53.580146,positive,57701-61186,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467780,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467780_AMRSEG0006,NODE_31_length_92980_cov_62.358008,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467780,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467780_AMRSEG0007,NODE_35_length_77300_cov_54.868729,negative,23657-25171,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467780,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467780_AMRSEG0008,NODE_4_length_208096_cov_44.786077,positive,104083-104427,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467781,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467781_AMRSEG0001,NODE_13_length_175577_cov_47.194526,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467781,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467781_AMRSEG0002,NODE_19_length_140785_cov_45.598329,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467781,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467781_AMRSEG0003,NODE_1_length_292397_cov_49.604299,positive,52128-53642,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467781,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467781_AMRSEG0004,NODE_22_length_134000_cov_45.146823,negative,61654-62814,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467781,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467781_AMRSEG0005,NODE_28_length_100948_cov_47.601735,positive,57701-61186,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467781,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467781_AMRSEG0006,NODE_31_length_93967_cov_54.372647,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467781,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467781_AMRSEG0007,NODE_41_length_60743_cov_47.631971,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467781,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467781_AMRSEG0008,NODE_4_length_208096_cov_41.797984,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467782,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467782_AMRSEG0001,NODE_12_length_175577_cov_67.125255,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467782,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467782_AMRSEG0002,NODE_13_length_173009_cov_68.209279,positive,162893-163324,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467782,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467782_AMRSEG0003,NODE_17_length_140785_cov_63.677733,positive,8286-8972,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467782,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467782_AMRSEG0004,NODE_19_length_133808_cov_63.446731,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467782,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467782_AMRSEG0005,NODE_1_length_277725_cov_69.172858,negative,224083-225597,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467782,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467782_AMRSEG0006,NODE_25_length_100948_cov_67.592923,positive,57701-61186,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467782,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467782_AMRSEG0007,NODE_28_length_93968_cov_77.050178,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467782,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467782_AMRSEG0008,NODE_6_length_208096_cov_57.873059,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467783,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467783_AMRSEG0001,NODE_13_length_175457_cov_30.497024,negative,168725-169984,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467783,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467783_AMRSEG0002,NODE_14_length_173008_cov_30.252080,positive,162892-163323,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467783,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467783_AMRSEG0003,NODE_19_length_140869_cov_28.539814,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467783,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467783_AMRSEG0004,NODE_1_length_292322_cov_32.593966,negative,238680-240194,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467783,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467783_AMRSEG0005,NODE_26_length_102895_cov_28.928796,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467783,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467783_AMRSEG0006,NODE_27_length_100948_cov_30.145165,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467783,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467783_AMRSEG0007,NODE_42_length_62006_cov_33.789968,positive,57507-58139,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467783,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467783_AMRSEG0008,NODE_4_length_208097_cov_25.322048,positive,104084-104428,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467784,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467784_AMRSEG0001,NODE_11_length_175577_cov_43.672152,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467784,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467784_AMRSEG0002,NODE_13_length_173008_cov_43.102084,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467784,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467784_AMRSEG0003,NODE_16_length_140869_cov_40.690532,positive,8370-9056,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467784,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467784_AMRSEG0004,NODE_1_length_292323_cov_45.880415,negative,238681-240195,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467784,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467784_AMRSEG0005,NODE_20_length_133808_cov_40.428270,positive,71187-72347,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467784,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467784_AMRSEG0006,NODE_25_length_100948_cov_43.182782,positive,57701-61186,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467784,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467784_AMRSEG0007,NODE_28_length_93967_cov_48.760543,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467784,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467784_AMRSEG0008,NODE_6_length_208096_cov_35.890907,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467785,