Analysis of MGE Transcriptomes with or without Ctnnb1 knockout in human through RNA Sequencing
| Title | Analysis of MGE Transcriptomes with or without Ctnnb1 knockout in human through RNA Sequencing |
|---|---|
| Description | mRNA profiles of MGE cells with or without Ctnnb1 knockout were generated by RNA sequencing, using Illumina Hiseq 2500 platform.Total RNA from each sample was used to prepare the library. Then the libraries were sequenced at 50bp single read on an Illumina HiSeq 2500 platform. Sequencing reads from each sample were mapped to the human reference genomes (hg38 version) by using TopHat v2.1.1. The mapped reads were further analyzed by cufflinks v1.3.0 and the expression levels for each transcript were quantified as Fragments Per Kilobase of transcript per Million mapped reads (FPKM). |
| Organism | Homo sapiens |
| Data Type | Expression Profiling by NGS |
| Data Accessibility | Controlled-access |
| BioProject | PRJCA011156 |
| Release Date | 2022-10-14 |
| Submitter | xiaoqing zhang (xqzhang@tongji.edu.cn) |
| Organization | Tongji University |
| Submission Date | 2022-10-13 |
The data cannot be downloaded as it has not yet been registered in the Human Genetic Resource Management Platform of MOST.
| File ID | File Title | Number/Samples | File Type | File Size | File Suffix | Download Times | Download |
|---|---|---|---|---|---|---|---|
| OMIX002053-01 | hMGE_RNA_seq_normalized_counts | 1 | Expression Profiling by NGS | 6.1 MB | xlsx | 0 | Unavailable |