Single-cell chromatin accessibility analysis reveals the epigenetic basis and signature transcription factors for the molecular subtypes of colorectal cancers
| Title | Single-cell chromatin accessibility analysis reveals the epigenetic basis and signature transcription factors for the molecular subtypes of colorectal cancers |
|---|---|
| Description | To comprehensively profile the epigenetic landscape of CRC at single-cell resolution, we conducted scATAC-Seq analysis across a spectrum that included healthy colon tissue, precancerous adenoma, and CRC samples from 29 patients. |
| Organism | Homo sapiens |
| Data Type | Chromatin Accessibility Profiling by NGS |
| Data Accessibility | Open-access |
| BioProject | PRJCA005414 |
| Release Date | 2024-08-06 |
| Submitter | Fuchou Tang (tangfuchou@pku.edu.cn) |
| Organization | Peking University |
| Submission Date | 2024-01-27 |
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| File ID | File Title | Number/Samples | File Type | File Size | File Suffix | Download Times | Download |
|---|---|---|---|---|---|---|---|
| OMIX005759-01 | Fragment (bed) file of Tn5 insertion in P03 | 1 | Chromatin Accessibility Profiling by NGS | 192.25 MB | tsv | 0 | |
| OMIX005759-02 | Fragment (bed) file of Tn5 insertion in P01 | 1 | Chromatin Accessibility Profiling by NGS | 277.26 MB | tsv | 0 | |
| OMIX005759-03 | Fragment (bed) file of Tn5 insertion in P27 | 1 | Chromatin Accessibility Profiling by NGS | 407.79 MB | tsv | 0 | |
| OMIX005759-04 | Fragment (bed) file of Tn5 insertion in P10 | 1 | Chromatin Accessibility Profiling by NGS | 1.28 GB | tsv | 0 | |
| OMIX005759-05 | Fragment (bed) file of Tn5 insertion in P05 | 1 | Chromatin Accessibility Profiling by NGS | 221.4 MB | tsv | 0 | |
| OMIX005759-06 | Fragment (bed) file of Tn5 insertion in P24 | 1 | Chromatin Accessibility Profiling by NGS | 784.92 MB | tsv | 0 | |
| OMIX005759-07 | Fragment (bed) file of Tn5 insertion in P12 | 1 | Chromatin Accessibility Profiling by NGS | 441.78 MB | tsv | 0 | |
| OMIX005759-08 | Fragment (bed) file of Tn5 insertion in P28 | 1 | Chromatin Accessibility Profiling by NGS | 1006.22 MB | tsv | 0 | |
| OMIX005759-09 | Fragment (bed) file of Tn5 insertion in P23 | 1 | Chromatin Accessibility Profiling by NGS | 629.77 MB | tsv | 0 | |
| OMIX005759-10 | Fragment (bed) file of Tn5 insertion in P29 | 1 | Chromatin Accessibility Profiling by NGS | 577.1 MB | tsv | 0 | |
| OMIX005759-11 | Fragment (bed) file of Tn5 insertion in P26 | 1 | Chromatin Accessibility Profiling by NGS | 1 GB | tsv | 0 | |
| OMIX005759-12 | Fragment (bed) file of Tn5 insertion in P06 | 1 | Chromatin Accessibility Profiling by NGS | 233.73 MB | tsv | 0 | |
| OMIX005759-13 | Fragment (bed) file of Tn5 insertion in P04 | 1 | Chromatin Accessibility Profiling by NGS | 330.65 MB | tsv | 0 | |
| OMIX005759-14 | Fragment (bed) file of Tn5 insertion in P15 | 1 | Chromatin Accessibility Profiling by NGS | 759.17 MB | tsv | 0 | |
| OMIX005759-15 | Fragment (bed) file of Tn5 insertion in P14 | 1 | Chromatin Accessibility Profiling by NGS | 507.27 MB | tsv | 0 | |
| OMIX005759-16 | Fragment (bed) file of Tn5 insertion in P13 | 1 | Chromatin Accessibility Profiling by NGS | 576.18 MB | tsv | 0 | |
| OMIX005759-17 | Fragment (bed) file of Tn5 insertion in P11 | 1 | Chromatin Accessibility Profiling by NGS | 827.5 MB | tsv | 0 | |
| OMIX005759-18 | Fragment (bed) file of Tn5 insertion in P25 | 1 | Chromatin Accessibility Profiling by NGS | 611.76 MB | tsv | 0 | |
| OMIX005759-19 | Fragment (bed) file of Tn5 insertion in P22 | 1 | Chromatin Accessibility Profiling by NGS | 896.68 MB | tsv | 0 | |
| OMIX005759-20 | Fragment (bed) file of Tn5 insertion in P17 | 1 | Chromatin Accessibility Profiling by NGS | 422.09 MB | tsv | 0 | |
| OMIX005759-21 | Fragment (bed) file of Tn5 insertion in P21 | 1 | Chromatin Accessibility Profiling by NGS | 316.81 MB | tsv | 0 | |
| OMIX005759-22 | Fragment (bed) file of Tn5 insertion in P07 | 1 | Chromatin Accessibility Profiling by NGS | 201.07 MB | tsv | 0 | |
| OMIX005759-23 | Fragment (bed) file of Tn5 insertion in P18 | 1 | Chromatin Accessibility Profiling by NGS | 620.94 MB | tsv | 0 | |
| OMIX005759-24 | Fragment (bed) file of Tn5 insertion in P02 | 1 | Chromatin Accessibility Profiling by NGS | 279.76 MB | tsv | 0 | |
| OMIX005759-25 | Fragment (bed) file of Tn5 insertion in P16 | 1 | Chromatin Accessibility Profiling by NGS | 302.28 MB | tsv | 0 | |
| OMIX005759-26 | Fragment (bed) file of Tn5 insertion in P19 | 1 | Chromatin Accessibility Profiling by NGS | 812.07 MB | tsv | 0 | |
| OMIX005759-27 | Fragment (bed) file of Tn5 insertion in P20 | 1 | Chromatin Accessibility Profiling by NGS | 109.63 MB | tsv | 0 | |
| OMIX005759-28 | Fragment (bed) file of Tn5 insertion in P09 | 1 | Chromatin Accessibility Profiling by NGS | 601.43 MB | tsv | 0 | |
| OMIX005759-29 | Fragment (bed) file of Tn5 insertion in P08 | 1 | Chromatin Accessibility Profiling by NGS | 979.96 MB | tsv | 0 |