strain_accession,species_name,species_id,gene_name,card_accession,mechanism,AMR_gene_ref_strain,card_drug_class,definition,amr_seqid,contig,strand,position,coverage,identity,host,source,source_detail,country,date,MLST,subspecies_id,subspecies_name
GCF_001756795.1,syngnathidarum,1908205,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_001756795.1_AMRSEG0001,NZ_MAIH01000085.1,positive,10837-12342,99.21,80.72,,,,United States of America,2016/10/11,,,
GCF_001756795.1,syngnathidarum,1908205,tap,ARO:3000343,antibiotic efflux,Mycolicibacterium fortuitum,tetracycline antibiotic,"Efflux pump proteins contained within Mycobacterial genomes which confer resistance to a number of different antibiotics including aminoglycosides, and tetracyclines.",GCF_001756795.1_AMRSEG0002,NZ_MAIH01000098.1,positive,4601-5813,98.54,88.55,,,,United States of America,2016/10/11,,,
GCF_001756795.1,syngnathidarum,1908205,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_001756795.1_AMRSEG0003,NZ_MAIH01000109.1,negative,55257-55943,100.0,85.01,,,,United States of America,2016/10/11,,,
GCF_001756795.1,syngnathidarum,1908205,blaF,ARO:3003562,antibiotic inactivation,Mycolicibacterium fortuitum,penam,Class A beta-lactamase found in Mycolicibacterium fortuitum.,GCF_001756795.1_AMRSEG0004,NZ_MAIH01000130.1,positive,193558-194480,100.0,83.53,,,,United States of America,2016/10/11,,,
GCF_001756795.1,syngnathidarum,1908205,AAC(2')-Ib,ARO:3002524,antibiotic inactivation,Mycolicibacterium fortuitum,aminoglycoside antibiotic,AAC(2')-Ib is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium fortuitum and A. baumannii.,GCF_001756795.1_AMRSEG0005,NZ_MAIH01000134.1,positive,12301-12915,100.0,82.28,,,,United States of America,2016/10/11,,,
GCF_001756795.1,syngnathidarum,1908205,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_001756795.1_AMRSEG0006,NZ_MAIH01000136.1,negative,36010-36439,99.54,81.63,,,,United States of America,2016/10/11,,,
GCF_001756795.1,syngnathidarum,1908205,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_001756795.1_AMRSEG0007,NZ_MAIH01000152.1,negative,88149-88488,98.55,91.18,,,,United States of America,2016/10/11,,,
GCF_001853525.1,syngnathidarum,1908205,lfrA,ARO:3003967,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,fluoroquinolone antibiotic,lfrA is involved in the active efflux of quinolones and is found in Mycobacteroides abscessus.,GCF_001853525.1_AMRSEG0001,NZ_MLHV01000003.1,negative,87176-88681,99.21,80.92,Animal,Homo sapiens,Animal:tail,United States of America,2016/10/26,462.0,,
GCF_001853525.1,syngnathidarum,1908205,blaF,ARO:3003562,antibiotic inactivation,Mycolicibacterium fortuitum,penam,Class A beta-lactamase found in Mycolicibacterium fortuitum.,GCF_001853525.1_AMRSEG0002,NZ_MLHV01000004.1,negative,145398-146282,100.0,87.91,Animal,Homo sapiens,Animal:tail,United States of America,2016/10/26,462.0,,
GCF_001853525.1,syngnathidarum,1908205,rpoB2,ARO:3000501,antibiotic target alteration,Nocardia farcinica IFM 10152,rifamycin antibiotic,"Due to gene duplication, the genomes of Nocardia species include both rifampin-sensitive beta-subunit of RNA polymerase (rpoB) and rifampin-resistant beta-subunit of RNA polymerase (rpoB2) genes, with ~88% similarity between the two gene products. Expression of the rpoB2 variant results in replacement of rifampin sensitivity with rifampin resistance.",GCF_001853525.1_AMRSEG0003,NZ_MLHV01000005.1,negative,245239-248727,98.85,80.58,Animal,Homo sapiens,Animal:tail,United States of America,2016/10/26,462.0,,
GCF_001853525.1,syngnathidarum,1908205,AAC(2')-Ib,ARO:3002524,antibiotic inactivation,Mycolicibacterium fortuitum,aminoglycoside antibiotic,AAC(2')-Ib is a chromosomal-encoded aminoglycoside acetyltransferase in Mycolicibacterium fortuitum and A. baumannii.,GCF_001853525.1_AMRSEG0004,NZ_MLHV01000009.1,positive,187049-187663,100.0,81.95,Animal,Homo sapiens,Animal:tail,United States of America,2016/10/26,462.0,,
GCF_001853525.1,syngnathidarum,1908205,tap,ARO:3000343,antibiotic efflux,Mycolicibacterium fortuitum,tetracycline antibiotic,"Efflux pump proteins contained within Mycobacterial genomes which confer resistance to a number of different antibiotics including aminoglycosides, and tetracyclines.",GCF_001853525.1_AMRSEG0005,NZ_MLHV01000014.1,positive,4692-5904,98.54,88.3,Animal,Homo sapiens,Animal:tail,United States of America,2016/10/26,462.0,,
GCF_001853525.1,syngnathidarum,1908205,tet(V),ARO:3000181,antibiotic efflux,Mycolicibacterium smegmatis MC2 155,tetracycline antibiotic,TetV is a tetracycline efflux protein that has been found in Mycolicibacterium smegmatis and Mycolicibacterium fortuitum.,GCF_001853525.1_AMRSEG0006,NZ_MLHV01000014.1,positive,150224-151460,97.54,83.05,Animal,Homo sapiens,Animal:tail,United States of America,2016/10/26,462.0,,
GCF_001853525.1,syngnathidarum,1908205,mtrA,ARO:3000816,antibiotic efflux,Mycobacterium tuberculosis H37Rv,penam;macrolide antibiotic,MtrA is a transcriptional activator of the MtrCDE multidrug efflux pump of Neisseria gonorrhoeae.,GCF_001853525.1_AMRSEG0007,NZ_MLHV01000026.1,positive,24086-24772,100.0,85.01,Animal,Homo sapiens,Animal:tail,United States of America,2016/10/26,462.0,,
GCF_001853525.1,syngnathidarum,1908205,RbpA,ARO:3000245,antibiotic target protection,Mycolicibacterium smegmatis MC2 155,rifamycin antibiotic,RNA-polymerase binding protein which confers resistance to rifampin.,GCF_001853525.1_AMRSEG0008,NZ_MLHV01000027.1,negative,60559-60898,98.55,91.18,Animal,Homo sapiens,Animal:tail,United States of America,2016/10/26,462.0,,
GCF_001853525.1,syngnathidarum,1908205,arr-1,ARO:3002846,antibiotic inactivation,Mycolicibacterium smegmatis,rifamycin antibiotic,arr-1 is a chromosome-encoded ribosyltransferase found in Mycolicibacterium smegmatis.,GCF_001853525.1_AMRSEG0009,NZ_MLHV01000040.1,positive,21454-21883,99.54,81.86,Animal,Homo sapiens,Animal:tail,United States of America,2016/10/26,462.0,,