OMIX005759

1Summary

Title	Single-cell chromatin accessibility analysis reveals the epigenetic basis and signature transcription factors for the molecular subtypes of colorectal cancers
Description	To comprehensively profile the epigenetic landscape of CRC at single-cell resolution, we conducted scATAC-Seq analysis across a spectrum that included healthy colon tissue, precancerous adenoma, and CRC samples from 29 patients.
Organism	Homo sapiens
Data Type	Chromatin Accessibility Profiling
Data Accessibility	Open-access
BioProject	PRJCA005414
Release Date	2024-08-06
Submitter	Fuchou Tang (tangfuchou@pku.edu.cn)
Organization	Peking University
Submission Date	2024-01-27

2Files & Download

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File ID	File Title	Number/Samples	File Type	File Size	File Suffix	Download
OMIX005759-01	Fragment (bed) file of Tn5 insertion in P03	1	Chromatin Accessibility Profiling	192.25 MB	tsv	FTP HTTPs
OMIX005759-02	Fragment (bed) file of Tn5 insertion in P01	1	Chromatin Accessibility Profiling	277.26 MB	tsv	FTP HTTPs
OMIX005759-03	Fragment (bed) file of Tn5 insertion in P27	1	Chromatin Accessibility Profiling	407.79 MB	tsv	FTP HTTPs
OMIX005759-04	Fragment (bed) file of Tn5 insertion in P10	1	Chromatin Accessibility Profiling	1.28 GB	tsv	FTP HTTPs
OMIX005759-05	Fragment (bed) file of Tn5 insertion in P05	1	Chromatin Accessibility Profiling	221.4 MB	tsv	FTP HTTPs
OMIX005759-06	Fragment (bed) file of Tn5 insertion in P24	1	Chromatin Accessibility Profiling	784.92 MB	tsv	FTP HTTPs
OMIX005759-07	Fragment (bed) file of Tn5 insertion in P12	1	Chromatin Accessibility Profiling	441.78 MB	tsv	FTP HTTPs
OMIX005759-08	Fragment (bed) file of Tn5 insertion in P28	1	Chromatin Accessibility Profiling	1006.22 MB	tsv	FTP HTTPs
OMIX005759-09	Fragment (bed) file of Tn5 insertion in P23	1	Chromatin Accessibility Profiling	629.77 MB	tsv	FTP HTTPs
OMIX005759-10	Fragment (bed) file of Tn5 insertion in P29	1	Chromatin Accessibility Profiling	577.1 MB	tsv	FTP HTTPs
OMIX005759-11	Fragment (bed) file of Tn5 insertion in P26	1	Chromatin Accessibility Profiling	1 GB	tsv	FTP HTTPs
OMIX005759-12	Fragment (bed) file of Tn5 insertion in P06	1	Chromatin Accessibility Profiling	233.73 MB	tsv	FTP HTTPs
OMIX005759-13	Fragment (bed) file of Tn5 insertion in P04	1	Chromatin Accessibility Profiling	330.65 MB	tsv	FTP HTTPs
OMIX005759-14	Fragment (bed) file of Tn5 insertion in P15	1	Chromatin Accessibility Profiling	759.17 MB	tsv	FTP HTTPs
OMIX005759-15	Fragment (bed) file of Tn5 insertion in P14	1	Chromatin Accessibility Profiling	507.27 MB	tsv	FTP HTTPs
OMIX005759-16	Fragment (bed) file of Tn5 insertion in P13	1	Chromatin Accessibility Profiling	576.18 MB	tsv	FTP HTTPs
OMIX005759-17	Fragment (bed) file of Tn5 insertion in P11	1	Chromatin Accessibility Profiling	827.5 MB	tsv	FTP HTTPs
OMIX005759-18	Fragment (bed) file of Tn5 insertion in P25	1	Chromatin Accessibility Profiling	611.76 MB	tsv	FTP HTTPs
OMIX005759-19	Fragment (bed) file of Tn5 insertion in P22	1	Chromatin Accessibility Profiling	896.68 MB	tsv	FTP HTTPs
OMIX005759-20	Fragment (bed) file of Tn5 insertion in P17	1	Chromatin Accessibility Profiling	422.09 MB	tsv	FTP HTTPs
OMIX005759-21	Fragment (bed) file of Tn5 insertion in P21	1	Chromatin Accessibility Profiling	316.81 MB	tsv	FTP HTTPs
OMIX005759-22	Fragment (bed) file of Tn5 insertion in P07	1	Chromatin Accessibility Profiling	201.07 MB	tsv	FTP HTTPs
OMIX005759-23	Fragment (bed) file of Tn5 insertion in P18	1	Chromatin Accessibility Profiling	620.94 MB	tsv	FTP HTTPs
OMIX005759-24	Fragment (bed) file of Tn5 insertion in P02	1	Chromatin Accessibility Profiling	279.76 MB	tsv	FTP HTTPs
OMIX005759-25	Fragment (bed) file of Tn5 insertion in P16	1	Chromatin Accessibility Profiling	302.28 MB	tsv	FTP HTTPs
OMIX005759-26	Fragment (bed) file of Tn5 insertion in P19	1	Chromatin Accessibility Profiling	812.07 MB	tsv	FTP HTTPs
OMIX005759-27	Fragment (bed) file of Tn5 insertion in P20	1	Chromatin Accessibility Profiling	109.63 MB	tsv	FTP HTTPs
OMIX005759-28	Fragment (bed) file of Tn5 insertion in P09	1	Chromatin Accessibility Profiling	601.43 MB	tsv	FTP HTTPs
OMIX005759-29	Fragment (bed) file of Tn5 insertion in P08	1	Chromatin Accessibility Profiling	979.96 MB	tsv	FTP HTTPs

3Relevant Publications

Paper Title	Journal Name	Publish Time	Accession	Citing Type
Single-cell chromatin accessibility analysis reveals the epigenetic basis and signature transcription factors for the molecular subtypes of colorectal cancers	Cancer Discovery	2024-04	OMIX005759	Deposit

Registration number	2024BAT00096
Backup number