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467785_AMRSEG0001,NODE_13_length_175447_cov_57.958890,negative,168724-169983,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467785,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467785_AMRSEG0002,NODE_14_length_173007_cov_59.137374,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467785,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467785_AMRSEG0003,NODE_19_length_140869_cov_56.068570,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467785,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467785_AMRSEG0004,NODE_1_length_292322_cov_61.702476,positive,52129-53643,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467785,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467785_AMRSEG0005,NODE_21_length_133808_cov_54.917754,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467785,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467785_AMRSEG0006,NODE_28_length_100948_cov_57.588898,positive,57701-61186,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467785,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467785_AMRSEG0007,NODE_31_length_93967_cov_66.372061,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467785,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467785_AMRSEG0008,NODE_6_length_208097_cov_50.242653,positive,104084-104428,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467786,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467786_AMRSEG0001,NODE_13_length_174825_cov_41.597985,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467786,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467786_AMRSEG0002,NODE_15_length_173007_cov_44.127984,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467786,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467786_AMRSEG0003,NODE_19_length_140869_cov_41.414840,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467786,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467786_AMRSEG0004,NODE_22_length_133808_cov_41.377233,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467786,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467786_AMRSEG0005,NODE_27_length_100936_cov_43.414987,positive,57689-61174,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467786,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467786_AMRSEG0006,NODE_30_length_97151_cov_47.040880,positive,52129-53643,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467786,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467786_AMRSEG0007,NODE_31_length_93967_cov_49.165243,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467786,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467786_AMRSEG0008,NODE_5_length_208096_cov_36.578331,positive,104083-104427,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467787,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467787_AMRSEG0001,NODE_13_length_175898_cov_38.400171,positive,5916-7175,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467787,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467787_AMRSEG0002,NODE_15_length_173007_cov_38.401569,positive,162891-163322,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467787,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467787_AMRSEG0003,NODE_19_length_139651_cov_36.280676,positive,7152-7838,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467787,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467787_AMRSEG0004,NODE_1_length_292163_cov_40.465697,negative,238329-239843,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467787,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467787_AMRSEG0005,NODE_22_length_133809_cov_36.100534,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467787,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467787_AMRSEG0006,NODE_28_length_100948_cov_37.577519,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467787,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467787_AMRSEG0007,NODE_31_length_93967_cov_42.820380,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467787,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467787_AMRSEG0008,NODE_5_length_208096_cov_33.746367,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467788,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467788_AMRSEG0001,NODE_13_length_175577_cov_99.213738,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467788,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467788_AMRSEG0002,NODE_18_length_140615_cov_92.458663,positive,8116-8802,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467788,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467788_AMRSEG0003,NODE_1_length_292313_cov_106.531049,negative,238671-240185,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467788,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467788_AMRSEG0004,NODE_21_length_133808_cov_92.832293,positive,71187-72347,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467788,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467788_AMRSEG0005,NODE_25_length_109472_cov_99.341389,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467788,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467788_AMRSEG0006,NODE_27_length_100948_cov_98.161927,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467788,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467788_AMRSEG0007,NODE_30_length_93968_cov_113.944273,positive,89469-90101,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467788,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467788_AMRSEG0008,NODE_5_length_200915_cov_86.383920,negative,96489-96833,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467789,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467789_AMRSEG0001,NODE_11_length_175577_cov_111.962077,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467789,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467789_AMRSEG0002,NODE_13_length_173006_cov_111.286487,positive,162890-163321,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467789,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467789_AMRSEG0003,NODE_17_length_140615_cov_105.510694,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467789,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467789_AMRSEG0004,NODE_1_length_276118_cov_114.920208,negative,222476-223990