Comparative study on the response mechanism of Platycodon grandiflorus to heavy ion beam and X-ray radiation indicated by transcriptome and proteomic analysis
| Title | Comparative study on the response mechanism of Platycodon grandiflorus to heavy ion beam and X-ray radiation indicated by transcriptome and proteomic analysis |
|---|---|
| Description | Heavy ion beam (HIB) and X-ray (XR) are widely used physical agent to induce mutations and create novel germplasm. However, the molecular mechanism underlying response pattern to different types of radiation in medicinal plants remain unclear. Here, the seedling of Platycodon grandiflorus were irradiated with HIB and XR, the samples harvested from the treatment groups that caused similar biological effects (15 Gy HIB and 20 Gy XR) were used for RNA-Seq and data independent acquisition (DIA) protein quantitative analysis. |
| Organism | Platycodon grandiflorus |
| Data Type | - |
| Data Accessibility | Open-access |
| BioProject | PRJCA008600 |
| Release Date | 2022-03-12 |
| Submitter | Libin Zhou (libinzhou@impcas.ac.cn) |
| Organization | Institute of Modern Physics, Chinese Academy of Sciences |
| Submission Date | 2022-03-11 |
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| File ID | File Title | Number/Samples | File Type | File Size | File Suffix | Download Times | Download |
|---|---|---|---|---|---|---|---|
| OMIX001025-20-01 | Samples_24 h after heavy ion beam irradiation | 3 | Transcriptomic | 15.07 GB | zip | 0 | |
| OMIX001025-20-02 | Samples_24 h after X ray irradiation | 3 | Transcriptomic | 14.99 GB | zip | 0 | |
| OMIX001025-20-03 | Samples_6 h no irradiation for heavy ion beam | 3 | Transcriptomic | 15 GB | zip | 0 | |
| OMIX001025-20-04 | Samples_6 h after X ray irradiation | 3 | Transcriptomic | 15 GB | zip | 0 | |
| OMIX001025-20-05 | Samples_24 h no irradiation for X ray | 3 | Transcriptomic | 15.13 GB | zip | 0 | |
| OMIX001025-20-06 | Samples_24 h no irradiation for heavy ion beam | 3 | Transcriptomic | 14.98 GB | zip | 0 | |
| OMIX001025-20-07 | Samples_6 h no irradiation for X ray | 3 | Transcriptomic | 14.97 GB | zip | 0 | |
| OMIX001025-20-08 | Samples_6 h after heavy ion beam irradiation | 3 | Transcriptomic | 15.1 GB | zip | 0 | |
| OMIX001025-10-09 | DDA_Raw_1 | 4 | Proteomic | 2.19 GB | tar | 0 | |
| OMIX001025-10-10 | DDA_Raw_2 | 4 | Proteomic | 2.12 GB | tar | 0 | |
| OMIX001025-10-11 | DDA_Raw_3 | 4 | Proteomic | 1.06 GB | tar | 0 | |
| OMIX001025-10-12 | DIA_Raw_4 | 4 | Proteomic | 11.63 GB | tar | 0 | |
| OMIX001025-10-13 | DIA_Raw_1 | 4 | Proteomic | 12.75 GB | tar | 0 | |
| OMIX001025-10-14 | DIA_Raw_6 | 4 | Proteomic | 10.57 GB | tar | 0 | |
| OMIX001025-10-15 | DIA_Raw_2 | 4 | Proteomic | 12.77 GB | tar | 0 | |
| OMIX001025-10-16 | DIA_Raw_3 | 4 | Proteomic | 12.05 GB | tar | 0 | |
| OMIX001025-10-17 | DIA_Raw_5 | 4 | Proteomic | 10.7 GB | tar | 0 |