,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467789,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467789_AMRSEG0005,NODE_23_length_111517_cov_105.189405,negative,39171-40331,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467789,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467789_AMRSEG0006,NODE_26_length_100948_cov_110.530624,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467789,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467789_AMRSEG0007,NODE_29_length_93967_cov_126.820370,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467789,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467789_AMRSEG0008,NODE_5_length_208096_cov_98.029279,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467790,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467790_AMRSEG0001,NODE_12_length_175577_cov_81.897621,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467790,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467790_AMRSEG0002,NODE_16_length_163267_cov_80.777953,positive,162891-163267,87.27,93.9,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467790,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467790_AMRSEG0003,NODE_18_length_140615_cov_78.575068,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467790,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467790_AMRSEG0004,NODE_1_length_292319_cov_85.396615,positive,52129-53643,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467790,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467790_AMRSEG0005,NODE_21_length_133808_cov_76.880758,positive,71187-72347,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467790,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467790_AMRSEG0006,NODE_28_length_93967_cov_89.794492,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467790,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467790_AMRSEG0007,NODE_42_length_57237_cov_80.999983,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467790,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467790_AMRSEG0008,NODE_6_length_208096_cov_72.840977,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467791,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467791_AMRSEG0001,NODE_12_length_174826_cov_115.419883,positive,4713-5972,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467791,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467791_AMRSEG0002,NODE_14_length_173007_cov_123.506817,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467791,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467791_AMRSEG0003,NODE_20_length_140615_cov_114.360308,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467791,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467791_AMRSEG0004,NODE_23_length_133807_cov_114.902560,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467791,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467791_AMRSEG0005,NODE_29_length_100948_cov_121.219002,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467791,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467791_AMRSEG0006,NODE_31_length_93967_cov_140.058230,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467791,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467791_AMRSEG0007,NODE_5_length_208096_cov_101.599463,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467791,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467791_AMRSEG0008,NODE_9_length_180452_cov_125.422188,negative,126810-128324,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467792,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467792_AMRSEG0001,NODE_13_length_175577_cov_141.815758,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467792,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467792_AMRSEG0002,NODE_15_length_173008_cov_141.353199,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467792,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467792_AMRSEG0003,NODE_1_length_292322_cov_154.325872,positive,52129-53643,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467792,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467792_AMRSEG0004,NODE_20_length_140615_cov_129.333357,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467792,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467792_AMRSEG0005,NODE_23_length_133808_cov_127.696564,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467792,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467792_AMRSEG0006,NODE_28_length_100948_cov_134.471130,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467792,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467792_AMRSEG0007,NODE_30_length_93967_cov_164.187276,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467792,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467792_AMRSEG0008,NODE_7_length_190825_cov_126.963237,negative,86399-86743,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467793,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467793_AMRSEG0001,NODE_12_length_174826_cov_87.177566,negative,168855-170114,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467793,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467793_AMRSEG0002,NODE_14_length_173006_cov_93.382930,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467793,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467793_AMRSEG0003,NODE_20_length_140615_cov_85.407586,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467793,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467793_AMRSEG0004,NODE_23_length_133808_cov_83.840615,positive,71187-72347,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467793,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467793_AMRSEG0005,NODE_28_length_100948_cov_90.412143,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467793,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467793_AMRSEG0006,NODE_31_length_96323_cov_92.436547,positive,52129-53643,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467793,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467793_AMRSEG0007,NODE_32_length_93967_cov_108.379430,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467793,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467793_AMRSEG0008,NODE_4_length_208096_cov_76.133450,positive,104083-104427,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467794,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467794_AMRSEG0001,NODE_11_length_174825_cov_64.004263,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467794,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467794_AMRSEG0002,NODE_13_length_173008_cov_67.261592,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467794,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467794_AMRSEG0003,NODE_1_length_292322_cov_70.994987,positive,52129-53643,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467794,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467794_AMRSEG0004,NODE_20_length_140615_cov_63.513582,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467794,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467794_AMRSEG0005,NODE_23_length_133808_cov_62.097649,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467794,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467794_AMRSEG0006,NODE_28_length_100948_cov_66.068930,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467794,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467794_AMRSEG0007,NODE_32_length_93968_cov_75.529003,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467794,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467794_AMRSEG0008,NODE_4_length_208096_cov_57.876404,positive,104083-104427,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467796,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467796_AMRSEG0001,NODE_12_length_175577_cov_108.918206,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467796,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467796_AMRSEG0002,NODE_14_length_173007_cov_111.417389,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467796,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467796_AMRSEG0003,NODE_17_length_140614_cov_104.715185,positive,8116-8802,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467796,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467796_AMRSEG0004,NODE_1_length_292321_cov_116.062749,positive,52128-53642,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467796,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467796_AMRSEG0005,NODE_20_length_133808_cov_103.980964,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467796,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467796_AMRSEG0006,NODE_26_length_100948_cov_109.960985,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467796,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467796_AMRSEG0007,NODE_29_length_93967_cov_126.343468,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467796,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467796_AMRSEG0008,NODE_5_length_208096_cov_96.780814,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467797,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467797_AMRSEG0001,NODE_13_length_175577_cov_85.127289,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467797,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467797_AMRSEG0002,NODE_18_length_138276_cov_82.214922,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467797,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467797_AMRSEG0003,NODE_1_length_292322_cov_87.332188,negative,238680-240194,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467797,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467797_AMRSEG0004,NODE_20_length_133808_cov_80.497544,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467797,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467797_AMRSEG0005,NODE_27_length_100948_cov_85.614918,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467797,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467797_AMRSEG0006,NODE_30_length_93967_cov_92.792000,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467797,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467797_AMRSEG0007,NODE_57_length_28636_cov_88.042768,positive,18520-18951,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467797,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467797_AMRSEG0008,NODE_5_length_208096_cov_77.159840,positive,104083-104427,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467798,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467798_AMRSEG0001,NODE_10_length_175577_cov_34.822766,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467798,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467798_AMRSEG0002,NODE_12_length_173007_cov_35.419812,positive,162891-163322,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467798,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467798_AMRSEG0003,NODE_17_length_140615_cov_33.583393,positive,8116-8802,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467798,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467798_AMRSEG0004,NODE_20_length_133808_cov_32.176231,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467798,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467798_AMRSEG0005,NODE_27_length_100948_cov_34.584576,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467798,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467798_AMRSEG0006,NODE_30_length_93967_cov_40.813458,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467798,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467798_AMRSEG0007,NODE_3_length_240709_cov_36.320375,positive,860-2374,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467798,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467798_AMRSEG0008,NODE_4_length_208096_cov_30.627227,positive,104083-104427,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467799,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467799_AMRSEG0001,NODE_11_length_175447_cov_22.459569,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467799,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467799_AMRSEG0002,NODE_14_length_163268_cov_22.181036,positive,162892-163268,87.27,93.9,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467799,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467799_AMRSEG0003,NODE_16_length_140615_cov_21.411414,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467799,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467799_AMRSEG0004,NODE_18_length_133808_cov_20.810647,positive,71187-72347,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467799,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467799_AMRSEG0005,NODE_1_length_292808_cov_24.381793,positive,52128-53642,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467799,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467799_AMRSEG0006,NODE_27_length_100948_cov_22.218516,positive,57701-61186,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467799,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467799_AMRSEG0007,NODE_30_length_93967_cov_24.843979,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467799,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467799_AMRSEG0008,NODE_4_length_208096_cov_19.610086,positive,104083-104427,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467800,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467800_AMRSEG0001,NODE_11_length_175447_cov_47.385873,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467800,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467800_AMRSEG0002,NODE_13_length_167810_cov_39.715125,negative,63384-63728,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467800,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467800_AMRSEG0003,NODE_15_length_145095_cov_46.554616,negative,1-377,87.27,93.9,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467800,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467800_AMRSEG0004,NODE_16_length_140785_cov_44.658540,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467800,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467800_AMRSEG0005,NODE_19_length_133808_cov_43.934495,positive,71187-72347,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467800,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467800_AMRSEG0006,NODE_1_length_278853_cov_48.004322,negative,225211-226725,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467800,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467800_AMRSEG0007,NODE_24_length_100948_cov_46.587600,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467800,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467800_AMRSEG0008,NODE_29_length_94010_cov_53.413744,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467801,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467801_AMRSEG0001,NODE_12_length_175587_cov_36.027865,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467801,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467801_AMRSEG0002,NODE_15_length_163266_cov_34.906276,positive,162890-163266,87.27,93.9,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467801,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467801_AMRSEG0003,NODE_17_length_140615_cov_33.529185,positive,8116-8802,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467801,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467801_AMRSEG0004,NODE_21_length_133808_cov_33.047404,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467801,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467801_AMRSEG0005,NODE_26_length_100948_cov_35.385151,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467801,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467801_AMRSEG0006,NODE_29_length_93967_cov_39.623935,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467801,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467801_AMRSEG0007,NODE_2_length_265898_cov_37.201414,positive,25696-27210,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467801,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467801_AMRSEG0008,NODE_4_length_208096_cov_32.186908,positive,104083-104427,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467802,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467802_AMRSEG0001,NODE_12_length_175448_cov_66.176458,negative,168725-169984,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467802,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467802_AMRSEG0002,NODE_13_length_173010_cov_66.811162,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467802,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467802_AMRSEG0003,NODE_17_length_140621_cov_60.856131,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467802,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467802_AMRSEG0004,NODE_1_length_292322_cov_71.005557,negative,238680-240194,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467802,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467802_AMRSEG0005,NODE_20_length_133808_cov_61.256309,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467802,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467802_AMRSEG0006,NODE_27_length_100948_cov_65.655221,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467802,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467802_AMRSEG0007,NODE_30_length_94063_cov_75.246085,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467802,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467802_AMRSEG0008,NODE_6_length_208096_cov_55.262728,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467803,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467803_AMRSEG0001,NODE_12_length_175577_cov_71.131995,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467803,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467803_AMRSEG0002,NODE_13_length_173009_cov_70.887583,positive,162893-163324,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467803,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467803_AMRSEG0003,NODE_19_length_140769_cov_67.158593,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467803,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467803_AMRSEG0004,NODE_1_length_292266_cov_72.262369,positive,52127-53641,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467803,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467803_AMRSEG0005,NODE_21_length_133808_cov_65.598176,positive,71187-72347,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467803,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467803_AMRSEG0006,NODE_27_length_100948_cov_70.480636,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467803,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467803_AMRSEG0007,NODE_30_length_93967_cov_78.758796,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467803,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467803_AMRSEG0008,NODE_6_length_208097_cov_60.192449,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467804,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR3467804_AMRSEG0001,NODE_11_length_173007_cov_65.984527,negative,9686-10117,100.0,93.52,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467804,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR3467804_AMRSEG0002,NODE_16_length_140615_cov_63.907856,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467804,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR3467804_AMRSEG0003,NODE_19_length_134358_cov_60.743311,positive,52128-53642,100.0,99.87,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467804,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR3467804_AMRSEG0004,NODE_20_length_133808_cov_60.613713,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467804,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR3467804_AMRSEG0005,NODE_22_length_121748_cov_56.587303,negative,20925-21269,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467804,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR3467804_AMRSEG0006,NODE_27_length_100948_cov_66.263002,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467804,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR3467804_AMRSEG0007,NODE_30_length_93967_cov_73.512257,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR3467804,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR3467804_AMRSEG0008,NODE_9_length_175577_cov_66.043432,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:lab evolved,United States of America,2015/6/1,15.0,,
SRR5190900,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR5190900_AMRSEG0001,NODE_14_length_175447_cov_74.764825,positive,5465-6724,100.0,100.0,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190900,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR5190900_AMRSEG0002,NODE_18_length_163267_cov_73.386982,negative,1-377,87.27,93.9,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190900,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5190900_AMRSEG0003,NODE_20_length_140869_cov_72.939172,negative,131814-132500,100.0,84.13,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190900,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR5190900_AMRSEG0004,NODE_23_length_133809_cov_71.578657,positive,71188-72348,100.0,99.91,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190900,smegmatis,1772,APH(3')-IIIa,ARO:3002647,antibiotic inactivation,Campylobacter coli CVM N29710,aminoglycoside antibiotic,APH(3')-IIIa is a plasmid-encoded aminoglycoside phosphotransferase in S. aureus and Enterococcus spp.,SRR5190900_AMRSEG0005,NODE_24_length_129204_cov_71.756034,negative,103647-104441,100.0,99.75,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190900,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5190900_AMRSEG0006,NODE_28_length_100948_cov_72.480022,positive,57701-61186,98.94,81.06,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190900,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR5190900_AMRSEG0007,NODE_2_length_292048_cov_72.870589,negative,238406-239920,100.0,99.87,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190900,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR5190900_AMRSEG0008,NODE_31_length_93967_cov_76.017773,negative,3868-4500,100.0,100.0,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190900,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5190900_AMRSEG0009,NODE_6_length_208096_cov_69.805098,negative,103670-104014,100.0,100.0,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190911,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR5190911_AMRSEG0001,NODE_12_length_182589_cov_64.491700,negative,19267-19698,100.0,93.52,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190911,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR5190911_AMRSEG0002,NODE_15_length_175447_cov_65.093093,negative,168724-169983,100.0,100.0,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190911,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5190911_AMRSEG0003,NODE_20_length_141394_cov_65.263566,positive,8895-9581,100.0,84.13,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190911,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR5190911_AMRSEG0004,NODE_23_length_133809_cov_62.751499,negative,61462-62622,100.0,99.91,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190911,smegmatis,1772,APH(3')-IIIa,ARO:3002647,antibiotic inactivation,Campylobacter coli CVM N29710,aminoglycoside antibiotic,APH(3')-IIIa is a plasmid-encoded aminoglycoside phosphotransferase in S. aureus and Enterococcus spp.,SRR5190911_AMRSEG0005,NODE_24_length_129207_cov_63.122569,negative,103650-104444,100.0,99.75,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190911,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5190911_AMRSEG0006,NODE_28_length_100948_cov_63.114794,negative,39763-43248,98.94,81.06,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190911,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR5190911_AMRSEG0007,NODE_2_length_292000_cov_62.627402,negative,238358-239872,100.0,99.87,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190911,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR5190911_AMRSEG0008,NODE_31_length_93967_cov_66.537932,negative,3868-4500,100.0,100.0,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190911,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5190911_AMRSEG0009,NODE_6_length_208096_cov_61.282830,positive,104083-104427,100.0,100.0,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190926,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR5190926_AMRSEG0001,NODE_12_length_182589_cov_71.525279,positive,162892-163323,100.0,93.52,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190926,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR5190926_AMRSEG0002,NODE_15_length_175447_cov_72.600471,positive,5465-6724,100.0,100.0,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190926,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5190926_AMRSEG0003,NODE_20_length_141394_cov_72.623041,positive,8895-9581,100.0,84.13,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190926,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR5190926_AMRSEG0004,NODE_23_length_133809_cov_68.799687,positive,71188-72348,100.0,99.91,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190926,smegmatis,1772,APH(3')-IIIa,ARO:3002647,antibiotic inactivation,Campylobacter coli CVM N29710,aminoglycoside antibiotic,APH(3')-IIIa is a plasmid-encoded aminoglycoside phosphotransferase in S. aureus and Enterococcus spp.,SRR5190926_AMRSEG0005,NODE_24_length_129204_cov_70.130245,negative,103647-104441,100.0,99.75,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190926,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5190926_AMRSEG0006,NODE_28_length_100948_cov_69.884631,positive,57701-61186,98.94,81.06,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190926,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR5190926_AMRSEG0007,NODE_2_length_292398_cov_71.093605,positive,52128-53642,100.0,99.87,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190926,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR5190926_AMRSEG0008,NODE_31_length_93967_cov_73.940056,negative,3868-4500,100.0,100.0,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5190926,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5190926_AMRSEG0009,NODE_6_length_208096_cov_68.686790,positive,104083-104427,100.0,100.0,Environment,Environment: wild environment,Environment:Wild Environment:soil,New Zealand,2015/3/1,15.0,,
SRR5507164,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR5507164_AMRSEG0001,NODE_13_length_140870_cov_20.273793,negative,131815-132501,100.0,84.13,,,,United States of America,2015/1/1,15.0,,
SRR5507164,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR5507164_AMRSEG0002,NODE_14_length_133808_cov_20.253587,positive,71187-72347,100.0,99.91,,,,United States of America,2015/1/1,15.0,,
SRR5507164,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR5507164_AMRSEG0003,NODE_16_length_126942_cov_18.354456,positive,22929-23273,100.0,100.0,,,,United States of America,2015/1/1,15.0,,
SRR5507164,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR5507164_AMRSEG0004,NODE_18_length_119320_cov_25.859287,positive,114821-115453,100.0,100.0,,,,United States of America,2015/1/1,15.0,,
SRR5507164,smegmatis,1772,APH(3')-Ia,ARO:3002641,antibiotic inactivation,Serratia marcescens,aminoglycoside antibiotic,"APH(3')-Ia is a transposon-encoded aminoglycoside phosphotransferase in E. coli and S. enterica. It is identical at the protein sequence to APH(3')-Ic, an aminoglycoside phosphotransferase encoded by plasmids, transposons and genomic islands in K. pneumoniae, A. baumannii, S. marcescens, Corynebacterium spp., Photobacterium spp. and Citrobacter spp.",SRR5507164_AMRSEG0005,NODE_2_length_203344_cov_23.713835,negative,72692-73505,99.75,99.14,,,,United States of America,2015/1/1,15.0,,
SRR5507164,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR5507164_AMRSEG0006,NODE_35_length_78790_cov_20.332897,positive,4713-5972,100.0,100.0,,,,United States of America,2015/1/1,15.0,,
SRR5507164,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR5507164_AMRSEG0007,NODE_37_length_76992_cov_21.854398,negative,15807-19292,98.94,81.06,,,,United States of America,2015/1/1,15.0,,
SRR5507164,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR5507164_AMRSEG0008,NODE_42_length_58963_cov_21.784890,negative,5321-6835,100.0,99.87,,,,United States of America,2015/1/1,15.0,,
SRR5507164,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR5507164_AMRSEG0009,NODE_55_length_47318_cov_22.988700,negative,19267-19698,100.0,93.52,,,,United States of America,2015/1/1,15.0,,
SRR5507165,smegmatis,1772,TEM-116,ARO:3000979,antibiotic inactivation,Staphylococcus aureus,penam;penem;monobactam;cephalosporin,TEM-116 is a broad-spectrum beta-lactamase found in many species of bacteria.,SRR5507165_AMRSEG0001,NODE_108_length_2792_cov_14.258703,positive,287-1147,100.0,100.0,,,,United States of America,2015/1/1,15.0,,
SRR8294442,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR8294442_AMRSEG0001,NODE_12_length_182590_cov_137.986320,positive,162893-163324,100.0,93.52,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8294442,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR8294442_AMRSEG0002,NODE_15_length_174825_cov_135.957451,negative,168854-170113,100.0,100.0,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8294442,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR8294442_AMRSEG0003,NODE_20_length_141019_cov_135.970941,positive,8520-9206,100.0,84.13,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8294442,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR8294442_AMRSEG0004,NODE_23_length_133808_cov_135.255127,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8294442,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR8294442_AMRSEG0005,NODE_26_length_119320_cov_137.232305,positive,114821-115453,100.0,100.0,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8294442,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR8294442_AMRSEG0006,NODE_29_length_100969_cov_138.242919,positive,57722-61207,98.94,81.06,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8294442,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR8294442_AMRSEG0007,NODE_2_length_292394_cov_139.620201,positive,52128-53642,100.0,99.87,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8294442,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR8294442_AMRSEG0008,NODE_6_length_208096_cov_133.571981,positive,104083-104427,100.0,100.0,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8294949,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR8294949_AMRSEG0001,NODE_14_length_175577_cov_183.503020,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8294949,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR8294949_AMRSEG0002,NODE_18_length_163268_cov_172.599657,positive,162892-163268,87.27,93.9,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8294949,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR8294949_AMRSEG0003,NODE_20_length_140869_cov_168.280954,positive,8370-9056,100.0,84.13,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8294949,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR8294949_AMRSEG0004,NODE_23_length_133808_cov_194.985734,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8294949,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR8294949_AMRSEG0005,NODE_26_length_119320_cov_132.170699,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8294949,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR8294949_AMRSEG0006,NODE_29_length_100969_cov_163.477434,negative,39763-43248,98.94,81.06,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8294949,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR8294949_AMRSEG0007,NODE_2_length_292044_cov_189.290550,negative,238402-239916,100.0,99.87,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8294949,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR8294949_AMRSEG0008,NODE_6_length_208096_cov_173.451861,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8296618,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR8296618_AMRSEG0001,NODE_11_length_182590_cov_130.917908,positive,162893-163324,100.0,93.52,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8296618,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR8296618_AMRSEG0002,NODE_14_length_174823_cov_132.269856,positive,4711-5970,100.0,100.0,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8296618,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR8296618_AMRSEG0003,NODE_19_length_140869_cov_128.095578,positive,8370-9056,100.0,84.13,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8296618,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR8296618_AMRSEG0004,NODE_22_length_133808_cov_132.061101,positive,71187-72347,100.0,99.91,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8296618,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR8296618_AMRSEG0005,NODE_28_length_100969_cov_134.148524,positive,57722-61207,98.94,81.06,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8296618,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR8296618_AMRSEG0006,NODE_2_length_292044_cov_130.837476,negative,238402-239916,100.0,99.87,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8296618,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR8296618_AMRSEG0007,NODE_30_length_93967_cov_126.486678,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8296618,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR8296618_AMRSEG0008,NODE_6_length_208096_cov_126.043570,negative,103670-104014,100.0,100.0,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8297996,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR8297996_AMRSEG0001,NODE_11_length_182590_cov_150.288324,negative,19267-19698,100.0,93.52,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8297996,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR8297996_AMRSEG0002,NODE_14_length_175577_cov_165.168579,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8297996,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR8297996_AMRSEG0003,NODE_19_length_141019_cov_151.532542,positive,8520-9206,100.0,84.13,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8297996,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR8297996_AMRSEG0004,NODE_23_length_133808_cov_167.366668,positive,71187-72347,100.0,99.91,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8297996,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR8297996_AMRSEG0005,NODE_26_length_119320_cov_134.798762,negative,3868-4500,100.0,100.0,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8297996,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR8297996_AMRSEG0006,NODE_29_length_100969_cov_155.652756,positive,57722-61207,98.94,81.06,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8297996,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR8297996_AMRSEG0007,NODE_2_length_292394_cov_167.421888,positive,52128-53642,100.0,99.87,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8297996,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR8297996_AMRSEG0008,NODE_6_length_208096_cov_156.923945,positive,104083-104427,100.0,100.0,Lab,Lab,Lab:mutant strain derived from the Mycobacterium smegmatis MC2 155,Germany,2018/1/1,15.0,,
SRR8589635,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR8589635_AMRSEG0001,NODE_10_length_175447_cov_21.994794,positive,5465-6724,100.0,100.0,Lab,Lab,Lab:Laboratory strain,Russia,2018/11/1,15.0,,
SRR8589635,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR8589635_AMRSEG0002,NODE_12_length_173008_cov_21.074590,positive,162892-163323,100.0,93.52,Lab,Lab,Lab:Laboratory strain,Russia,2018/11/1,15.0,,
SRR8589635,smegmatis,1772,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,SRR8589635_AMRSEG0003,NODE_18_length_140869_cov_21.251182,negative,131814-132500,100.0,84.13,Lab,Lab,Lab:Laboratory strain,Russia,2018/11/1,15.0,,
SRR8589635,smegmatis,1772,Erm(38),ARO:3000601,antibiotic target alteration,Mycolicibacterium smegmatis,streptogramin antibiotic;streptogramin B antibiotic;macrolide antibiotic;streptogramin A antibiotic;lincosamide antibiotic,ErmD confers MLSb phenotype.,SRR8589635_AMRSEG0004,NODE_21_length_133808_cov_20.882328,negative,61462-62622,100.0,99.91,Lab,Lab,Lab:Laboratory strain,Russia,2018/11/1,15.0,,
SRR8589635,smegmatis,1772,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,SRR8589635_AMRSEG0005,NODE_26_length_114942_cov_20.409213,positive,52129-53643,100.0,99.87,Lab,Lab,Lab:Laboratory strain,Russia,2018/11/1,15.0,,
SRR8589635,smegmatis,1772,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",SRR8589635_AMRSEG0006,NODE_29_length_100969_cov_21.018463,positive,57722-61207,98.94,81.06,Lab,Lab,Lab:Laboratory strain,Russia,2018/11/1,15.0,,
SRR8589635,smegmatis,1772,AAC(2')-Id,ARO:3002526,antibiotic inactivation,Mycolicibacterium smegmatis MC2 155,aminoglycoside antibiotic,AAC(2')-Id is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium smegmatis.,SRR8589635_AMRSEG0007,NODE_30_length_93967_cov_21.098100,positive,89468-90100,100.0,100.0,Lab,Lab,Lab:Laboratory strain,Russia,2018/11/1,15.0,,
SRR8589635,smegmatis,1772,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,SRR8589635_AMRSEG0008,NODE_4_length_208096_cov_20.614225,positive,104083-104427,100.0,100.0,Lab,Lab,Lab:Laboratory strain,Russia,2018/11/1,15.0,,
SRR8594817,smegmatis,1772,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,SRR8594817_AMRSEG0001,NODE_11_length_175577_cov_49.789960,positive,5465-6724,100.0,100.0,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2018/2/1,15.0,,
SRR8594817,smegmatis,1772,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,SRR8594817_AMRSEG0002,NODE_13_length_172378_cov_48.819505,negative,9056-9487,100.0,93.52,Homo sapiens,Homo sapiens,Homo sapiens_no_further_detail,Russia,2018/2/1,15.0,,